RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	ZNF705D	P0CH99	300 aa	Predicted RBP	7.49	□□□□□ -1.21
MRPL55-223	ENST00000459783	ZNF705B	P0CI00	300 aa	Predicted RBP	7.49	□□□□□ -1.21
MRPL55-223	ENST00000459783	ATP6V0C	P27449	155 aa		7.49	□□□□□ -1.21
MRPL55-223	ENST00000459783	ID1	P41134	155 aa		7.49	□□□□□ -1.21
MRPL55-223	ENST00000459783	APOC4	P55056	127 aa		7.49	□□□□□ -1.21
MRPL55-223	ENST00000459783	RAB2A	P61019	212 aa		7.49	□□□□□ -1.21
MRPL55-223	ENST00000459783	AMTN	Q6UX39	209 aa		7.49	□□□□□ -1.21
MRPL55-223	ENST00000459783	FOXI2	Q6ZQN5	318 aa		7.49	□□□□□ -1.21
MRPL55-223	ENST00000459783		Q6ZWC4	215 aa		7.49	□□□□□ -1.21
MRPL55-223	ENST00000459783	BPIFA4P	Q86YQ2	179 aa		7.49	□□□□□ -1.21
MRPL55-223	ENST00000459783	STH	Q8IWL8	128 aa		7.49	□□□□□ -1.21
MRPL55-223	ENST00000459783	ZNF709	Q8N972	641 aa		7.49	□□□□□ -1.21
MRPL55-223	ENST00000459783	HSD17B11	Q8NBQ5	300 aa		7.49	□□□□□ -1.21
MRPL55-223	ENST00000459783	SCGB1C1	Q8TD33	95 aa		7.49	□□□□□ -1.21
MRPL55-223	ENST00000459783	RNF183	Q96D59	192 aa		7.49	□□□□□ -1.21
MRPL55-223	ENST00000459783	HRH4	Q9H3N8	390 aa		7.49	□□□□□ -1.21
MRPL55-223	ENST00000459783	ZMAT4	Q9H898	229 aa		7.49	□□□□□ -1.21
MRPL55-223	ENST00000459783	ZNF331	Q9NQX6	463 aa	Predicted RBP	7.49	□□□□□ -1.21
MRPL55-223	ENST00000459783	TMEM14C	Q9P0S9	112 aa		7.49	□□□□□ -1.21
MRPL55-223	ENST00000459783	FUT9	Q9Y231	359 aa		7.49	□□□□□ -1.21
MRPL55-223	ENST00000459783	hCG_2014768	A0A024R1R8	64 aa		7.48	□□□□□ -1.21
MRPL55-223	ENST00000459783	ZNF705F	A8MVS1	300 aa	Predicted RBP	7.48	□□□□□ -1.21
MRPL55-223	ENST00000459783	PRAC2	D3DTV9	90 aa		7.48	□□□□□ -1.21
MRPL55-223	ENST00000459783	C17orf112	F2Z3M2	114 aa		7.48	□□□□□ -1.21
MRPL55-223	ENST00000459783	UBE2C	O00762	179 aa		7.48	□□□□□ -1.21
MRPL55-223	ENST00000459783	CA1	P00915	261 aa	Predicted RBP	7.48	□□□□□ -1.21
MRPL55-223	ENST00000459783	IGKV3-20	P01619	116 aa		7.48	□□□□□ -1.21
MRPL55-223	ENST00000459783	CXCL2	P19875	107 aa		7.48	□□□□□ -1.21
MRPL55-223	ENST00000459783	S100A7	P31151	101 aa		7.48	□□□□□ -1.21
MRPL55-223	ENST00000459783	CD300C	Q08708	224 aa		7.48	□□□□□ -1.21
MRPL55-223	ENST00000459783	INO80E	Q8NBZ0	244 aa	Predicted RBP	7.48	□□□□□ -1.21
MRPL55-223	ENST00000459783	CSNK1G2-AS1	Q8NCQ2	148 aa		7.48	□□□□□ -1.21
MRPL55-223	ENST00000459783	FXYD5	Q96DB9	178 aa		7.48	□□□□□ -1.21
MRPL55-223	ENST00000459783	KCNIP2	Q9NS61	270 aa		7.48	□□□□□ -1.21
MRPL55-223	ENST00000459783	CLEC5A	Q9NY25	188 aa		7.48	□□□□□ -1.21
MRPL55-223	ENST00000459783	TIMM9	Q9Y5J7	89 aa		7.48	□□□□□ -1.21
MRPL55-223	ENST00000459783	TRBV19	A0A075B6N1	114 aa		7.47	□□□□□ -1.21
MRPL55-223	ENST00000459783	SPRY2	O43597	315 aa		7.47	□□□□□ -1.21
MRPL55-223	ENST00000459783	FXYD7	P58549	80 aa		7.47	□□□□□ -1.21
MRPL55-223	ENST00000459783	ZNF266	Q14584	549 aa		7.47	□□□□□ -1.21
MRPL55-223	ENST00000459783	PSG3	Q16557	428 aa		7.47	□□□□□ -1.21
MRPL55-223	ENST00000459783	LCN15	Q6UWW0	184 aa		7.47	□□□□□ -1.21
MRPL55-223	ENST00000459783	SSX7	Q7RTT5	188 aa		7.47	□□□□□ -1.21
MRPL55-223	ENST00000459783	S100A7A	Q86SG5	101 aa		7.47	□□□□□ -1.21
MRPL55-223	ENST00000459783	KCNRG	Q8N5I3	272 aa		7.47	□□□□□ -1.21
MRPL55-223	ENST00000459783	OR2G3	Q8NGZ4	309 aa		7.47	□□□□□ -1.21
MRPL55-223	ENST00000459783	MRPL32	Q9BYC8	188 aa	Known RBP	7.47	□□□□□ -1.21
MRPL55-223	ENST00000459783	MFF	Q9GZY8	342 aa		7.47	□□□□□ -1.21
MRPL55-223	ENST00000459783	SLC35B3	Q9H1N7	401 aa		7.47	□□□□□ -1.21
MRPL55-223	ENST00000459783	RPRM	Q9NS64	109 aa		7.47	□□□□□ -1.21
MRPL55-223	ENST00000459783	PLA2G2E	Q9NZK7	142 aa		7.47	□□□□□ -1.21
MRPL55-223	ENST00000459783	TP53TG1	Q9Y2A0	90 aa		7.47	□□□□□ -1.21
MRPL55-223	ENST00000459783	HMSD	A8MTL9	139 aa		7.46	□□□□□ -1.22
MRPL55-223	ENST00000459783		M0R3E3	92 aa		7.46	□□□□□ -1.22
MRPL55-223	ENST00000459783	OR10J4	P0C629	311 aa		7.46	□□□□□ -1.22
MRPL55-223	ENST00000459783	HIST1H1E	P10412	219 aa	Known RBP	7.46	□□□□□ -1.22
MRPL55-223	ENST00000459783	SPP1	P10451	314 aa		7.46	□□□□□ -1.22
MRPL55-223	ENST00000459783	M6PR	P20645	277 aa		7.46	□□□□□ -1.22
MRPL55-223	ENST00000459783	CNN1	P51911	297 aa	Known RBP	7.46	□□□□□ -1.22
MRPL55-223	ENST00000459783	SAMD13	Q5VXD3	122 aa		7.46	□□□□□ -1.22
MRPL55-223	ENST00000459783	RPP25L	Q8N5L8	163 aa	Known RBP	7.46	□□□□□ -1.22
MRPL55-223	ENST00000459783	ZNF738	Q8NE65	137 aa		7.46	□□□□□ -1.22
MRPL55-223	ENST00000459783	OR4B1	Q8NGF8	309 aa		7.46	□□□□□ -1.22
MRPL55-223	ENST00000459783	PHYHIPL	Q96FC7	376 aa		7.46	□□□□□ -1.22
MRPL55-223	ENST00000459783	WWC2-AS2	Q96NR7	200 aa		7.46	□□□□□ -1.22
MRPL55-223	ENST00000459783	CLUHP3	Q96NS8	147 aa		7.46	□□□□□ -1.22
MRPL55-223	ENST00000459783	SLC50A1	Q9BRV3	221 aa		7.46	□□□□□ -1.22
MRPL55-223	ENST00000459783	PSMG3	Q9BT73	122 aa	Predicted RBP	7.46	□□□□□ -1.22
MRPL55-223	ENST00000459783	HMGB3	O15347	200 aa	Known RBP	7.45	□□□□□ -1.22
MRPL55-223	ENST00000459783	ZNF345	Q14585	488 aa		7.45	□□□□□ -1.22
MRPL55-223	ENST00000459783	ZNF726P1	Q15940	193 aa		7.45	□□□□□ -1.22
MRPL55-223	ENST00000459783	GUK1	Q16774	197 aa		7.45	□□□□□ -1.22
MRPL55-223	ENST00000459783	FAM122C	Q6P4D5	195 aa		7.45	□□□□□ -1.22
MRPL55-223	ENST00000459783	MORN3	Q6PF18	240 aa	Predicted RBP	7.45	□□□□□ -1.22
MRPL55-223	ENST00000459783	TCTE3	Q8IZS6	198 aa		7.45	□□□□□ -1.22
MRPL55-223	ENST00000459783	EXOC3-AS1	Q8N2X6	119 aa		7.45	□□□□□ -1.22
MRPL55-223	ENST00000459783	OR8A1	Q8NGG7	326 aa		7.45	□□□□□ -1.22
MRPL55-223	ENST00000459783	BLNK	Q8WV28	456 aa		7.45	□□□□□ -1.22
MRPL55-223	ENST00000459783	RPUSD4	Q96CM3	377 aa	Known RBP	7.45	□□□□□ -1.22
MRPL55-223	ENST00000459783	PAXX	Q9BUH6	204 aa		7.45	□□□□□ -1.22
MRPL55-223	ENST00000459783	OR51M1	Q9H341	326 aa		7.45	□□□□□ -1.22
MRPL55-223	ENST00000459783	XCL2	Q9UBD3	114 aa		7.45	□□□□□ -1.22
MRPL55-223	ENST00000459783	RNF24	Q9Y225	148 aa		7.45	□□□□□ -1.22
MRPL55-223	ENST00000459783		X6R8D5	127 aa		7.45	□□□□□ -1.22
MRPL55-223	ENST00000459783	CRX	O43186	299 aa	Predicted RBP	7.44	□□□□□ -1.22
MRPL55-223	ENST00000459783	ZNF253	O75346	499 aa		7.44	□□□□□ -1.22
MRPL55-223	ENST00000459783	NBEAP1	P0C6P0	100 aa		7.44	□□□□□ -1.22
MRPL55-223	ENST00000459783	RHOB	P62745	196 aa		7.44	□□□□□ -1.22
MRPL55-223	ENST00000459783	ACOT6	Q3I5F7	207 aa	Predicted RBP	7.44	□□□□□ -1.22
MRPL55-223	ENST00000459783	EBLN2	Q6P2I7	272 aa		7.44	□□□□□ -1.22
MRPL55-223	ENST00000459783	OR10G4	Q8NGN3	311 aa		7.44	□□□□□ -1.22
MRPL55-223	ENST00000459783	OR10G9	Q8NGN4	311 aa		7.44	□□□□□ -1.22
MRPL55-223	ENST00000459783	OR10G7	Q8NGN6	311 aa		7.44	□□□□□ -1.22
MRPL55-223	ENST00000459783	LRRC20	Q8TCA0	184 aa		7.44	□□□□□ -1.22
MRPL55-223	ENST00000459783	RNF141	Q8WVD5	230 aa		7.44	□□□□□ -1.22
MRPL55-223	ENST00000459783	BORCS7-ASMT	A0A0B4J1R7	106 aa		7.43	□□□□□ -1.22
MRPL55-223	ENST00000459783		A0A0J9YWU9	116 aa		7.43	□□□□□ -1.22
MRPL55-223	ENST00000459783	ZNF705E	A8MWA4	302 aa	Predicted RBP	7.43	□□□□□ -1.22
MRPL55-223	ENST00000459783		M0R2Z0	102 aa		7.43	□□□□□ -1.22
MRPL55-223	ENST00000459783	TAAR5	O14804	337 aa		7.43	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms