RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 PVALBP20472 110 aaPredicted RBP9.97□□□□□ -0.81
USP4-206ENST00000461553 CAV2P51636 162 aa9.97□□□□□ -0.81
USP4-206ENST00000461553 HIST1H1AQ02539 215 aaPredicted RBP9.97□□□□□ -0.81
USP4-206ENST00000461553 LCN15Q6UWW0 184 aa9.97□□□□□ -0.81
USP4-206ENST00000461553 SEC22CQ9BRL7 303 aa9.97□□□□□ -0.81
USP4-206ENST00000461553 CXCL3P19876 107 aa9.96□□□□□ -0.82
USP4-206ENST00000461553 S100A10P60903 97 aa9.96□□□□□ -0.82
USP4-206ENST00000461553 ARL16Q0P5N6 197 aa9.96□□□□□ -0.82
USP4-206ENST00000461553 LINC00305Q7Z4B0 112 aa9.96□□□□□ -0.82
USP4-206ENST00000461553 BAP18Q8IXM2 172 aa9.96□□□□□ -0.82
USP4-206ENST00000461553 C12orf45Q8N5I9 185 aaPredicted RBP9.96□□□□□ -0.82
USP4-206ENST00000461553 MGST2Q99735 147 aa9.96□□□□□ -0.82
USP4-206ENST00000461553 SLC50A1Q9BRV3 221 aa9.96□□□□□ -0.82
USP4-206ENST00000461553 PPP1R14DQ9NXH3 145 aa9.96□□□□□ -0.82
USP4-206ENST00000461553 FAT2Q9NYQ8 4349 aa9.96□□□□□ -0.82
USP4-206ENST00000461553 FAM240BA0A1B0GVZ2 78 aa9.95□□□□□ -0.82
USP4-206ENST00000461553 H2AFB2P0C5Z0 115 aa9.95□□□□□ -0.82
USP4-206ENST00000461553 HTN3P15516 51 aa9.95□□□□□ -0.82
USP4-206ENST00000461553 B2MP61769 119 aa9.95□□□□□ -0.82
USP4-206ENST00000461553 DAD1P61803 113 aa9.95□□□□□ -0.82
USP4-206ENST00000461553 RHOBP62745 196 aa9.95□□□□□ -0.82
USP4-206ENST00000461553 RAB31Q13636 194 aa9.95□□□□□ -0.82
USP4-206ENST00000461553 OXA1LQ15070 435 aa9.95□□□□□ -0.82
USP4-206ENST00000461553 MZT2BQ6NZ67 158 aa9.95□□□□□ -0.82
USP4-206ENST00000461553 PATE2Q6UY27 113 aa9.95□□□□□ -0.82
USP4-206ENST00000461553 BPIFA4PQ86YQ2 179 aa9.95□□□□□ -0.82
USP4-206ENST00000461553 OR8A1Q8NGG7 326 aa9.95□□□□□ -0.82
USP4-206ENST00000461553 FAM210BQ96KR6 192 aa9.95□□□□□ -0.82
USP4-206ENST00000461553 C2orf50Q96LR7 162 aa9.95□□□□□ -0.82
USP4-206ENST00000461553 NACAE9PAV3 2078 aa9.94□□□□□ -0.82
USP4-206ENST00000461553 UBE2L5PA0A1B0GUS4 154 aa9.94□□□□□ -0.82
USP4-206ENST00000461553 CRXO43186 299 aaPredicted RBP9.94□□□□□ -0.82
USP4-206ENST00000461553 CST7O76096 145 aa9.94□□□□□ -0.82
USP4-206ENST00000461553 CAMLGP49069 296 aa9.94□□□□□ -0.82
USP4-206ENST00000461553 PSG3Q16557 428 aa9.94□□□□□ -0.82
USP4-206ENST00000461553 C10orf113Q5VZT2 155 aa9.94□□□□□ -0.82
USP4-206ENST00000461553 Q6ZRG5 221 aa9.94□□□□□ -0.82
USP4-206ENST00000461553 STX12Q86Y82 276 aa9.94□□□□□ -0.82
USP4-206ENST00000461553 UBE2DNLQ8IWF7 75 aa9.94□□□□□ -0.82
USP4-206ENST00000461553 S100ZQ8WXG8 99 aa9.94□□□□□ -0.82
USP4-206ENST00000461553 UQCC1Q9NVA1 299 aa9.94□□□□□ -0.82
USP4-206ENST00000461553 DNAH17Q9UFH2 4485 aa9.94□□□□□ -0.82
USP4-206ENST00000461553 TRAV12-2A0A075B6T6 113 aa9.93□□□□□ -0.82
USP4-206ENST00000461553 FAM24AA6NFZ4 105 aa9.93□□□□□ -0.82
USP4-206ENST00000461553 MRPS12O15235 138 aaKnown RBP9.93□□□□□ -0.82
USP4-206ENST00000461553 BAXQ07812 192 aa9.93□□□□□ -0.82
USP4-206ENST00000461553 LINC00299Q6ZSB3 139 aa9.93□□□□□ -0.82
USP4-206ENST00000461553 NRARPQ7Z6K4 114 aa9.93□□□□□ -0.82
USP4-206ENST00000461553 TMEM256Q8N2U0 113 aa9.93□□□□□ -0.82
USP4-206ENST00000461553 POM121L12Q8N7R1 296 aa9.93□□□□□ -0.82
USP4-206ENST00000461553 RPUSD4Q96CM3 377 aaKnown RBP9.93□□□□□ -0.82
USP4-206ENST00000461553 LYRM2Q9NU23 88 aaPredicted RBP9.93□□□□□ -0.82
USP4-206ENST00000461553 LYRM9A8MSI8 78 aa9.92□□□□□ -0.82
USP4-206ENST00000461553 ZNF705GA8MUZ8 300 aaPredicted RBP9.92□□□□□ -0.82
USP4-206ENST00000461553 TSPOP30536 169 aa9.92□□□□□ -0.82
USP4-206ENST00000461553 SULT1A1P50225 295 aa9.92□□□□□ -0.82
USP4-206ENST00000461553 HBG1P69891 147 aa9.92□□□□□ -0.82
USP4-206ENST00000461553 HBG2P69892 147 aa9.92□□□□□ -0.82
USP4-206ENST00000461553 OPCMLQ14982 345 aa9.92□□□□□ -0.82
USP4-206ENST00000461553 OR1L4Q8NGR5 311 aa9.92□□□□□ -0.82
USP4-206ENST00000461553 ENKURQ8TC29 256 aa9.92□□□□□ -0.82
USP4-206ENST00000461553 TMEM37Q8WXS4 190 aa9.92□□□□□ -0.82
USP4-206ENST00000461553 PFDN5Q99471 154 aa9.92□□□□□ -0.82
USP4-206ENST00000461553 C11orf1Q9H5F2 150 aa9.92□□□□□ -0.82
USP4-206ENST00000461553 ZNF331Q9NQX6 463 aaPredicted RBP9.92□□□□□ -0.82
USP4-206ENST00000461553 WDR83OSQ9Y284 106 aa9.92□□□□□ -0.82
USP4-206ENST00000461553 PKHD1P08F94 4074 aa9.92□□□□□ -0.82
USP4-206ENST00000461553 SLC17A3O00476 420 aa9.91□□□□□ -0.82
USP4-206ENST00000461553 SNRPCP09234 159 aaKnown RBP9.91□□□□□ -0.82
USP4-206ENST00000461553 CDKN1BP46527 198 aa9.91□□□□□ -0.82
USP4-206ENST00000461553 ASAH1Q13510 395 aa9.91□□□□□ -0.82
USP4-206ENST00000461553 RAB32Q13637 225 aa9.91□□□□□ -0.82
USP4-206ENST00000461553 MORN5Q5VZ52 161 aa9.91□□□□□ -0.82
USP4-206ENST00000461553 MIC13Q5XKP0 118 aa9.91□□□□□ -0.82
USP4-206ENST00000461553 LINC01587Q99440 93 aa9.91□□□□□ -0.82
USP4-206ENST00000461553 PLA2G2EQ9NZK7 142 aa9.91□□□□□ -0.82
USP4-206ENST00000461553 PXMP4Q9Y6I8 212 aa9.91□□□□□ -0.82
USP4-206ENST00000461553 IGSF23A1L1A6 192 aa9.9□□□□□ -0.82
USP4-206ENST00000461553 H3BTX0 84 aa9.9□□□□□ -0.82
USP4-206ENST00000461553 IGLC2P0DOY2 106 aa9.9□□□□□ -0.82
USP4-206ENST00000461553 PRB4P10163 310 aaPredicted RBP9.9□□□□□ -0.82
USP4-206ENST00000461553 S100A11P31949 105 aa9.9□□□□□ -0.82
USP4-206ENST00000461553 VWC2Q2TAL6 325 aa9.9□□□□□ -0.82
USP4-206ENST00000461553 TMEM252Q8N6L7 170 aa9.9□□□□□ -0.82
USP4-206ENST00000461553 OR10J6PQ8NGY7 276 aa9.9□□□□□ -0.82
USP4-206ENST00000461553 C16orf74Q96GX8 76 aa9.9□□□□□ -0.82
USP4-206ENST00000461553 GPN1Q9HCN4 374 aaPredicted RBP9.9□□□□□ -0.82
USP4-206ENST00000461553 DNAJC4Q9NNZ3 241 aa9.9□□□□□ -0.82
USP4-206ENST00000461553 FGF7P21781 194 aa9.89□□□□□ -0.83
USP4-206ENST00000461553 TAS2R60P59551 318 aa9.89□□□□□ -0.83
USP4-206ENST00000461553 GUK1Q16774 197 aa9.89□□□□□ -0.83
USP4-206ENST00000461553 TMEM88Q6PEY1 159 aa9.89□□□□□ -0.83
USP4-206ENST00000461553 LINC00336Q6ZUF6 198 aa9.89□□□□□ -0.83
USP4-206ENST00000461553 SLC39A9Q9NUM3 307 aa9.89□□□□□ -0.83
USP4-206ENST00000461553 HERC2O95714 4834 aa9.89□□□□□ -0.83
USP4-206ENST00000461553 PRM2P04554 102 aa9.88□□□□□ -0.83
USP4-206ENST00000461553 DEFB130BP0DP73 79 aa9.88□□□□□ -0.83
USP4-206ENST00000461553 DEFB130AP0DP74 79 aa9.88□□□□□ -0.83
USP4-206ENST00000461553 HTN1P15515 57 aa9.88□□□□□ -0.83
USP4-206ENST00000461553 RPL29P47914 159 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms