RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 FAM90A2PQ658T7 463 aa6.83□□□□□ -1.32
CDC42EP3-204ENST00000457889 LEMD1Q68G75 181 aa6.83□□□□□ -1.32
CDC42EP3-204ENST00000457889 C10orf99Q6UWK7 81 aa6.83□□□□□ -1.32
CDC42EP3-204ENST00000457889 LCNL1Q6ZST4 164 aa6.83□□□□□ -1.32
CDC42EP3-204ENST00000457889 SMIM7Q9BQ49 75 aa6.83□□□□□ -1.32
CDC42EP3-204ENST00000457889 SLC50A1Q9BRV3 221 aa6.83□□□□□ -1.32
CDC42EP3-204ENST00000457889 AAMDCQ9H7C9 122 aa6.83□□□□□ -1.32
CDC42EP3-204ENST00000457889 PRELID1Q9Y255 219 aa6.83□□□□□ -1.32
CDC42EP3-204ENST00000457889 RNF114Q9Y508 228 aa6.83□□□□□ -1.32
CDC42EP3-204ENST00000457889 ANK3Q12955 4377 aaKnown RBP6.83□□□□□ -1.32
CDC42EP3-204ENST00000457889 C2CD3Q4AC94 2353 aa6.82□□□□□ -1.32
CDC42EP3-204ENST00000457889 IGHV3-35A0A0C4DH35 117 aa6.82□□□□□ -1.32
CDC42EP3-204ENST00000457889 IGHV7-4-1A0A0J9YVY3 117 aa6.82□□□□□ -1.32
CDC42EP3-204ENST00000457889 ZNF320A2RRD8 509 aa6.82□□□□□ -1.32
CDC42EP3-204ENST00000457889 ZNF727A8MUV8 499 aa6.82□□□□□ -1.32
CDC42EP3-204ENST00000457889 B4DEV8 164 aa6.82□□□□□ -1.32
CDC42EP3-204ENST00000457889 C9JCJ5 164 aa6.82□□□□□ -1.32
CDC42EP3-204ENST00000457889 LINC01619G3V211 115 aa6.82□□□□□ -1.32
CDC42EP3-204ENST00000457889 M0QZ24 198 aa6.82□□□□□ -1.32
CDC42EP3-204ENST00000457889 HOXD3P31249 432 aaPredicted RBP6.82□□□□□ -1.32
CDC42EP3-204ENST00000457889 SUMO1P63165 101 aaKnown RBP6.82□□□□□ -1.32
CDC42EP3-204ENST00000457889 RHEBQ15382 184 aa6.82□□□□□ -1.32
CDC42EP3-204ENST00000457889 TCTEX1D4Q5JR98 221 aa6.82□□□□□ -1.32
CDC42EP3-204ENST00000457889 C16orf54Q6UWD8 224 aa6.82□□□□□ -1.32
CDC42EP3-204ENST00000457889 UNQ9165/PRO28630Q6UXU0 137 aa6.82□□□□□ -1.32
CDC42EP3-204ENST00000457889 Q71RC1 249 aaPredicted RBP6.82□□□□□ -1.32
CDC42EP3-204ENST00000457889 KRTAP19-1Q8IUB9 90 aa6.82□□□□□ -1.32
CDC42EP3-204ENST00000457889 KLHL30-AS1Q8NEE0 82 aa6.82□□□□□ -1.32
CDC42EP3-204ENST00000457889 CMTM2Q8TAZ6 248 aa6.82□□□□□ -1.32
CDC42EP3-204ENST00000457889 GLMPQ8WWB7 406 aa6.82□□□□□ -1.32
CDC42EP3-204ENST00000457889 DPF1Q92782 380 aa6.82□□□□□ -1.32
CDC42EP3-204ENST00000457889 MRPL53Q96EL3 112 aaKnown RBP6.82□□□□□ -1.32
CDC42EP3-204ENST00000457889 SMIM12Q96EX1 92 aa6.82□□□□□ -1.32
CDC42EP3-204ENST00000457889 ATG101Q9BSB4 218 aa6.82□□□□□ -1.32
CDC42EP3-204ENST00000457889 PARLQ9H300 379 aa6.82□□□□□ -1.32
CDC42EP3-204ENST00000457889 Q9H3A6 140 aa6.82□□□□□ -1.32
CDC42EP3-204ENST00000457889 ZNF586Q9NXT0 402 aa6.82□□□□□ -1.32
CDC42EP3-204ENST00000457889 PEMTQ9UBM1 199 aa6.82□□□□□ -1.32
CDC42EP3-204ENST00000457889 NAT8Q9UHE5 227 aa6.82□□□□□ -1.32
CDC42EP3-204ENST00000457889 LY96Q9Y6Y9 160 aa6.82□□□□□ -1.32
CDC42EP3-204ENST00000457889 IGHV4OR15-8A0A075B7B6 117 aa6.81□□□□□ -1.32
CDC42EP3-204ENST00000457889 A0A087WW49 117 aa6.81□□□□□ -1.32
CDC42EP3-204ENST00000457889 H3BQ15 152 aa6.81□□□□□ -1.32
CDC42EP3-204ENST00000457889 K7EQM0 130 aa6.81□□□□□ -1.32
CDC42EP3-204ENST00000457889 PEX7O00628 323 aa6.81□□□□□ -1.32
CDC42EP3-204ENST00000457889 CSN1S1P47710 185 aa6.81□□□□□ -1.32
CDC42EP3-204ENST00000457889 CNN1P51911 297 aaKnown RBP6.81□□□□□ -1.32
CDC42EP3-204ENST00000457889 CEBPGP53567 150 aa6.81□□□□□ -1.32
CDC42EP3-204ENST00000457889 TAS2R60P59551 318 aa6.81□□□□□ -1.32
CDC42EP3-204ENST00000457889 RANP62826 216 aaKnown RBP6.81□□□□□ -1.32
CDC42EP3-204ENST00000457889 FOXL1Q12952 345 aa6.81□□□□□ -1.32
CDC42EP3-204ENST00000457889 FHL3Q13643 280 aa6.81□□□□□ -1.32
CDC42EP3-204ENST00000457889 KLF5Q13887 457 aaPredicted RBP6.81□□□□□ -1.32
CDC42EP3-204ENST00000457889 TMEM241Q24JQ0 296 aa6.81□□□□□ -1.32
CDC42EP3-204ENST00000457889 KHDC1LQ5JSQ8 128 aa6.81□□□□□ -1.32
CDC42EP3-204ENST00000457889 SIGLEC15Q6ZMC9 328 aa6.81□□□□□ -1.32
CDC42EP3-204ENST00000457889 OR1N2Q8NGR9 330 aa6.81□□□□□ -1.32
CDC42EP3-204ENST00000457889 C2CD4CQ8TF44 421 aa6.81□□□□□ -1.32
CDC42EP3-204ENST00000457889 BLNKQ8WV28 456 aa6.81□□□□□ -1.32
CDC42EP3-204ENST00000457889 TVP23CQ96ET8 276 aa6.81□□□□□ -1.32
CDC42EP3-204ENST00000457889 OR5B12Q96R08 314 aa6.81□□□□□ -1.32
CDC42EP3-204ENST00000457889 SMPXQ9UHP9 88 aa6.81□□□□□ -1.32
CDC42EP3-204ENST00000457889 SETD2Q9BYW2 2564 aaPredicted RBP6.8□□□□□ -1.32
CDC42EP3-204ENST00000457889 TRBV6-1A0A0K0K1D8 114 aa6.8□□□□□ -1.32
CDC42EP3-204ENST00000457889 TMEM213A2RRL7 107 aa6.8□□□□□ -1.32
CDC42EP3-204ENST00000457889 PGPA6NDG6 321 aa6.8□□□□□ -1.32
CDC42EP3-204ENST00000457889 ZNF785A8K8V0 405 aa6.8□□□□□ -1.32
CDC42EP3-204ENST00000457889 NDUFB4O95168 129 aa6.8□□□□□ -1.32
CDC42EP3-204ENST00000457889 SLC25A5P05141 298 aaKnown RBP6.8□□□□□ -1.32
CDC42EP3-204ENST00000457889 AKR1C3P42330 323 aa6.8□□□□□ -1.32
CDC42EP3-204ENST00000457889 NDUFA11Q86Y39 141 aa6.8□□□□□ -1.32
CDC42EP3-204ENST00000457889 CLRN3Q8NCR9 226 aa6.8□□□□□ -1.32
CDC42EP3-204ENST00000457889 FMC1Q96HJ9 113 aa6.8□□□□□ -1.32
CDC42EP3-204ENST00000457889 RHPN1-AS1Q9BWJ2 59 aa6.8□□□□□ -1.32
CDC42EP3-204ENST00000457889 ZNF331Q9NQX6 463 aaPredicted RBP6.8□□□□□ -1.32
CDC42EP3-204ENST00000457889 EPDR1Q9UM22 224 aa6.8□□□□□ -1.32
CDC42EP3-204ENST00000457889 KLF12Q9Y4X4 402 aa6.8□□□□□ -1.32
CDC42EP3-204ENST00000457889 MAST4O15021 2626 aa6.8□□□□□ -1.32
CDC42EP3-204ENST00000457889 IGHV3OR16-8A0A075B7F1 116 aa6.79□□□□□ -1.32
CDC42EP3-204ENST00000457889 A0A087WWC5 75 aa6.79□□□□□ -1.32
CDC42EP3-204ENST00000457889 CHEK1O14757 476 aa6.79□□□□□ -1.32
CDC42EP3-204ENST00000457889 TCRAP04437 139 aa6.79□□□□□ -1.32
CDC42EP3-204ENST00000457889 RPL35P42766 123 aaKnown RBP6.79□□□□□ -1.32
CDC42EP3-204ENST00000457889 SYNJ2BPP57105 145 aa6.79□□□□□ -1.32
CDC42EP3-204ENST00000457889 GUCA2BQ16661 112 aa6.79□□□□□ -1.32
CDC42EP3-204ENST00000457889 TMEM183BQ1AE95 376 aa6.79□□□□□ -1.32
CDC42EP3-204ENST00000457889 ZNF674Q2M3X9 581 aa6.79□□□□□ -1.32
CDC42EP3-204ENST00000457889 OR11H1Q8NG94 326 aa6.79□□□□□ -1.32
CDC42EP3-204ENST00000457889 SDF2L1Q9HCN8 221 aa6.79□□□□□ -1.32
CDC42EP3-204ENST00000457889 NRN1Q9NPD7 142 aa6.79□□□□□ -1.32
CDC42EP3-204ENST00000457889 BIN3Q9NQY0 253 aa6.79□□□□□ -1.32
CDC42EP3-204ENST00000457889 SIGLEC8Q9NYZ4 499 aa6.79□□□□□ -1.32
CDC42EP3-204ENST00000457889 TRAV2A0A0B4J234 112 aa6.78□□□□□ -1.32
CDC42EP3-204ENST00000457889 RBAKDNA6NC62 111 aa6.78□□□□□ -1.32
CDC42EP3-204ENST00000457889 C2orf70A6NJV1 201 aa6.78□□□□□ -1.32
CDC42EP3-204ENST00000457889 M0R036 132 aa6.78□□□□□ -1.32
CDC42EP3-204ENST00000457889 CCL24O00175 119 aa6.78□□□□□ -1.32
CDC42EP3-204ENST00000457889 ISLRO14498 428 aa6.78□□□□□ -1.32
CDC42EP3-204ENST00000457889 ZNF207O43670 478 aaKnown RBP6.78□□□□□ -1.32
CDC42EP3-204ENST00000457889 CD28P10747 220 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms