RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 C17orf77Q96MU5 243 aa15.94■□□□□ 0.14
SSNA1-202ENST00000459860 SLC50A1Q9BRV3 221 aa15.94■□□□□ 0.14
SSNA1-202ENST00000459860 C1QTNF4Q9BXJ3 329 aa15.94■□□□□ 0.14
SSNA1-202ENST00000459860 OR4B1Q8NGF8 309 aa15.93■□□□□ 0.14
SSNA1-202ENST00000459860 C20orf173Q96LM9 149 aa15.93■□□□□ 0.14
SSNA1-202ENST00000459860 BIRC6Q9NR09 4857 aa15.93■□□□□ 0.14
SSNA1-202ENST00000459860 TRAV5A0A0B4J249 113 aa15.92■□□□□ 0.14
SSNA1-202ENST00000459860 IGKV3-20P01619 116 aa15.92■□□□□ 0.14
SSNA1-202ENST00000459860 DEFB1P60022 68 aa15.92■□□□□ 0.14
SSNA1-202ENST00000459860 GUK1Q16774 197 aa15.92■□□□□ 0.14
SSNA1-202ENST00000459860 Q5BKY6 102 aa15.92■□□□□ 0.14
SSNA1-202ENST00000459860 GCSAMLQ5JQS6 135 aa15.92■□□□□ 0.14
SSNA1-202ENST00000459860 FFAR4Q5NUL3 377 aa15.92■□□□□ 0.14
SSNA1-202ENST00000459860 GDF5OSQ5U4N7 250 aa15.92■□□□□ 0.14
SSNA1-202ENST00000459860 RNF182Q8N6D2 247 aa15.92■□□□□ 0.14
SSNA1-202ENST00000459860 MRPL32Q9BYC8 188 aaKnown RBP15.92■□□□□ 0.14
SSNA1-202ENST00000459860 HRH4Q9H3N8 390 aa15.92■□□□□ 0.14
SSNA1-202ENST00000459860 TRAV8-2A0A0B4J237 113 aa15.91■□□□□ 0.14
SSNA1-202ENST00000459860 A0A0J9YX75 114 aa15.91■□□□□ 0.14
SSNA1-202ENST00000459860 C4BPBP20851 252 aa15.91■□□□□ 0.14
SSNA1-202ENST00000459860 IGFL4Q6B9Z1 124 aa15.91■□□□□ 0.14
SSNA1-202ENST00000459860 RARRES2Q99969 163 aa15.91■□□□□ 0.14
SSNA1-202ENST00000459860 WFDC1Q9HC57 220 aa15.91■□□□□ 0.14
SSNA1-202ENST00000459860 F6UB75 175 aa15.9■□□□□ 0.14
SSNA1-202ENST00000459860 DUSP14O95147 198 aaKnown RBP15.9■□□□□ 0.14
SSNA1-202ENST00000459860 SNRPCP09234 159 aaKnown RBP15.9■□□□□ 0.14
SSNA1-202ENST00000459860 IGLC2P0DOY2 106 aa15.9■□□□□ 0.14
SSNA1-202ENST00000459860 PSG3Q16557 428 aa15.9■□□□□ 0.14
SSNA1-202ENST00000459860 CLUHP3Q96NS8 147 aa15.9■□□□□ 0.14
SSNA1-202ENST00000459860 ZNF331Q9NQX6 463 aaPredicted RBP15.9■□□□□ 0.14
SSNA1-202ENST00000459860 CLEC5AQ9NY25 188 aa15.9■□□□□ 0.14
SSNA1-202ENST00000459860 TMEM14CQ9P0S9 112 aa15.9■□□□□ 0.14
SSNA1-202ENST00000459860 TNFSF18Q9UNG2 199 aa15.9■□□□□ 0.14
SSNA1-202ENST00000459860 CSMD3Q7Z407 3707 aa15.9■□□□□ 0.14
SSNA1-202ENST00000459860 OR11H2Q8NH07 326 aa15.89■□□□□ 0.13
SSNA1-202ENST00000459860 FUT9Q9Y231 359 aa15.89■□□□□ 0.13
SSNA1-202ENST00000459860 TIMM9Q9Y5J7 89 aa15.89■□□□□ 0.13
SSNA1-202ENST00000459860 H3BTX0 84 aa15.88■□□□□ 0.13
SSNA1-202ENST00000459860 MIR17HGQ75NE6 70 aa15.88■□□□□ 0.13
SSNA1-202ENST00000459860 IL17DQ8TAD2 202 aa15.88■□□□□ 0.13
SSNA1-202ENST00000459860 H3BQ15 152 aa15.87■□□□□ 0.13
SSNA1-202ENST00000459860 HIST1H1EP10412 219 aaKnown RBP15.87■□□□□ 0.13
SSNA1-202ENST00000459860 HLA-DMBP28068 263 aa15.87■□□□□ 0.13
SSNA1-202ENST00000459860 RHOBP62745 196 aa15.87■□□□□ 0.13
SSNA1-202ENST00000459860 PSG9Q00887 426 aa15.87■□□□□ 0.13
SSNA1-202ENST00000459860 ACOT6Q3I5F7 207 aaPredicted RBP15.87■□□□□ 0.13
SSNA1-202ENST00000459860 HSD17B11Q8NBQ5 300 aa15.87■□□□□ 0.13
SSNA1-202ENST00000459860 SLC25A2Q9BXI2 301 aa15.87■□□□□ 0.13
SSNA1-202ENST00000459860 XCL2Q9UBD3 114 aa15.87■□□□□ 0.13
SSNA1-202ENST00000459860 BORCS7-ASMTA0A0B4J1R7 106 aa15.86■□□□□ 0.13
SSNA1-202ENST00000459860 A0A0J9YWU9 116 aa15.86■□□□□ 0.13
SSNA1-202ENST00000459860 RNF222A6NCQ9 220 aa15.86■□□□□ 0.13
SSNA1-202ENST00000459860 SLC17A3O00476 420 aa15.86■□□□□ 0.13
SSNA1-202ENST00000459860 ZNF253O75346 499 aa15.86■□□□□ 0.13
SSNA1-202ENST00000459860 GIG44P09565 113 aaPredicted RBP15.86■□□□□ 0.13
SSNA1-202ENST00000459860 PYYP10082 97 aa15.86■□□□□ 0.13
SSNA1-202ENST00000459860 RPUSD4Q96CM3 377 aaKnown RBP15.86■□□□□ 0.13
SSNA1-202ENST00000459860 MFFQ9GZY8 342 aa15.86■□□□□ 0.13
SSNA1-202ENST00000459860 ZNF586Q9NXT0 402 aa15.86■□□□□ 0.13
SSNA1-202ENST00000459860 LCE6AA0A183 80 aa15.85■□□□□ 0.13
SSNA1-202ENST00000459860 ARPC5O15511 151 aa15.85■□□□□ 0.13
SSNA1-202ENST00000459860 OR7C2O60412 319 aa15.85■□□□□ 0.13
SSNA1-202ENST00000459860 CNN1P51911 297 aaKnown RBP15.85■□□□□ 0.13
SSNA1-202ENST00000459860 TAS2R45P59539 299 aa15.85■□□□□ 0.13
SSNA1-202ENST00000459860 HIST1H1AQ02539 215 aaPredicted RBP15.85■□□□□ 0.13
SSNA1-202ENST00000459860 PDE6HQ13956 83 aa15.85■□□□□ 0.13
SSNA1-202ENST00000459860 OR8A1Q8NGG7 326 aa15.85■□□□□ 0.13
SSNA1-202ENST00000459860 OR51M1Q9H341 326 aa15.85■□□□□ 0.13
SSNA1-202ENST00000459860 TRBV19A0A075B6N1 114 aa15.84■□□□□ 0.13
SSNA1-202ENST00000459860 M6PRP20645 277 aa15.84■□□□□ 0.13
SSNA1-202ENST00000459860 FXYD7P58549 80 aa15.84■□□□□ 0.13
SSNA1-202ENST00000459860 KHDC3LQ587J8 217 aa15.84■□□□□ 0.13
SSNA1-202ENST00000459860 BLNKQ8WV28 456 aa15.84■□□□□ 0.13
SSNA1-202ENST00000459860 SAT2Q96F10 170 aaPredicted RBP15.84■□□□□ 0.13
SSNA1-202ENST00000459860 PSMG3Q9BT73 122 aaPredicted RBP15.84■□□□□ 0.13
SSNA1-202ENST00000459860 PAXXQ9BUH6 204 aa15.84■□□□□ 0.13
SSNA1-202ENST00000459860 SLC35B3Q9H1N7 401 aa15.84■□□□□ 0.13
SSNA1-202ENST00000459860 PPP1R14DQ9NXH3 145 aa15.84■□□□□ 0.13
SSNA1-202ENST00000459860 A0A1W2PPV4 95 aa15.83■□□□□ 0.12
SSNA1-202ENST00000459860 A8MTW9 85 aa15.83■□□□□ 0.12
SSNA1-202ENST00000459860 G3V3Q6 166 aa15.83■□□□□ 0.12
SSNA1-202ENST00000459860 AMBPP02760 352 aa15.83■□□□□ 0.12
SSNA1-202ENST00000459860 OR10J6PQ8NGY7 276 aa15.83■□□□□ 0.12
SSNA1-202ENST00000459860 FAM167A-AS1Q96KT0 104 aa15.83■□□□□ 0.12
SSNA1-202ENST00000459860 AAMDCQ9H7C9 122 aa15.83■□□□□ 0.12
SSNA1-202ENST00000459860 SMLR1H3BR10 107 aa15.82■□□□□ 0.12
SSNA1-202ENST00000459860 ZNF705DP0CH99 300 aaPredicted RBP15.82■□□□□ 0.12
SSNA1-202ENST00000459860 ZNF705BP0CI00 300 aaPredicted RBP15.82■□□□□ 0.12
SSNA1-202ENST00000459860 ATP6V0CP27449 155 aa15.82■□□□□ 0.12
SSNA1-202ENST00000459860 CSNK1G2-AS1Q8NCQ2 148 aa15.82■□□□□ 0.12
SSNA1-202ENST00000459860 OR2G3Q8NGZ4 309 aa15.82■□□□□ 0.12
SSNA1-202ENST00000459860 C11orf68Q9H3H3 251 aaKnown RBP15.82■□□□□ 0.12
SSNA1-202ENST00000459860 PRELID1Q9Y255 219 aa15.82■□□□□ 0.12
SSNA1-202ENST00000459860 ZNF705EA8MWA4 302 aaPredicted RBP15.81■□□□□ 0.12
SSNA1-202ENST00000459860 TAAR5O14804 337 aa15.81■□□□□ 0.12
SSNA1-202ENST00000459860 MBP02144 154 aa15.81■□□□□ 0.12
SSNA1-202ENST00000459860 NBEAP1P0C6P0 100 aa15.81■□□□□ 0.12
SSNA1-202ENST00000459860 MIFP14174 115 aa15.81■□□□□ 0.12
SSNA1-202ENST00000459860 UBE2L3P68036 154 aaKnown RBP15.81■□□□□ 0.12
SSNA1-202ENST00000459860 RPL7L1Q6DKI1 246 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms