RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 RPL7L1Q6DKI1 246 aaKnown RBP20.54■□□□□ 0.88
SMARCC1-203ENST00000454240 HSD17B11Q8NBQ5 300 aa20.54■□□□□ 0.88
SMARCC1-203ENST00000454240 SAT2Q96F10 170 aaPredicted RBP20.54■□□□□ 0.88
SMARCC1-203ENST00000454240 SLC25A2Q9BXI2 301 aa20.54■□□□□ 0.88
SMARCC1-203ENST00000454240 FUT9Q9Y231 359 aa20.54■□□□□ 0.88
SMARCC1-203ENST00000454240 HLA-DRB4X5D2U9 266 aa20.54■□□□□ 0.88
SMARCC1-203ENST00000454240 ATP6V0CP27449 155 aa20.53■□□□□ 0.88
SMARCC1-203ENST00000454240 GUK1Q16774 197 aa20.53■□□□□ 0.88
SMARCC1-203ENST00000454240 RNF182Q8N6D2 247 aa20.53■□□□□ 0.88
SMARCC1-203ENST00000454240 LRRC20Q8TCA0 184 aa20.53■□□□□ 0.88
SMARCC1-203ENST00000454240 PSMG3Q9BT73 122 aaPredicted RBP20.53■□□□□ 0.88
SMARCC1-203ENST00000454240 ZNF331Q9NQX6 463 aaPredicted RBP20.53■□□□□ 0.88
SMARCC1-203ENST00000454240 TAAR5O14804 337 aa20.52■□□□□ 0.88
SMARCC1-203ENST00000454240 OR2G3Q8NGZ4 309 aa20.52■□□□□ 0.88
SMARCC1-203ENST00000454240 OVOL2Q9BRP0 275 aa20.52■□□□□ 0.88
SMARCC1-203ENST00000454240 SLC50A1Q9BRV3 221 aa20.52■□□□□ 0.88
SMARCC1-203ENST00000454240 ZNF586Q9NXT0 402 aa20.52■□□□□ 0.88
SMARCC1-203ENST00000454240 BORCS7-ASMTA0A0B4J1R7 106 aa20.51■□□□□ 0.87
SMARCC1-203ENST00000454240 HIST1H1EP10412 219 aaKnown RBP20.51■□□□□ 0.87
SMARCC1-203ENST00000454240 SPP1P10451 314 aa20.51■□□□□ 0.87
SMARCC1-203ENST00000454240 M6PRP20645 277 aa20.51■□□□□ 0.87
SMARCC1-203ENST00000454240 HLA-DMBP28068 263 aa20.51■□□□□ 0.87
SMARCC1-203ENST00000454240 ZNF345Q14585 488 aa20.51■□□□□ 0.87
SMARCC1-203ENST00000454240 ACOT6Q3I5F7 207 aaPredicted RBP20.51■□□□□ 0.87
SMARCC1-203ENST00000454240 MORN3Q6PF18 240 aaPredicted RBP20.51■□□□□ 0.87
SMARCC1-203ENST00000454240 TP53TG1Q9Y2A0 90 aa20.51■□□□□ 0.87
SMARCC1-203ENST00000454240 A0A0J9YX75 114 aa20.5■□□□□ 0.87
SMARCC1-203ENST00000454240 F6UB75 175 aa20.5■□□□□ 0.87
SMARCC1-203ENST00000454240 H3BTX0 84 aa20.5■□□□□ 0.87
SMARCC1-203ENST00000454240 SLC17A3O00476 420 aa20.5■□□□□ 0.87
SMARCC1-203ENST00000454240 GIG44P09565 113 aaPredicted RBP20.5■□□□□ 0.87
SMARCC1-203ENST00000454240 PYYP10082 97 aa20.5■□□□□ 0.87
SMARCC1-203ENST00000454240 RHOBP62745 196 aa20.5■□□□□ 0.87
SMARCC1-203ENST00000454240 PSG3Q16557 428 aa20.5■□□□□ 0.87
SMARCC1-203ENST00000454240 DEFB135Q30KP9 77 aa20.5■□□□□ 0.87
SMARCC1-203ENST00000454240 KCNRGQ8N5I3 272 aa20.5■□□□□ 0.87
SMARCC1-203ENST00000454240 CLUHP3Q96NS8 147 aa20.5■□□□□ 0.87
SMARCC1-203ENST00000454240 CYTL1Q9NRR1 136 aa20.5■□□□□ 0.87
SMARCC1-203ENST00000454240 CA1P00915 261 aaPredicted RBP20.49■□□□□ 0.87
SMARCC1-203ENST00000454240 EBLN2Q6P2I7 272 aa20.49■□□□□ 0.87
SMARCC1-203ENST00000454240 TCTE3Q8IZS6 198 aa20.49■□□□□ 0.87
SMARCC1-203ENST00000454240 RNF183Q96D59 192 aa20.49■□□□□ 0.87
SMARCC1-203ENST00000454240 TRBV19A0A075B6N1 114 aa20.48■□□□□ 0.87
SMARCC1-203ENST00000454240 SPRY2O43597 315 aa20.48■□□□□ 0.87
SMARCC1-203ENST00000454240 ZNF253O75346 499 aa20.48■□□□□ 0.87
SMARCC1-203ENST00000454240 JTBO76095 146 aa20.48■□□□□ 0.87
SMARCC1-203ENST00000454240 SERF2P84101 59 aa20.48■□□□□ 0.87
SMARCC1-203ENST00000454240 GNPNAT1Q96EK6 184 aaPredicted RBP20.48■□□□□ 0.87
SMARCC1-203ENST00000454240 SH3BGRL3Q9H299 93 aa20.48■□□□□ 0.87
SMARCC1-203ENST00000454240 OR51M1Q9H341 326 aa20.48■□□□□ 0.87
SMARCC1-203ENST00000454240 hCG_2014768A0A024R1R8 64 aa20.47■□□□□ 0.87
SMARCC1-203ENST00000454240 RAB2AP61019 212 aa20.47■□□□□ 0.87
SMARCC1-203ENST00000454240 ZNF738Q8NE65 137 aa20.47■□□□□ 0.87
SMARCC1-203ENST00000454240 CLEC5AQ9NY25 188 aa20.47■□□□□ 0.87
SMARCC1-203ENST00000454240 C4BPBP20851 252 aa20.46■□□□□ 0.87
SMARCC1-203ENST00000454240 PDE6HQ13956 83 aa20.46■□□□□ 0.87
SMARCC1-203ENST00000454240 TMEM41BQ5BJD5 291 aa20.46■□□□□ 0.87
SMARCC1-203ENST00000454240 OR10G4Q8NGN3 311 aa20.46■□□□□ 0.87
SMARCC1-203ENST00000454240 OR10G9Q8NGN4 311 aa20.46■□□□□ 0.87
SMARCC1-203ENST00000454240 OR10G7Q8NGN6 311 aa20.46■□□□□ 0.87
SMARCC1-203ENST00000454240 ZNF503Q96F45 646 aa20.46■□□□□ 0.87
SMARCC1-203ENST00000454240 PAXXQ9BUH6 204 aa20.46■□□□□ 0.87
SMARCC1-203ENST00000454240 A0A0D9SG52 128 aa20.45■□□□□ 0.86
SMARCC1-203ENST00000454240 A8MTW9 85 aa20.45■□□□□ 0.86
SMARCC1-203ENST00000454240 NDUFB4O95168 129 aa20.45■□□□□ 0.86
SMARCC1-203ENST00000454240 NUTF2P61970 127 aaKnown RBP20.45■□□□□ 0.86
SMARCC1-203ENST00000454240 FXYD5Q96DB9 178 aa20.45■□□□□ 0.86
SMARCC1-203ENST00000454240 STAB2Q8WWQ8 2551 aa20.45■□□□□ 0.86
SMARCC1-203ENST00000454240 IGKV3-20P01619 116 aa20.44■□□□□ 0.86
SMARCC1-203ENST00000454240 NBEAP1P0C6P0 100 aa20.44■□□□□ 0.86
SMARCC1-203ENST00000454240 TAS2R45P59539 299 aa20.44■□□□□ 0.86
SMARCC1-203ENST00000454240 OR4B1Q8NGF8 309 aa20.44■□□□□ 0.86
SMARCC1-203ENST00000454240 RNF141Q8WVD5 230 aa20.44■□□□□ 0.86
SMARCC1-203ENST00000454240 WWC2-AS2Q96NR7 200 aa20.44■□□□□ 0.86
SMARCC1-203ENST00000454240 ARPC5LQ9BPX5 153 aa20.44■□□□□ 0.86
SMARCC1-203ENST00000454240 A0A1W2PPV4 95 aa20.43■□□□□ 0.86
SMARCC1-203ENST00000454240 OR7C2O60412 319 aa20.43■□□□□ 0.86
SMARCC1-203ENST00000454240 MBP02144 154 aa20.43■□□□□ 0.86
SMARCC1-203ENST00000454240 KHDC3LQ587J8 217 aa20.43■□□□□ 0.86
SMARCC1-203ENST00000454240 FAM122CQ6P4D5 195 aa20.43■□□□□ 0.86
SMARCC1-203ENST00000454240 RPUSD4Q96CM3 377 aaKnown RBP20.43■□□□□ 0.86
SMARCC1-203ENST00000454240 DUSP14O95147 198 aaKnown RBP20.42■□□□□ 0.86
SMARCC1-203ENST00000454240 OR10J4P0C629 311 aa20.42■□□□□ 0.86
SMARCC1-203ENST00000454240 RPP25LQ8N5L8 163 aaKnown RBP20.42■□□□□ 0.86
SMARCC1-203ENST00000454240 OR8A1Q8NGG7 326 aa20.42■□□□□ 0.86
SMARCC1-203ENST00000454240 BLNKQ8WV28 456 aa20.42■□□□□ 0.86
SMARCC1-203ENST00000454240 EDA2RQ9HAV5 297 aa20.42■□□□□ 0.86
SMARCC1-203ENST00000454240 ZNF705FA8MVS1 300 aaPredicted RBP20.41■□□□□ 0.86
SMARCC1-203ENST00000454240 EIF3GO75821 320 aaKnown RBP eCLIP20.41■□□□□ 0.86
SMARCC1-203ENST00000454240 ZNF705DP0CH99 300 aaPredicted RBP20.41■□□□□ 0.86
SMARCC1-203ENST00000454240 ZNF705BP0CI00 300 aaPredicted RBP20.41■□□□□ 0.86
SMARCC1-203ENST00000454240 CNN1P51911 297 aaKnown RBP20.41■□□□□ 0.86
SMARCC1-203ENST00000454240 PSG9Q00887 426 aa20.41■□□□□ 0.86
SMARCC1-203ENST00000454240 AKAP14Q86UN6 197 aa20.41■□□□□ 0.86
SMARCC1-203ENST00000454240 CSNK1G2-AS1Q8NCQ2 148 aa20.41■□□□□ 0.86
SMARCC1-203ENST00000454240 A0A1B0GVG6 124 aa20.4■□□□□ 0.86
SMARCC1-203ENST00000454240 AMTNQ6UX39 209 aa20.4■□□□□ 0.86
SMARCC1-203ENST00000454240 C1QTNF4Q9BXJ3 329 aa20.4■□□□□ 0.86
SMARCC1-203ENST00000454240 C1QBP02746 253 aa20.39■□□□□ 0.85
SMARCC1-203ENST00000454240 CDC34P49427 236 aaPredicted RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms