RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 VWC2Q2TAL6 325 aa11.63□□□□□ -0.55
COL7A1-203ENST00000459756 LINC00305Q7Z4B0 112 aa11.63□□□□□ -0.55
COL7A1-203ENST00000459756 SLC35B3Q9H1N7 401 aa11.63□□□□□ -0.55
COL7A1-203ENST00000459756 WDR83OSQ9Y284 106 aa11.63□□□□□ -0.55
COL7A1-203ENST00000459756 UBE2L5PA0A1B0GUS4 154 aa11.62□□□□□ -0.55
COL7A1-203ENST00000459756 A8MTW9 85 aa11.62□□□□□ -0.55
COL7A1-203ENST00000459756 DUSP14O95147 198 aaKnown RBP11.62□□□□□ -0.55
COL7A1-203ENST00000459756 HLA-DMBP28068 263 aa11.62□□□□□ -0.55
COL7A1-203ENST00000459756 NHLH2Q02577 135 aa11.62□□□□□ -0.55
COL7A1-203ENST00000459756 IGFL4Q6B9Z1 124 aa11.62□□□□□ -0.55
COL7A1-203ENST00000459756 RNF182Q8N6D2 247 aa11.62□□□□□ -0.55
COL7A1-203ENST00000459756 THAP6Q8TBB0 222 aa11.62□□□□□ -0.55
COL7A1-203ENST00000459756 C2CD4CQ8TF44 421 aa11.62□□□□□ -0.55
COL7A1-203ENST00000459756 RNF126Q9BV68 326 aa11.62□□□□□ -0.55
COL7A1-203ENST00000459756 SLC25A31Q9H0C2 315 aa11.62□□□□□ -0.55
COL7A1-203ENST00000459756 TCTAP57738 103 aa11.61□□□□□ -0.55
COL7A1-203ENST00000459756 C10orf113Q5VZT2 155 aa11.61□□□□□ -0.55
COL7A1-203ENST00000459756 Q6ZRG5 221 aa11.61□□□□□ -0.55
COL7A1-203ENST00000459756 ZNF738Q8NE65 137 aa11.61□□□□□ -0.55
COL7A1-203ENST00000459756 LRRC20Q8TCA0 184 aa11.61□□□□□ -0.55
COL7A1-203ENST00000459756 TMEM37Q8WXS4 190 aa11.61□□□□□ -0.55
COL7A1-203ENST00000459756 GOLT1BQ9Y3E0 138 aa11.61□□□□□ -0.55
COL7A1-203ENST00000459756 IGHV3OR16-12A0A075B7B8 117 aa11.6□□□□□ -0.55
COL7A1-203ENST00000459756 TMEM189A5PLL7 270 aa11.6□□□□□ -0.55
COL7A1-203ENST00000459756 MRPS12O15235 138 aaKnown RBP11.6□□□□□ -0.55
COL7A1-203ENST00000459756 GIPP09681 153 aaPredicted RBP11.6□□□□□ -0.55
COL7A1-203ENST00000459756 CXCL2P19875 107 aa11.6□□□□□ -0.55
COL7A1-203ENST00000459756 CNN1P51911 297 aaKnown RBP11.6□□□□□ -0.55
COL7A1-203ENST00000459756 PRR20EP86478 221 aa11.6□□□□□ -0.55
COL7A1-203ENST00000459756 PRR20CP86479 221 aa11.6□□□□□ -0.55
COL7A1-203ENST00000459756 PRR20DP86480 221 aa11.6□□□□□ -0.55
COL7A1-203ENST00000459756 PRR20BP86481 221 aa11.6□□□□□ -0.55
COL7A1-203ENST00000459756 PRR20AP86496 221 aa11.6□□□□□ -0.55
COL7A1-203ENST00000459756 BAXQ07812 192 aa11.6□□□□□ -0.55
COL7A1-203ENST00000459756 CLINT1Q14677 625 aa11.6□□□□□ -0.55
COL7A1-203ENST00000459756 ATP6V1FQ16864 119 aa11.6□□□□□ -0.55
COL7A1-203ENST00000459756 LCN15Q6UWW0 184 aa11.6□□□□□ -0.55
COL7A1-203ENST00000459756 AMTNQ6UX39 209 aa11.6□□□□□ -0.55
COL7A1-203ENST00000459756 BPIFA4PQ86YQ2 179 aa11.6□□□□□ -0.55
COL7A1-203ENST00000459756 OR5C1Q8NGR4 320 aa11.6□□□□□ -0.55
COL7A1-203ENST00000459756 SMIM3Q9BZL3 60 aa11.6□□□□□ -0.55
COL7A1-203ENST00000459756 DNAJC4Q9NNZ3 241 aa11.6□□□□□ -0.55
COL7A1-203ENST00000459756 RFNGQ9Y644 331 aa11.6□□□□□ -0.55
COL7A1-203ENST00000459756 TRAV10A0A0B4J240 114 aa11.59□□□□□ -0.55
COL7A1-203ENST00000459756 AMBPP02760 352 aa11.59□□□□□ -0.55
COL7A1-203ENST00000459756 RPL12P30050 165 aaKnown RBP11.59□□□□□ -0.55
COL7A1-203ENST00000459756 PSG3Q16557 428 aa11.59□□□□□ -0.55
COL7A1-203ENST00000459756 Q5BKY6 102 aa11.59□□□□□ -0.55
COL7A1-203ENST00000459756 MIC13Q5XKP0 118 aa11.59□□□□□ -0.55
COL7A1-203ENST00000459756 LGALS9CQ6DKI2 356 aa11.59□□□□□ -0.55
COL7A1-203ENST00000459756 Q6ZTC4 211 aa11.59□□□□□ -0.55
COL7A1-203ENST00000459756 OR1L4Q8NGR5 311 aa11.59□□□□□ -0.55
COL7A1-203ENST00000459756 CHAC2Q8WUX2 184 aa11.59□□□□□ -0.55
COL7A1-203ENST00000459756 PFDN5Q99471 154 aa11.59□□□□□ -0.55
COL7A1-203ENST00000459756 CELA1Q9UNI1 258 aa11.59□□□□□ -0.55
COL7A1-203ENST00000459756 hCG_2014768A0A024R1R8 64 aa11.58□□□□□ -0.56
COL7A1-203ENST00000459756 MPDU1O75352 247 aa11.58□□□□□ -0.56
COL7A1-203ENST00000459756 FGF7P21781 194 aa11.58□□□□□ -0.56
COL7A1-203ENST00000459756 RPL29P47914 159 aaKnown RBP11.58□□□□□ -0.56
COL7A1-203ENST00000459756 OPCMLQ14982 345 aa11.58□□□□□ -0.56
COL7A1-203ENST00000459756 C1orf158Q8N1D5 194 aa11.58□□□□□ -0.56
COL7A1-203ENST00000459756 OR2T35Q8NGX2 323 aa11.58□□□□□ -0.56
COL7A1-203ENST00000459756 IGF2BP2-AS1Q96M15 143 aa11.58□□□□□ -0.56
COL7A1-203ENST00000459756 SLC50A1Q9BRV3 221 aa11.58□□□□□ -0.56
COL7A1-203ENST00000459756 SLC39A9Q9NUM3 307 aa11.58□□□□□ -0.56
COL7A1-203ENST00000459756 FXYD6-FXYD2A0A087WZ82 144 aa11.57□□□□□ -0.56
COL7A1-203ENST00000459756 IGLL5B9A064 214 aa11.57□□□□□ -0.56
COL7A1-203ENST00000459756 SMLR1H3BR10 107 aa11.57□□□□□ -0.56
COL7A1-203ENST00000459756 HBE1P02100 147 aa11.57□□□□□ -0.56
COL7A1-203ENST00000459756 SPART-AS1P0CW21 52 aa11.57□□□□□ -0.56
COL7A1-203ENST00000459756 B2MP61769 119 aa11.57□□□□□ -0.56
COL7A1-203ENST00000459756 C12orf74Q32Q52 190 aa11.57□□□□□ -0.56
COL7A1-203ENST00000459756 MORN5Q5VZ52 161 aa11.57□□□□□ -0.56
COL7A1-203ENST00000459756 OR8A1Q8NGG7 326 aa11.57□□□□□ -0.56
COL7A1-203ENST00000459756 ZNF331Q9NQX6 463 aaPredicted RBP11.57□□□□□ -0.56
COL7A1-203ENST00000459756 HSPB11Q9Y547 144 aa11.57□□□□□ -0.56
COL7A1-203ENST00000459756 INSP01308 110 aa11.56□□□□□ -0.56
COL7A1-203ENST00000459756 IGLC2P0DOY2 106 aa11.56□□□□□ -0.56
COL7A1-203ENST00000459756 EMP1P54849 157 aa11.56□□□□□ -0.56
COL7A1-203ENST00000459756 HIST1H1AQ02539 215 aaPredicted RBP11.56□□□□□ -0.56
COL7A1-203ENST00000459756 SPINK13Q1W4C9 94 aa11.56□□□□□ -0.56
COL7A1-203ENST00000459756 ASB13Q8WXK3 278 aa11.56□□□□□ -0.56
COL7A1-203ENST00000459756 RPUSD4Q96CM3 377 aaKnown RBP11.56□□□□□ -0.56
COL7A1-203ENST00000459756 TMEM208Q9BTX3 173 aa11.56□□□□□ -0.56
COL7A1-203ENST00000459756 PXMP4Q9Y6I8 212 aa11.56□□□□□ -0.56
COL7A1-203ENST00000459756 TEX48A0A1B0GUV7 120 aa11.55□□□□□ -0.56
COL7A1-203ENST00000459756 BOLA2-SMG1P6H3BVE0 249 aa11.55□□□□□ -0.56
COL7A1-203ENST00000459756 M0R2Z0 102 aa11.55□□□□□ -0.56
COL7A1-203ENST00000459756 GUK1Q16774 197 aa11.55□□□□□ -0.56
COL7A1-203ENST00000459756 RRN3P1Q2M238 152 aa11.55□□□□□ -0.56
COL7A1-203ENST00000459756 ZNF767PQ75MW2 155 aa11.55□□□□□ -0.56
COL7A1-203ENST00000459756 NPCDR1Q9BY65 106 aa11.55□□□□□ -0.56
COL7A1-203ENST00000459756 DEFB131BA0A096LNP1 70 aa11.54□□□□□ -0.56
COL7A1-203ENST00000459756 LOC102723971A0A1B0GUV8 181 aa11.54□□□□□ -0.56
COL7A1-203ENST00000459756 H3BQ15 152 aa11.54□□□□□ -0.56
COL7A1-203ENST00000459756 CRXO43186 299 aaPredicted RBP11.54□□□□□ -0.56
COL7A1-203ENST00000459756 SNRPCP09234 159 aaKnown RBP11.54□□□□□ -0.56
COL7A1-203ENST00000459756 RHOBP62745 196 aa11.54□□□□□ -0.56
COL7A1-203ENST00000459756 ATP5SQ99766 215 aa11.54□□□□□ -0.56
COL7A1-203ENST00000459756 PPP1R14DQ9NXH3 145 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms