RNA–Protein interactions for RNA: ENST00000455069.1

HDAC9-217, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-217ENST00000455069 DNAJC4Q9NNZ3 241 aa8.21□□□□□ -1.1
HDAC9-217ENST00000455069 HSPB11Q9Y547 144 aa8.21□□□□□ -1.1
HDAC9-217ENST00000455069 X6R8D5 127 aa8.21□□□□□ -1.1
HDAC9-217ENST00000455069 A8MTW9 85 aa8.2□□□□□ -1.1
HDAC9-217ENST00000455069 ZNF705EA8MWA4 302 aaPredicted RBP8.2□□□□□ -1.1
HDAC9-217ENST00000455069 H3BTX0 84 aa8.2□□□□□ -1.1
HDAC9-217ENST00000455069 SLC17A3O00476 420 aa8.2□□□□□ -1.1
HDAC9-217ENST00000455069 IGLC2P0DOY2 106 aa8.2□□□□□ -1.1
HDAC9-217ENST00000455069 RPL12P30050 165 aaKnown RBP8.2□□□□□ -1.1
HDAC9-217ENST00000455069 FXYD7P58549 80 aa8.2□□□□□ -1.1
HDAC9-217ENST00000455069 OXA1LQ15070 435 aa8.2□□□□□ -1.1
HDAC9-217ENST00000455069 RGS21Q2M5E4 152 aa8.2□□□□□ -1.1
HDAC9-217ENST00000455069 TMEM41BQ5BJD5 291 aa8.2□□□□□ -1.1
HDAC9-217ENST00000455069 Q5BKY6 102 aa8.2□□□□□ -1.1
HDAC9-217ENST00000455069 FAM78BQ5VT40 261 aa8.2□□□□□ -1.1
HDAC9-217ENST00000455069 AMTNQ6UX39 209 aa8.2□□□□□ -1.1
HDAC9-217ENST00000455069 Q6ZRG5 221 aa8.2□□□□□ -1.1
HDAC9-217ENST00000455069 Q8NAQ8 132 aa8.2□□□□□ -1.1
HDAC9-217ENST00000455069 CLUHP3Q96NS8 147 aa8.2□□□□□ -1.1
HDAC9-217ENST00000455069 ATP5SQ99766 215 aa8.2□□□□□ -1.1
HDAC9-217ENST00000455069 SMIM3Q9BZL3 60 aa8.2□□□□□ -1.1
HDAC9-217ENST00000455069 MED28Q9H204 178 aa8.2□□□□□ -1.1
HDAC9-217ENST00000455069 C11orf68Q9H3H3 251 aaKnown RBP8.2□□□□□ -1.1
HDAC9-217ENST00000455069 WFDC1Q9HC57 220 aa8.2□□□□□ -1.1
HDAC9-217ENST00000455069 RPRMQ9NS64 109 aa8.2□□□□□ -1.1
HDAC9-217ENST00000455069 XCL2Q9UBD3 114 aa8.2□□□□□ -1.1
HDAC9-217ENST00000455069 H3BQ15 152 aa8.19□□□□□ -1.1
HDAC9-217ENST00000455069 DEFB4AO15263 64 aa8.19□□□□□ -1.1
HDAC9-217ENST00000455069 ZNF705DP0CH99 300 aaPredicted RBP8.19□□□□□ -1.1
HDAC9-217ENST00000455069 ZNF705BP0CI00 300 aaPredicted RBP8.19□□□□□ -1.1
HDAC9-217ENST00000455069 C4orf48Q5BLP8 95 aa8.19□□□□□ -1.1
HDAC9-217ENST00000455069 SPATA31B1PQ5VZV4 182 aa8.19□□□□□ -1.1
HDAC9-217ENST00000455069 S100A7AQ86SG5 101 aa8.19□□□□□ -1.1
HDAC9-217ENST00000455069 BPIFA4PQ86YQ2 179 aa8.19□□□□□ -1.1
HDAC9-217ENST00000455069 OR4B1Q8NGF8 309 aa8.19□□□□□ -1.1
HDAC9-217ENST00000455069 OR1L4Q8NGR5 311 aa8.19□□□□□ -1.1
HDAC9-217ENST00000455069 PFDN5Q99471 154 aa8.19□□□□□ -1.1
HDAC9-217ENST00000455069 SLC35B3Q9H1N7 401 aa8.19□□□□□ -1.1
HDAC9-217ENST00000455069 ZNF331Q9NQX6 463 aaPredicted RBP8.19□□□□□ -1.1
HDAC9-217ENST00000455069 RFNGQ9Y644 331 aa8.19□□□□□ -1.1
HDAC9-217ENST00000455069 BIRC6Q9NR09 4857 aa8.18□□□□□ -1.1
HDAC9-217ENST00000455069 IGHV4-28A0A0C4DH34 117 aa8.18□□□□□ -1.1
HDAC9-217ENST00000455069 RBMY1A1P0DJD3 496 aaKnown RBP8.18□□□□□ -1.1
HDAC9-217ENST00000455069 RBMY1CP0DJD4 496 aa8.18□□□□□ -1.1
HDAC9-217ENST00000455069 CXCL2P19875 107 aa8.18□□□□□ -1.1
HDAC9-217ENST00000455069 CNN1P51911 297 aaKnown RBP8.18□□□□□ -1.1
HDAC9-217ENST00000455069 RBMY1FQ15415 496 aaKnown RBP8.18□□□□□ -1.1
HDAC9-217ENST00000455069 EBLN2Q6P2I7 272 aa8.18□□□□□ -1.1
HDAC9-217ENST00000455069 LCN15Q6UWW0 184 aa8.18□□□□□ -1.1
HDAC9-217ENST00000455069 SAT2Q96F10 170 aaPredicted RBP8.18□□□□□ -1.1
HDAC9-217ENST00000455069 RNF24Q9Y225 148 aa8.18□□□□□ -1.1
HDAC9-217ENST00000455069 G3V3Q6 166 aa8.17□□□□□ -1.1
HDAC9-217ENST00000455069 GIPP09681 153 aaPredicted RBP8.17□□□□□ -1.1
HDAC9-217ENST00000455069 PYYP10082 97 aa8.17□□□□□ -1.1
HDAC9-217ENST00000455069 NUTF2P61970 127 aaKnown RBP8.17□□□□□ -1.1
HDAC9-217ENST00000455069 PSG9Q00887 426 aa8.17□□□□□ -1.1
HDAC9-217ENST00000455069 PMS2P11Q13670 270 aa8.17□□□□□ -1.1
HDAC9-217ENST00000455069 PSG3Q16557 428 aa8.17□□□□□ -1.1
HDAC9-217ENST00000455069 ZNF705AQ6ZN79 300 aaPredicted RBP8.17□□□□□ -1.1
HDAC9-217ENST00000455069 ZNF738Q8NE65 137 aa8.17□□□□□ -1.1
HDAC9-217ENST00000455069 FAM167A-AS1Q96KT0 104 aa8.17□□□□□ -1.1
HDAC9-217ENST00000455069 SLC25A2Q9BXI2 301 aa8.17□□□□□ -1.1
HDAC9-217ENST00000455069 HRH4Q9H3N8 390 aa8.17□□□□□ -1.1
HDAC9-217ENST00000455069 ZNF586Q9NXT0 402 aa8.17□□□□□ -1.1
HDAC9-217ENST00000455069 HYDINQ4G0P3 5121 aa8.16□□□□□ -1.1
HDAC9-217ENST00000455069 ZNF705FA8MVS1 300 aaPredicted RBP8.16□□□□□ -1.1
HDAC9-217ENST00000455069 MIFP14174 115 aa8.16□□□□□ -1.1
HDAC9-217ENST00000455069 MIR17HGQ75NE6 70 aa8.16□□□□□ -1.1
HDAC9-217ENST00000455069 C1orf158Q8N1D5 194 aa8.16□□□□□ -1.1
HDAC9-217ENST00000455069 OR8A1Q8NGG7 326 aa8.16□□□□□ -1.1
HDAC9-217ENST00000455069 SLC50A1Q9BRV3 221 aa8.16□□□□□ -1.1
HDAC9-217ENST00000455069 C1QTNF4Q9BXJ3 329 aa8.16□□□□□ -1.1
HDAC9-217ENST00000455069 PARD6GQ9BYG4 376 aaPredicted RBP8.16□□□□□ -1.1
HDAC9-217ENST00000455069 MFFQ9GZY8 342 aa8.16□□□□□ -1.1
HDAC9-217ENST00000455069 TRBV19A0A075B6N1 114 aa8.15□□□□□ -1.1
HDAC9-217ENST00000455069 PRAC2D3DTV9 90 aa8.15□□□□□ -1.1
HDAC9-217ENST00000455069 M0R2Z0 102 aa8.15□□□□□ -1.1
HDAC9-217ENST00000455069 CRXO43186 299 aaPredicted RBP8.15□□□□□ -1.1
HDAC9-217ENST00000455069 NDUFB4O95168 129 aa8.15□□□□□ -1.1
HDAC9-217ENST00000455069 NANOS2P60321 138 aaKnown RBP8.15□□□□□ -1.1
HDAC9-217ENST00000455069 HIST1H1AQ02539 215 aaPredicted RBP8.15□□□□□ -1.1
HDAC9-217ENST00000455069 SPINK13Q1W4C9 94 aa8.15□□□□□ -1.1
HDAC9-217ENST00000455069 RPUSD4Q96CM3 377 aaKnown RBP8.15□□□□□ -1.1
HDAC9-217ENST00000455069 AQP10Q96PS8 301 aa8.15□□□□□ -1.1
HDAC9-217ENST00000455069 KCNIP2Q9NS61 270 aa8.15□□□□□ -1.1
HDAC9-217ENST00000455069 TMEM14CQ9P0S9 112 aa8.15□□□□□ -1.1
HDAC9-217ENST00000455069 PLECQ15149 4684 aaKnown RBP8.15□□□□□ -1.1
HDAC9-217ENST00000455069 RNF222A6NCQ9 220 aa8.14□□□□□ -1.11
HDAC9-217ENST00000455069 CXorf65A6NEN9 183 aa8.14□□□□□ -1.11
HDAC9-217ENST00000455069 C17orf112F2Z3M2 114 aa8.14□□□□□ -1.11
HDAC9-217ENST00000455069 DUSP14O95147 198 aaKnown RBP8.14□□□□□ -1.11
HDAC9-217ENST00000455069 GUK1Q16774 197 aa8.14□□□□□ -1.11
HDAC9-217ENST00000455069 FFAR4Q5NUL3 377 aa8.14□□□□□ -1.11
HDAC9-217ENST00000455069 BAP18Q8IXM2 172 aa8.14□□□□□ -1.11
HDAC9-217ENST00000455069 LRRC20Q8TCA0 184 aa8.14□□□□□ -1.11
HDAC9-217ENST00000455069 ZNF503Q96F45 646 aa8.14□□□□□ -1.11
HDAC9-217ENST00000455069 CELA1Q9UNI1 258 aa8.14□□□□□ -1.11
HDAC9-217ENST00000455069 FUT9Q9Y231 359 aa8.14□□□□□ -1.11
HDAC9-217ENST00000455069 IGHV3OR16-12A0A075B7B8 117 aa8.13□□□□□ -1.11
HDAC9-217ENST00000455069 BOLA2-SMG1P6H3BVE0 249 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms