RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 LAMTOR2Q9Y2Q5 125 aa8.59□□□□□ -1.03
APTX-209ENST00000460940 PAM16Q9Y3D7 125 aa8.59□□□□□ -1.03
APTX-209ENST00000460940 TRBV9A0A0B4J1U6 114 aa8.58□□□□□ -1.04
APTX-209ENST00000460940 CCL24O00175 119 aa8.58□□□□□ -1.04
APTX-209ENST00000460940 IFNA5P01569 189 aa8.58□□□□□ -1.04
APTX-209ENST00000460940 PRCDQ00LT1 54 aa8.58□□□□□ -1.04
APTX-209ENST00000460940 FHL3Q13643 280 aa8.58□□□□□ -1.04
APTX-209ENST00000460940 TMEM41BQ5BJD5 291 aa8.58□□□□□ -1.04
APTX-209ENST00000460940 RAX2Q96IS3 184 aa8.58□□□□□ -1.04
APTX-209ENST00000460940 MANBALQ9NQG1 85 aa8.58□□□□□ -1.04
APTX-209ENST00000460940 TRAPPC1Q9Y5R8 145 aa8.58□□□□□ -1.04
APTX-209ENST00000460940 HSPE1P61604 102 aaKnown RBP8.57□□□□□ -1.04
APTX-209ENST00000460940 RHOGP84095 191 aa8.57□□□□□ -1.04
APTX-209ENST00000460940 LINC00482Q8N8I6 264 aa8.57□□□□□ -1.04
APTX-209ENST00000460940 RNF2Q99496 336 aa8.57□□□□□ -1.04
APTX-209ENST00000460940 HINT2Q9BX68 163 aa8.57□□□□□ -1.04
APTX-209ENST00000460940 RPRMQ9NS64 109 aa8.57□□□□□ -1.04
APTX-209ENST00000460940 A0A0G2JRQ6 117 aa8.57□□□□□ -1.04
APTX-209ENST00000460940 SSSCA1O60232 199 aa8.57□□□□□ -1.04
APTX-209ENST00000460940 DEFA4P12838 97 aa8.57□□□□□ -1.04
APTX-209ENST00000460940 YPEL3P61236 119 aaPredicted RBP8.57□□□□□ -1.04
APTX-209ENST00000460940 RPL19P84098 196 aaKnown RBP8.57□□□□□ -1.04
APTX-209ENST00000460940 SERF2P84101 59 aa8.57□□□□□ -1.04
APTX-209ENST00000460940 MEF2BQ02080 365 aaPredicted RBP8.57□□□□□ -1.04
APTX-209ENST00000460940 WT1-ASQ06250 92 aa8.57□□□□□ -1.04
APTX-209ENST00000460940 ZNF726P1Q15940 193 aa8.57□□□□□ -1.04
APTX-209ENST00000460940 RNF151Q2KHN1 245 aa8.57□□□□□ -1.04
APTX-209ENST00000460940 DEFB136Q30KP8 78 aa8.57□□□□□ -1.04
APTX-209ENST00000460940 TDRG1Q3Y452 100 aa8.57□□□□□ -1.04
APTX-209ENST00000460940 WFDC9Q8NEX5 89 aa8.57□□□□□ -1.04
APTX-209ENST00000460940 OR4C5Q8NGB2 326 aa8.57□□□□□ -1.04
APTX-209ENST00000460940 OR10W1Q8NGF6 305 aa8.57□□□□□ -1.04
APTX-209ENST00000460940 PINX1Q96BK5 328 aaKnown RBP8.57□□□□□ -1.04
APTX-209ENST00000460940 PLEKHA3Q9HB20 300 aa8.57□□□□□ -1.04
APTX-209ENST00000460940 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.57□□□□□ -1.04
APTX-209ENST00000460940 MRPS16Q9Y3D3 137 aaKnown RBP8.57□□□□□ -1.04
APTX-209ENST00000460940 CMYA5Q8N3K9 4069 aa8.56□□□□□ -1.04
APTX-209ENST00000460940 NOTCH1P46531 2555 aa8.56□□□□□ -1.04
APTX-209ENST00000460940 IGLV11-55A0A075B6I3 123 aa8.56□□□□□ -1.04
APTX-209ENST00000460940 INS-IGF2F8WCM5 200 aa8.56□□□□□ -1.04
APTX-209ENST00000460940 NUPR1O60356 82 aa8.56□□□□□ -1.04
APTX-209ENST00000460940 IGHV3-11P01762 117 aa8.56□□□□□ -1.04
APTX-209ENST00000460940 NBEAP1P0C6P0 100 aa8.56□□□□□ -1.04
APTX-209ENST00000460940 CD33P20138 364 aa8.56□□□□□ -1.04
APTX-209ENST00000460940 HNRNPA3P51991 378 aaKnown RBP8.56□□□□□ -1.04
APTX-209ENST00000460940 ID3Q02535 119 aa8.56□□□□□ -1.04
APTX-209ENST00000460940 ATP5G2Q06055 141 aa8.56□□□□□ -1.04
APTX-209ENST00000460940 IZUMO4Q1ZYL8 232 aa8.56□□□□□ -1.04
APTX-209ENST00000460940 NMSQ5H8A3 153 aa8.56□□□□□ -1.04
APTX-209ENST00000460940 OR11H1Q8NG94 326 aa8.56□□□□□ -1.04
APTX-209ENST00000460940 OR1N2Q8NGR9 330 aa8.56□□□□□ -1.04
APTX-209ENST00000460940 OR52E5Q8NH55 327 aa8.56□□□□□ -1.04
APTX-209ENST00000460940 SMIM12Q96EX1 92 aa8.56□□□□□ -1.04
APTX-209ENST00000460940 VPS25Q9BRG1 176 aa8.56□□□□□ -1.04
APTX-209ENST00000460940 THYN1Q9P016 225 aa8.56□□□□□ -1.04
APTX-209ENST00000460940 CACNG5Q9UF02 275 aa8.56□□□□□ -1.04
APTX-209ENST00000460940 TRAV9-1A0A075B6T8 112 aa8.55□□□□□ -1.04
APTX-209ENST00000460940 REG1AP05451 166 aa8.55□□□□□ -1.04
APTX-209ENST00000460940 IGLC2P0DOY2 106 aa8.55□□□□□ -1.04
APTX-209ENST00000460940 IGLC3P0DOY3 106 aa8.55□□□□□ -1.04
APTX-209ENST00000460940 C15orf32Q32M92 178 aa8.55□□□□□ -1.04
APTX-209ENST00000460940 PDLIM3Q53GG5 364 aaPredicted RBP8.55□□□□□ -1.04
APTX-209ENST00000460940 CST9LP1Q5W188 147 aa8.55□□□□□ -1.04
APTX-209ENST00000460940 ZNF114Q8NC26 417 aa8.55□□□□□ -1.04
APTX-209ENST00000460940 DPF1Q92782 380 aa8.55□□□□□ -1.04
APTX-209ENST00000460940 GPR146Q96CH1 333 aa8.55□□□□□ -1.04
APTX-209ENST00000460940 FANCD2OSQ96PS1 177 aa8.55□□□□□ -1.04
APTX-209ENST00000460940 MRPL27Q9P0M9 148 aaKnown RBP8.55□□□□□ -1.04
APTX-209ENST00000460940 FBXL7Q9UJT9 491 aa8.55□□□□□ -1.04
APTX-209ENST00000460940 NOTCH3Q9UM47 2321 aa8.55□□□□□ -1.04
APTX-209ENST00000460940 F11RQ9Y624 299 aaKnown RBP8.55□□□□□ -1.04
APTX-209ENST00000460940 CBY3A6NI87 242 aa8.55□□□□□ -1.04
APTX-209ENST00000460940 LINC01619G3V211 115 aa8.55□□□□□ -1.04
APTX-209ENST00000460940 OR2J3O76001 311 aa8.55□□□□□ -1.04
APTX-209ENST00000460940 CST7O76096 145 aa8.55□□□□□ -1.04
APTX-209ENST00000460940 SUMO1P63165 101 aaKnown RBP8.55□□□□□ -1.04
APTX-209ENST00000460940 LCN15Q6UWW0 184 aa8.55□□□□□ -1.04
APTX-209ENST00000460940 Q6ZRM9 215 aa8.55□□□□□ -1.04
APTX-209ENST00000460940 SCGB1C1Q8TD33 95 aa8.55□□□□□ -1.04
APTX-209ENST00000460940 VN1R17PQ8TDU5 208 aa8.55□□□□□ -1.04
APTX-209ENST00000460940 DUX3Q96PT4 197 aa8.55□□□□□ -1.04
APTX-209ENST00000460940 MCRIP2Q9BUT9 160 aaKnown RBP8.55□□□□□ -1.04
APTX-209ENST00000460940 PARLQ9H300 379 aa8.55□□□□□ -1.04
APTX-209ENST00000460940 CLEC5AQ9NY25 188 aa8.55□□□□□ -1.04
APTX-209ENST00000460940 SLC25A6P12236 298 aa8.54□□□□□ -1.04
APTX-209ENST00000460940 PSMB3P49720 205 aa8.54□□□□□ -1.04
APTX-209ENST00000460940 FGF8P55075 233 aaPredicted RBP8.54□□□□□ -1.04
APTX-209ENST00000460940 ERHP84090 104 aaKnown RBP8.54□□□□□ -1.04
APTX-209ENST00000460940 Q0VG73 95 aa8.54□□□□□ -1.04
APTX-209ENST00000460940 SPATA45Q537H7 98 aa8.54□□□□□ -1.04
APTX-209ENST00000460940 OCIAD2Q56VL3 154 aa8.54□□□□□ -1.04
APTX-209ENST00000460940 C19orf35Q6ZS72 473 aa8.54□□□□□ -1.04
APTX-209ENST00000460940 Q8N976 141 aa8.54□□□□□ -1.04
APTX-209ENST00000460940 RPUSD4Q96CM3 377 aaKnown RBP8.54□□□□□ -1.04
APTX-209ENST00000460940 ENY2Q9NPA8 101 aa8.54□□□□□ -1.04
APTX-209ENST00000460940 PEF1Q9UBV8 284 aaKnown RBP8.54□□□□□ -1.04
APTX-209ENST00000460940 TP53TG3Q9ULZ0 132 aa8.54□□□□□ -1.04
APTX-209ENST00000460940 IGHV4OR15-8A0A075B7B6 117 aa8.53□□□□□ -1.04
APTX-209ENST00000460940 A0A087WW49 117 aa8.53□□□□□ -1.04
APTX-209ENST00000460940 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms