RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 A0A0A6YYD4 124 aa4.31□□□□□ -1.72
CSMD3-204ENST00000455883 PIN1P1O15428 100 aa4.31□□□□□ -1.72
CSMD3-204ENST00000455883 GFRA1P56159 465 aa4.31□□□□□ -1.72
CSMD3-204ENST00000455883 GATD1Q8NB37 220 aa4.31□□□□□ -1.72
CSMD3-204ENST00000455883 SMIM27A0A1W2PRY6 76 aa4.31□□□□□ -1.72
CSMD3-204ENST00000455883 M0R381 172 aa4.31□□□□□ -1.72
CSMD3-204ENST00000455883 DEFB109BQ30KR1 87 aa4.31□□□□□ -1.72
CSMD3-204ENST00000455883 NUP35Q8NFH5 326 aa4.31□□□□□ -1.72
CSMD3-204ENST00000455883 DAZ1Q9NQZ3 744 aaKnown RBP4.31□□□□□ -1.72
CSMD3-204ENST00000455883 IGHV2-26A0A0B4J1V2 119 aa4.31□□□□□ -1.72
CSMD3-204ENST00000455883 CGAP01215 116 aa4.31□□□□□ -1.72
CSMD3-204ENST00000455883 IGKV1-8A0A0C4DH67 115 aa4.3□□□□□ -1.72
CSMD3-204ENST00000455883 TMEM14BQ9NUH8 114 aa4.3□□□□□ -1.72
CSMD3-204ENST00000455883 CENPVQ7Z7K6 275 aaPredicted RBP4.3□□□□□ -1.72
CSMD3-204ENST00000455883 CHD6Q8TD26 2715 aa4.3□□□□□ -1.72
CSMD3-204ENST00000455883 IGHV3-20A0A0C4DH32 117 aa4.3□□□□□ -1.72
CSMD3-204ENST00000455883 PAX9P55771 341 aa4.3□□□□□ -1.72
CSMD3-204ENST00000455883 SS18Q15532 418 aa4.3□□□□□ -1.72
CSMD3-204ENST00000455883 DEFB119Q8N690 84 aa4.3□□□□□ -1.72
CSMD3-204ENST00000455883 C1QCP02747 245 aa4.3□□□□□ -1.72
CSMD3-204ENST00000455883 TRGV3P03979 118 aa4.3□□□□□ -1.72
CSMD3-204ENST00000455883 CFHR2P36980 270 aa4.3□□□□□ -1.72
CSMD3-204ENST00000455883 GCSAMLQ5JQS6 135 aa4.3□□□□□ -1.72
CSMD3-204ENST00000455883 TRAV14DV4A0A0A6YYC5 116 aa4.3□□□□□ -1.72
CSMD3-204ENST00000455883 ETV2O00321 342 aaPredicted RBP4.3□□□□□ -1.72
CSMD3-204ENST00000455883 CCL2P13500 99 aa4.3□□□□□ -1.72
CSMD3-204ENST00000455883 ADMP35318 185 aa4.3□□□□□ -1.72
CSMD3-204ENST00000455883 C1orf122Q6ZSJ8 110 aa4.3□□□□□ -1.72
CSMD3-204ENST00000455883 SMIM2Q9BVW6 85 aa4.3□□□□□ -1.72
CSMD3-204ENST00000455883 FAM74A4Q5TZK3 123 aa4.3□□□□□ -1.72
CSMD3-204ENST00000455883 CCL4L1Q8NHW4 92 aa4.3□□□□□ -1.72
CSMD3-204ENST00000455883 EGR1P18146 543 aa4.3□□□□□ -1.72
CSMD3-204ENST00000455883 TGIF1Q15583 401 aa4.3□□□□□ -1.72
CSMD3-204ENST00000455883 DUX5Q96PT3 197 aa4.3□□□□□ -1.72
CSMD3-204ENST00000455883 SCO2A0A1W2PP80 73 aa4.3□□□□□ -1.72
CSMD3-204ENST00000455883 DMRTC2Q8IXT2 367 aaPredicted RBP4.3□□□□□ -1.72
CSMD3-204ENST00000455883 IGHV3-15A0A0B4J1V0 119 aa4.3□□□□□ -1.72
CSMD3-204ENST00000455883 A0A0J9YW62 118 aa4.3□□□□□ -1.72
CSMD3-204ENST00000455883 TMEM155Q4W5P6 130 aa4.3□□□□□ -1.72
CSMD3-204ENST00000455883 CRYGSP22914 178 aa4.29□□□□□ -1.72
CSMD3-204ENST00000455883 PAX8Q06710 450 aa4.29□□□□□ -1.72
CSMD3-204ENST00000455883 CXorf67Q86X51 503 aaPredicted RBP4.29□□□□□ -1.72
CSMD3-204ENST00000455883 Q8N8P6 123 aa4.29□□□□□ -1.72
CSMD3-204ENST00000455883 COL6A5A8TX70 2615 aa4.29□□□□□ -1.72
CSMD3-204ENST00000455883 HELZ2Q9BYK8 2649 aaKnown RBP4.29□□□□□ -1.72
CSMD3-204ENST00000455883 SPATA12Q7Z6I5 190 aa4.29□□□□□ -1.72
CSMD3-204ENST00000455883 ZCCHC24Q8N2G6 241 aaKnown RBP4.29□□□□□ -1.72
CSMD3-204ENST00000455883 BEX4Q9NWD9 120 aaPredicted RBP4.29□□□□□ -1.72
CSMD3-204ENST00000455883 CHCHD2Q9Y6H1 151 aaPredicted RBP4.29□□□□□ -1.72
CSMD3-204ENST00000455883 C17orf100A8MU93 164 aa4.29□□□□□ -1.72
CSMD3-204ENST00000455883 ZC2HC1BQ5TFG8 222 aa4.29□□□□□ -1.72
CSMD3-204ENST00000455883 IGHV3-43A0A0B4J1X8 118 aa4.29□□□□□ -1.72
CSMD3-204ENST00000455883 IGHV3-43DP0DP04 118 aa4.29□□□□□ -1.72
CSMD3-204ENST00000455883 TDGF1P13385 188 aa4.29□□□□□ -1.72
CSMD3-204ENST00000455883 LINC00311Q8N616 119 aa4.29□□□□□ -1.72
CSMD3-204ENST00000455883 CSTL1Q9H114 145 aa4.29□□□□□ -1.72
CSMD3-204ENST00000455883 RNF114Q9Y508 228 aa4.29□□□□□ -1.72
CSMD3-204ENST00000455883 I3L3M4 83 aa4.29□□□□□ -1.72
CSMD3-204ENST00000455883 DEFB125Q8N687 156 aa4.29□□□□□ -1.72
CSMD3-204ENST00000455883 FNDC4Q9H6D8 234 aaPredicted RBP4.29□□□□□ -1.72
CSMD3-204ENST00000455883 KNCNA6PVL3 124 aa4.29□□□□□ -1.72
CSMD3-204ENST00000455883 NPYP01303 97 aa4.29□□□□□ -1.72
CSMD3-204ENST00000455883 MRAPQ8TCY5 172 aa4.29□□□□□ -1.72
CSMD3-204ENST00000455883 PROB1E7EW31 1015 aa4.29□□□□□ -1.72
CSMD3-204ENST00000455883 SAA2P0DJI9 122 aaPredicted RBP4.29□□□□□ -1.72
CSMD3-204ENST00000455883 DMRTC1Q5HYR2 192 aa4.29□□□□□ -1.72
CSMD3-204ENST00000455883 FAM104BQ5XKR9 115 aa4.29□□□□□ -1.72
CSMD3-204ENST00000455883 PMS2CLQ68D20 193 aa4.29□□□□□ -1.72
CSMD3-204ENST00000455883 CCDC140Q96MF4 163 aa4.29□□□□□ -1.72
CSMD3-204ENST00000455883 MBNL3Q9NUK0 354 aaKnown RBP4.29□□□□□ -1.72
CSMD3-204ENST00000455883 FBXL7Q9UJT9 491 aa4.29□□□□□ -1.72
CSMD3-204ENST00000455883 F6UB75 175 aa4.29□□□□□ -1.72
CSMD3-204ENST00000455883 ZNF524Q96C55 264 aa4.29□□□□□ -1.72
CSMD3-204ENST00000455883 PRSS22Q9GZN4 317 aa4.29□□□□□ -1.72
CSMD3-204ENST00000455883 TRGV2A0A075B6R0 118 aa4.29□□□□□ -1.72
CSMD3-204ENST00000455883 IGHG2P01859 326 aa4.29□□□□□ -1.72
CSMD3-204ENST00000455883 OCC1Q8TAD7 63 aa4.29□□□□□ -1.72
CSMD3-204ENST00000455883 A0A0J9YXY3 114 aa4.29□□□□□ -1.72
CSMD3-204ENST00000455883 TRBV6-1A0A0K0K1D8 114 aa4.29□□□□□ -1.72
CSMD3-204ENST00000455883 IGLC2P0DOY2 106 aa4.29□□□□□ -1.72
CSMD3-204ENST00000455883 IGLC3P0DOY3 106 aa4.29□□□□□ -1.72
CSMD3-204ENST00000455883 CCL4P13236 92 aa4.29□□□□□ -1.72
CSMD3-204ENST00000455883 LMO1P25800 156 aa4.29□□□□□ -1.72
CSMD3-204ENST00000455883 GUSBP11Q6P575 273 aa4.29□□□□□ -1.72
CSMD3-204ENST00000455883 PPP1R32Q7Z5V6 425 aa4.29□□□□□ -1.72
CSMD3-204ENST00000455883 LIME1Q9H400 295 aa4.29□□□□□ -1.72
CSMD3-204ENST00000455883 NTN3O00634 580 aaPredicted RBP4.28□□□□□ -1.72
CSMD3-204ENST00000455883 CXCL1P09341 107 aa4.28□□□□□ -1.72
CSMD3-204ENST00000455883 SPINK14Q6IE38 97 aa4.28□□□□□ -1.72
CSMD3-204ENST00000455883 ADAMTSL5Q6ZMM2 481 aa4.28□□□□□ -1.72
CSMD3-204ENST00000455883 RPP25LQ8N5L8 163 aaKnown RBP4.28□□□□□ -1.72
CSMD3-204ENST00000455883 C10orf105Q8TEF2 133 aa4.28□□□□□ -1.72
CSMD3-204ENST00000455883 RNF185Q96GF1 192 aa4.28□□□□□ -1.72
CSMD3-204ENST00000455883 TAX1BP3O14907 124 aa4.28□□□□□ -1.72
CSMD3-204ENST00000455883 CD7P09564 240 aa4.28□□□□□ -1.72
CSMD3-204ENST00000455883 C15orf53Q8NAA6 179 aa4.28□□□□□ -1.72
CSMD3-204ENST00000455883 DCTN5Q9BTE1 182 aa4.28□□□□□ -1.72
CSMD3-204ENST00000455883 D6R8Y8 96 aa4.28□□□□□ -1.72
CSMD3-204ENST00000455883 INS-IGF2F8WCM5 200 aa4.28□□□□□ -1.72
CSMD3-204ENST00000455883 CTSBP07858 339 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms