RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 FLVCR2Q9UPI3 526 aa10.3□□□□□ -0.76
SMPD4-216ENST00000461187 NBDYA0A0U1RRE5 68 aa10.29□□□□□ -0.76
SMPD4-216ENST00000461187 CBY3A6NI87 242 aa10.29□□□□□ -0.76
SMPD4-216ENST00000461187 FNDC10F2Z333 226 aa10.29□□□□□ -0.76
SMPD4-216ENST00000461187 K7EPK0 472 aa10.29□□□□□ -0.76
SMPD4-216ENST00000461187 NDUFB6O95139 128 aa10.29□□□□□ -0.76
SMPD4-216ENST00000461187 NUDT3O95989 172 aa10.29□□□□□ -0.76
SMPD4-216ENST00000461187 ATP5G1P05496 136 aa10.29□□□□□ -0.76
SMPD4-216ENST00000461187 METTL15P1P0C7V9 234 aa10.29□□□□□ -0.76
SMPD4-216ENST00000461187 ATP5G3P48201 142 aa10.29□□□□□ -0.76
SMPD4-216ENST00000461187 TAS2R60P59551 318 aa10.29□□□□□ -0.76
SMPD4-216ENST00000461187 TNP2Q05952 138 aa10.29□□□□□ -0.76
SMPD4-216ENST00000461187 SRRQ9GZT4 340 aa10.29□□□□□ -0.76
SMPD4-216ENST00000461187 PPP1R14DQ9NXH3 145 aa10.29□□□□□ -0.76
SMPD4-216ENST00000461187 OR4E1P0C645 316 aa10.28□□□□□ -0.76
SMPD4-216ENST00000461187 SLC38A11Q08AI6 406 aa10.28□□□□□ -0.76
SMPD4-216ENST00000461187 TEPPQ6URK8 271 aa10.28□□□□□ -0.76
SMPD4-216ENST00000461187 S100A7AQ86SG5 101 aa10.28□□□□□ -0.76
SMPD4-216ENST00000461187 LRRC20Q8TCA0 184 aa10.28□□□□□ -0.76
SMPD4-216ENST00000461187 RPUSD4Q96CM3 377 aaKnown RBP10.28□□□□□ -0.76
SMPD4-216ENST00000461187 C16orf74Q96GX8 76 aa10.28□□□□□ -0.76
SMPD4-216ENST00000461187 ARV1Q9H2C2 271 aa10.28□□□□□ -0.76
SMPD4-216ENST00000461187 TIMM8BQ9Y5J9 83 aaPredicted RBP10.28□□□□□ -0.76
SMPD4-216ENST00000461187 NAP1L6A6NFF2 107 aa10.27□□□□□ -0.77
SMPD4-216ENST00000461187 HTN1P15515 57 aa10.27□□□□□ -0.77
SMPD4-216ENST00000461187 ANXA7P20073 488 aaKnown RBP10.27□□□□□ -0.77
SMPD4-216ENST00000461187 CDKN1BP46527 198 aa10.27□□□□□ -0.77
SMPD4-216ENST00000461187 BAK1Q16611 211 aa10.27□□□□□ -0.77
SMPD4-216ENST00000461187 OR10P1Q8NGE3 313 aa10.27□□□□□ -0.77
SMPD4-216ENST00000461187 RNASE8Q8TDE3 154 aaKnown RBP10.27□□□□□ -0.77
SMPD4-216ENST00000461187 RNF141Q8WVD5 230 aa10.27□□□□□ -0.77
SMPD4-216ENST00000461187 ZNF331Q9NQX6 463 aaPredicted RBP10.27□□□□□ -0.77
SMPD4-216ENST00000461187 MGAT4CQ9UBM8 478 aa10.27□□□□□ -0.77
SMPD4-216ENST00000461187 LINC00588Q9Y4M8 146 aa10.27□□□□□ -0.77
SMPD4-216ENST00000461187 CCDC160A6NGH7 325 aa10.26□□□□□ -0.77
SMPD4-216ENST00000461187 TSC22D2O75157 780 aa10.26□□□□□ -0.77
SMPD4-216ENST00000461187 SCGB1D2O95969 90 aa10.26□□□□□ -0.77
SMPD4-216ENST00000461187 CXCL2P19875 107 aa10.26□□□□□ -0.77
SMPD4-216ENST00000461187 CCL18P55774 89 aa10.26□□□□□ -0.77
SMPD4-216ENST00000461187 TAS2R30P59541 319 aa10.26□□□□□ -0.77
SMPD4-216ENST00000461187 ARL16Q0P5N6 197 aa10.26□□□□□ -0.77
SMPD4-216ENST00000461187 KIR3DS1Q14943 382 aa10.26□□□□□ -0.77
SMPD4-216ENST00000461187 SPANXN2Q5MJ10 180 aa10.26□□□□□ -0.77
SMPD4-216ENST00000461187 PXDC1Q5TGL8 231 aa10.26□□□□□ -0.77
SMPD4-216ENST00000461187 LCN15Q6UWW0 184 aa10.26□□□□□ -0.77
SMPD4-216ENST00000461187 ZNF493Q6ZR52 646 aa10.26□□□□□ -0.77
SMPD4-216ENST00000461187 LINC00305Q7Z4B0 112 aa10.26□□□□□ -0.77
SMPD4-216ENST00000461187 C6orf223Q8N319 242 aa10.26□□□□□ -0.77
SMPD4-216ENST00000461187 TMEM263Q8WUH6 116 aaKnown RBP10.26□□□□□ -0.77
SMPD4-216ENST00000461187 NOP10Q9NPE3 64 aaKnown RBP10.26□□□□□ -0.77
SMPD4-216ENST00000461187 RNF24Q9Y225 148 aa10.26□□□□□ -0.77
SMPD4-216ENST00000461187 RCL1Q9Y2P8 373 aaKnown RBP10.26□□□□□ -0.77
SMPD4-216ENST00000461187 LRP1BQ9NZR2 4599 aa10.26□□□□□ -0.77
SMPD4-216ENST00000461187 GOSR2O14653 212 aa10.25□□□□□ -0.77
SMPD4-216ENST00000461187 AGPAT2O15120 278 aa10.25□□□□□ -0.77
SMPD4-216ENST00000461187 SNRPCP09234 159 aaKnown RBP10.25□□□□□ -0.77
SMPD4-216ENST00000461187 BTCP35070 178 aa10.25□□□□□ -0.77
SMPD4-216ENST00000461187 IAH1Q2TAA2 248 aaPredicted RBP10.25□□□□□ -0.77
SMPD4-216ENST00000461187 C4orf46Q504U0 113 aa10.25□□□□□ -0.77
SMPD4-216ENST00000461187 ZNF546Q86UE3 836 aa10.25□□□□□ -0.77
SMPD4-216ENST00000461187 ZBTB8BQ8NAP8 495 aaPredicted RBP10.25□□□□□ -0.77
SMPD4-216ENST00000461187 C20orf144Q9BQM9 153 aa10.25□□□□□ -0.77
SMPD4-216ENST00000461187 SLC50A1Q9BRV3 221 aa10.25□□□□□ -0.77
SMPD4-216ENST00000461187 RBM38Q9H0Z9 239 aaKnown RBP10.25□□□□□ -0.77
SMPD4-216ENST00000461187 C16orf90A8MZG2 172 aa10.24□□□□□ -0.77
SMPD4-216ENST00000461187 H7BYZ3 331 aa10.24□□□□□ -0.77
SMPD4-216ENST00000461187 SLC17A3O00476 420 aa10.24□□□□□ -0.77
SMPD4-216ENST00000461187 INPP1P49441 399 aa10.24□□□□□ -0.77
SMPD4-216ENST00000461187 MORN5Q5VZ52 161 aa10.24□□□□□ -0.77
SMPD4-216ENST00000461187 TRIQKQ629K1 86 aa10.24□□□□□ -0.77
SMPD4-216ENST00000461187 LINC00612Q8N6U2 182 aa10.24□□□□□ -0.77
SMPD4-216ENST00000461187 TMEM37Q8WXS4 190 aa10.24□□□□□ -0.77
SMPD4-216ENST00000461187 SDHCQ99643 169 aaPredicted RBP10.24□□□□□ -0.77
SMPD4-216ENST00000461187 MGST2Q99735 147 aa10.24□□□□□ -0.77
SMPD4-216ENST00000461187 GGACTQ9BVM4 153 aa10.24□□□□□ -0.77
SMPD4-216ENST00000461187 PARD6GQ9BYG4 376 aaPredicted RBP10.24□□□□□ -0.77
SMPD4-216ENST00000461187 LINC00854A0A1B0GVQ3 168 aa10.23□□□□□ -0.77
SMPD4-216ENST00000461187 C7orf66A4D0T2 115 aa10.23□□□□□ -0.77
SMPD4-216ENST00000461187 PRAC2D3DTV9 90 aa10.23□□□□□ -0.77
SMPD4-216ENST00000461187 MBPP02686 304 aaPredicted RBP10.23□□□□□ -0.77
SMPD4-216ENST00000461187 CLINT1Q14677 625 aa10.23□□□□□ -0.77
SMPD4-216ENST00000461187 SSX7Q7RTT5 188 aa10.23□□□□□ -0.77
SMPD4-216ENST00000461187 BPIFA4PQ86YQ2 179 aa10.23□□□□□ -0.77
SMPD4-216ENST00000461187 MITD1Q8WV92 249 aa10.23□□□□□ -0.77
SMPD4-216ENST00000461187 GSKIPQ9P0R6 139 aa10.23□□□□□ -0.77
SMPD4-216ENST00000461187 H3BTX0 84 aa10.22□□□□□ -0.77
SMPD4-216ENST00000461187 COX7A2P2O60397 106 aa10.22□□□□□ -0.77
SMPD4-216ENST00000461187 CDK2AP2O75956 126 aa10.22□□□□□ -0.77
SMPD4-216ENST00000461187 IGLC2P0DOY2 106 aa10.22□□□□□ -0.77
SMPD4-216ENST00000461187 OPCMLQ14982 345 aa10.22□□□□□ -0.77
SMPD4-216ENST00000461187 GFI1BQ5VTD9 330 aa10.22□□□□□ -0.77
SMPD4-216ENST00000461187 OR10J6PQ8NGY7 276 aa10.22□□□□□ -0.77
SMPD4-216ENST00000461187 SAT2Q96F10 170 aaPredicted RBP10.22□□□□□ -0.77
SMPD4-216ENST00000461187 TRAV26-1A0A087WT03 109 aa10.21□□□□□ -0.77
SMPD4-216ENST00000461187 H3BQ15 152 aa10.21□□□□□ -0.77
SMPD4-216ENST00000461187 OR5I1Q13606 314 aa10.21□□□□□ -0.77
SMPD4-216ENST00000461187 C10orf113Q5VZT2 155 aa10.21□□□□□ -0.77
SMPD4-216ENST00000461187 GNPNAT1Q96EK6 184 aaPredicted RBP10.21□□□□□ -0.77
SMPD4-216ENST00000461187 Q9H8V8 135 aa10.21□□□□□ -0.77
SMPD4-216ENST00000461187 PXMP4Q9Y6I8 212 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms