RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 VWC2Q2TAL6 325 aa12.31□□□□□ -0.44
TOP3A-202ENST00000461127 ACTL10Q5JWF8 245 aa12.31□□□□□ -0.44
TOP3A-202ENST00000461127 RPL7L1Q6DKI1 246 aaKnown RBP12.31□□□□□ -0.44
TOP3A-202ENST00000461127 STXBP6Q8NFX7 210 aa12.31□□□□□ -0.44
TOP3A-202ENST00000461127 C1QTNF4Q9BXJ3 329 aa12.31□□□□□ -0.44
TOP3A-202ENST00000461127 LRP1BQ9NZR2 4599 aa12.3□□□□□ -0.44
TOP3A-202ENST00000461127 A0A1W2PS18 150 aa12.3□□□□□ -0.44
TOP3A-202ENST00000461127 APOHP02749 345 aaPredicted RBP12.3□□□□□ -0.44
TOP3A-202ENST00000461127 SPART-AS1P0CW21 52 aa12.3□□□□□ -0.44
TOP3A-202ENST00000461127 NUTF2P61970 127 aaKnown RBP12.3□□□□□ -0.44
TOP3A-202ENST00000461127 RAB31Q13636 194 aa12.3□□□□□ -0.44
TOP3A-202ENST00000461127 TOMM20LQ6UXN7 152 aa12.3□□□□□ -0.44
TOP3A-202ENST00000461127 SLC51BQ86UW2 128 aa12.3□□□□□ -0.44
TOP3A-202ENST00000461127 OR4X1Q8NH49 305 aa12.3□□□□□ -0.44
TOP3A-202ENST00000461127 NPIPB3Q92617 1050 aa12.3□□□□□ -0.44
TOP3A-202ENST00000461127 CYTL1Q9NRR1 136 aa12.3□□□□□ -0.44
TOP3A-202ENST00000461127 ZFP92A6NM28 416 aa12.29□□□□□ -0.44
TOP3A-202ENST00000461127 K7EQG2 157 aa12.29□□□□□ -0.44
TOP3A-202ENST00000461127 ZNF688P0C7X2 276 aa12.29□□□□□ -0.44
TOP3A-202ENST00000461127 TPT1P13693 172 aaKnown RBP12.29□□□□□ -0.44
TOP3A-202ENST00000461127 TEPPQ6URK8 271 aa12.29□□□□□ -0.44
TOP3A-202ENST00000461127 TMEM144Q7Z5S9 345 aa12.29□□□□□ -0.44
TOP3A-202ENST00000461127 ZNF709Q8N972 641 aa12.29□□□□□ -0.44
TOP3A-202ENST00000461127 WDR61Q9GZS3 305 aaKnown RBP12.29□□□□□ -0.44
TOP3A-202ENST00000461127 MRPL36Q9P0J6 103 aaKnown RBP12.29□□□□□ -0.44
TOP3A-202ENST00000461127 WDR83OSQ9Y284 106 aa12.29□□□□□ -0.44
TOP3A-202ENST00000461127 NACAE9PAV3 2078 aa12.28□□□□□ -0.44
TOP3A-202ENST00000461127 TMEM189A5PLL7 270 aa12.28□□□□□ -0.44
TOP3A-202ENST00000461127 MPDU1O75352 247 aa12.28□□□□□ -0.44
TOP3A-202ENST00000461127 CLN5O75503 358 aa12.28□□□□□ -0.44
TOP3A-202ENST00000461127 HSD17B11Q8NBQ5 300 aa12.28□□□□□ -0.44
TOP3A-202ENST00000461127 PARD6GQ9BYG4 376 aaPredicted RBP12.28□□□□□ -0.44
TOP3A-202ENST00000461127 TRAV30A0A087WSZ9 112 aa12.27□□□□□ -0.45
TOP3A-202ENST00000461127 TEX48A0A1B0GUV7 120 aa12.27□□□□□ -0.45
TOP3A-202ENST00000461127 C17orf112F2Z3M2 114 aa12.27□□□□□ -0.45
TOP3A-202ENST00000461127 FABP1P07148 127 aa12.27□□□□□ -0.45
TOP3A-202ENST00000461127 NPPCP23582 126 aa12.27□□□□□ -0.45
TOP3A-202ENST00000461127 OR10J1P30954 320 aa12.27□□□□□ -0.45
TOP3A-202ENST00000461127 CAMLGP49069 296 aa12.27□□□□□ -0.45
TOP3A-202ENST00000461127 FAM3BP58499 235 aaPredicted RBP12.27□□□□□ -0.45
TOP3A-202ENST00000461127 ZNF600Q6ZNG1 722 aa12.27□□□□□ -0.45
TOP3A-202ENST00000461127 THAP8Q8NA92 274 aa12.27□□□□□ -0.45
TOP3A-202ENST00000461127 PUS1Q9Y606 427 aaKnown RBP eCLIP12.27□□□□□ -0.45
TOP3A-202ENST00000461127 EMP1P54849 157 aa12.26□□□□□ -0.45
TOP3A-202ENST00000461127 BAP18Q8IXM2 172 aa12.26□□□□□ -0.45
TOP3A-202ENST00000461127 STOML3Q8TAV4 291 aa12.26□□□□□ -0.45
TOP3A-202ENST00000461127 GNPNAT1Q96EK6 184 aaPredicted RBP12.26□□□□□ -0.45
TOP3A-202ENST00000461127 NARS2Q96I59 477 aaKnown RBP12.26□□□□□ -0.45
TOP3A-202ENST00000461127 NPCDR1Q9BY65 106 aa12.26□□□□□ -0.45
TOP3A-202ENST00000461127 KCNIP2Q9NS61 270 aa12.26□□□□□ -0.45
TOP3A-202ENST00000461127 XCL2Q9UBD3 114 aa12.26□□□□□ -0.45
TOP3A-202ENST00000461127 AGPAT2O15120 278 aa12.25□□□□□ -0.45
TOP3A-202ENST00000461127 IGLC1P0CG04 106 aa12.25□□□□□ -0.45
TOP3A-202ENST00000461127 ATP6V0CP27449 155 aa12.25□□□□□ -0.45
TOP3A-202ENST00000461127 TIGITQ495A1 244 aa12.25□□□□□ -0.45
TOP3A-202ENST00000461127 EIF5AL1Q6IS14 154 aaKnown RBP12.25□□□□□ -0.45
TOP3A-202ENST00000461127 C6orf223Q8N319 242 aa12.25□□□□□ -0.45
TOP3A-202ENST00000461127 METTL26Q96S19 204 aa12.25□□□□□ -0.45
TOP3A-202ENST00000461127 TRGV9Q99603 122 aa12.25□□□□□ -0.45
TOP3A-202ENST00000461127 MGST2Q99735 147 aa12.25□□□□□ -0.45
TOP3A-202ENST00000461127 ZFAND3Q9H8U3 227 aa12.25□□□□□ -0.45
TOP3A-202ENST00000461127 IGKV1OR2-108A0A075B7D4 117 aa12.24□□□□□ -0.45
TOP3A-202ENST00000461127 HTN3P15516 51 aa12.24□□□□□ -0.45
TOP3A-202ENST00000461127 CYP2G1PQ6ZSU1 146 aa12.24□□□□□ -0.45
TOP3A-202ENST00000461127 DCANP1Q8TF63 244 aa12.24□□□□□ -0.45
TOP3A-202ENST00000461127 NEU1Q99519 415 aa12.24□□□□□ -0.45
TOP3A-202ENST00000461127 NIPSNAP3BQ9BS92 247 aa12.24□□□□□ -0.45
TOP3A-202ENST00000461127 ATG101Q9BSB4 218 aa12.24□□□□□ -0.45
TOP3A-202ENST00000461127 RSG1Q9BU20 258 aa12.24□□□□□ -0.45
TOP3A-202ENST00000461127 ARV1Q9H2C2 271 aa12.24□□□□□ -0.45
TOP3A-202ENST00000461127 TIMM9Q9Y5J7 89 aa12.24□□□□□ -0.45
TOP3A-202ENST00000461127 IGKV1D-37A0A075B6S9 117 aa12.23□□□□□ -0.45
TOP3A-202ENST00000461127 SMIM9A6NGZ8 99 aa12.23□□□□□ -0.45
TOP3A-202ENST00000461127 SELENOTP62341 195 aa12.23□□□□□ -0.45
TOP3A-202ENST00000461127 PSMG4Q5JS54 123 aa12.23□□□□□ -0.45
TOP3A-202ENST00000461127 OR2G3Q8NGZ4 309 aa12.23□□□□□ -0.45
TOP3A-202ENST00000461127 PSMG3Q9BT73 122 aaPredicted RBP12.23□□□□□ -0.45
TOP3A-202ENST00000461127 SH3BGRL3Q9H299 93 aa12.23□□□□□ -0.45
TOP3A-202ENST00000461127 SLC25A32Q9H2D1 315 aa12.23□□□□□ -0.45
TOP3A-202ENST00000461127 APOBP04114 4563 aaKnown RBP12.22□□□□□ -0.45
TOP3A-202ENST00000461127 HELTA6NFD8 242 aa12.22□□□□□ -0.45
TOP3A-202ENST00000461127 RD3LP0DJH9 198 aa12.22□□□□□ -0.45
TOP3A-202ENST00000461127 YPEL3P61236 119 aaPredicted RBP12.22□□□□□ -0.45
TOP3A-202ENST00000461127 ZNF90Q03938 601 aa12.22□□□□□ -0.45
TOP3A-202ENST00000461127 MIC13Q5XKP0 118 aa12.22□□□□□ -0.45
TOP3A-202ENST00000461127 BPIFCQ8NFQ6 507 aa12.22□□□□□ -0.45
TOP3A-202ENST00000461127 Q8WTZ3 238 aa12.22□□□□□ -0.45
TOP3A-202ENST00000461127 SLC45A2Q9UMX9 530 aa12.22□□□□□ -0.45
TOP3A-202ENST00000461127 PXMP4Q9Y6I8 212 aa12.22□□□□□ -0.45
TOP3A-202ENST00000461127 NBDYA0A0U1RRE5 68 aa12.21□□□□□ -0.45
TOP3A-202ENST00000461127 EPM2AB3EWF7 344 aa12.21□□□□□ -0.45
TOP3A-202ENST00000461127 TOMM40O96008 361 aa12.21□□□□□ -0.45
TOP3A-202ENST00000461127 IGKV1-17P01599 117 aa12.21□□□□□ -0.45
TOP3A-202ENST00000461127 SEC11BP0C7V7 166 aa12.21□□□□□ -0.45
TOP3A-202ENST00000461127 RPL29P47914 159 aaKnown RBP12.21□□□□□ -0.45
TOP3A-202ENST00000461127 FFAR4Q5NUL3 377 aa12.21□□□□□ -0.45
TOP3A-202ENST00000461127 SPATA12Q7Z6I5 190 aa12.21□□□□□ -0.45
TOP3A-202ENST00000461127 C15orf53Q8NAA6 179 aa12.21□□□□□ -0.45
TOP3A-202ENST00000461127 TMED6Q8WW62 240 aa12.21□□□□□ -0.45
TOP3A-202ENST00000461127 PHYHIPLQ96FC7 376 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms