RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 ATP6V1FQ16864 119 aa10.48□□□□□ -0.73
HSPG2-207ENST00000453796 STX12Q86Y82 276 aa10.48□□□□□ -0.73
HSPG2-207ENST00000453796 C1orf158Q8N1D5 194 aa10.48□□□□□ -0.73
HSPG2-207ENST00000453796 OR5AC2Q9NZP5 309 aa10.48□□□□□ -0.73
HSPG2-207ENST00000453796 CELA1Q9UNI1 258 aa10.48□□□□□ -0.73
HSPG2-207ENST00000453796 UBE2L5PA0A1B0GUS4 154 aa10.47□□□□□ -0.73
HSPG2-207ENST00000453796 CXCL2P19875 107 aa10.47□□□□□ -0.73
HSPG2-207ENST00000453796 CNN1P51911 297 aaKnown RBP10.47□□□□□ -0.73
HSPG2-207ENST00000453796 NHLH2Q02577 135 aa10.47□□□□□ -0.73
HSPG2-207ENST00000453796 RAB31Q13636 194 aa10.47□□□□□ -0.73
HSPG2-207ENST00000453796 PSG3Q16557 428 aa10.47□□□□□ -0.73
HSPG2-207ENST00000453796 C10orf113Q5VZT2 155 aa10.47□□□□□ -0.73
HSPG2-207ENST00000453796 OR11H7Q8NGC8 314 aa10.47□□□□□ -0.73
HSPG2-207ENST00000453796 DNAJC4Q9NNZ3 241 aa10.47□□□□□ -0.73
HSPG2-207ENST00000453796 SMIM9A6NGZ8 99 aa10.46□□□□□ -0.73
HSPG2-207ENST00000453796 E5RGE8 158 aa10.46□□□□□ -0.73
HSPG2-207ENST00000453796 DUSP14O95147 198 aaKnown RBP10.46□□□□□ -0.73
HSPG2-207ENST00000453796 CYCSP99999 105 aaKnown RBP10.46□□□□□ -0.73
HSPG2-207ENST00000453796 BAXQ07812 192 aa10.46□□□□□ -0.73
HSPG2-207ENST00000453796 Q6ZRG5 221 aa10.46□□□□□ -0.73
HSPG2-207ENST00000453796 Q6ZTC4 211 aa10.46□□□□□ -0.73
HSPG2-207ENST00000453796 BPIFA4PQ86YQ2 179 aa10.46□□□□□ -0.73
HSPG2-207ENST00000453796 ZNF331Q9NQX6 463 aaPredicted RBP10.46□□□□□ -0.73
HSPG2-207ENST00000453796 C11orf94C9JXX5 98 aa10.45□□□□□ -0.74
HSPG2-207ENST00000453796 CRXO43186 299 aaPredicted RBP10.45□□□□□ -0.74
HSPG2-207ENST00000453796 RLN2P04090 185 aa10.45□□□□□ -0.74
HSPG2-207ENST00000453796 IGLC2P0DOY2 106 aa10.45□□□□□ -0.74
HSPG2-207ENST00000453796 FGF7P21781 194 aa10.45□□□□□ -0.74
HSPG2-207ENST00000453796 B2MP61769 119 aa10.45□□□□□ -0.74
HSPG2-207ENST00000453796 LRRC37A5PQ49AS3 106 aa10.45□□□□□ -0.74
HSPG2-207ENST00000453796 LCN15Q6UWW0 184 aa10.45□□□□□ -0.74
HSPG2-207ENST00000453796 ZNF738Q8NE65 137 aa10.45□□□□□ -0.74
HSPG2-207ENST00000453796 OR1L4Q8NGR5 311 aa10.45□□□□□ -0.74
HSPG2-207ENST00000453796 PPP1R1CQ8WVI7 109 aa10.45□□□□□ -0.74
HSPG2-207ENST00000453796 SAT2Q96F10 170 aaPredicted RBP10.45□□□□□ -0.74
HSPG2-207ENST00000453796 IGF2BP2-AS1Q96M15 143 aa10.45□□□□□ -0.74
HSPG2-207ENST00000453796 PFDN5Q99471 154 aa10.45□□□□□ -0.74
HSPG2-207ENST00000453796 SLC50A1Q9BRV3 221 aa10.45□□□□□ -0.74
HSPG2-207ENST00000453796 SLC39A9Q9NUM3 307 aa10.45□□□□□ -0.74
HSPG2-207ENST00000453796 VPS13DQ5THJ4 4388 aa10.44□□□□□ -0.74
HSPG2-207ENST00000453796 IGHV3OR16-12A0A075B7B8 117 aa10.44□□□□□ -0.74
HSPG2-207ENST00000453796 TRAV5A0A0B4J249 113 aa10.44□□□□□ -0.74
HSPG2-207ENST00000453796 SLC17A3O00476 420 aa10.44□□□□□ -0.74
HSPG2-207ENST00000453796 MPDU1O75352 247 aa10.44□□□□□ -0.74
HSPG2-207ENST00000453796 LY6G6CO95867 125 aa10.44□□□□□ -0.74
HSPG2-207ENST00000453796 C12orf74Q32Q52 190 aa10.44□□□□□ -0.74
HSPG2-207ENST00000453796 OR8A1Q8NGG7 326 aa10.44□□□□□ -0.74
HSPG2-207ENST00000453796 OR5C1Q8NGR4 320 aa10.44□□□□□ -0.74
HSPG2-207ENST00000453796 C2CD4CQ8TF44 421 aa10.44□□□□□ -0.74
HSPG2-207ENST00000453796 RNF126Q9BV68 326 aa10.44□□□□□ -0.74
HSPG2-207ENST00000453796 NPCDR1Q9BY65 106 aa10.44□□□□□ -0.74
HSPG2-207ENST00000453796 SLC25A31Q9H0C2 315 aa10.44□□□□□ -0.74
HSPG2-207ENST00000453796 PXMP4Q9Y6I8 212 aa10.44□□□□□ -0.74
HSPG2-207ENST00000453796 TMEM189A5PLL7 270 aa10.43□□□□□ -0.74
HSPG2-207ENST00000453796 H3BQ15 152 aa10.43□□□□□ -0.74
HSPG2-207ENST00000453796 M0R2Z0 102 aa10.43□□□□□ -0.74
HSPG2-207ENST00000453796 AMBPP02760 352 aa10.43□□□□□ -0.74
HSPG2-207ENST00000453796 SNRPCP09234 159 aaKnown RBP10.43□□□□□ -0.74
HSPG2-207ENST00000453796 SPINK13Q1W4C9 94 aa10.43□□□□□ -0.74
HSPG2-207ENST00000453796 LRRC20Q8TCA0 184 aa10.43□□□□□ -0.74
HSPG2-207ENST00000453796 APLNQ9ULZ1 77 aa10.43□□□□□ -0.74
HSPG2-207ENST00000453796 GOLT1BQ9Y3E0 138 aa10.43□□□□□ -0.74
HSPG2-207ENST00000453796 RFNGQ9Y644 331 aa10.43□□□□□ -0.74
HSPG2-207ENST00000453796 TRAV10A0A0B4J240 114 aa10.42□□□□□ -0.74
HSPG2-207ENST00000453796 H3BTX0 84 aa10.42□□□□□ -0.74
HSPG2-207ENST00000453796 MPC2O95563 127 aa10.42□□□□□ -0.74
HSPG2-207ENST00000453796 PRB4P10163 310 aaPredicted RBP10.42□□□□□ -0.74
HSPG2-207ENST00000453796 TCTAP57738 103 aa10.42□□□□□ -0.74
HSPG2-207ENST00000453796 LGALS9CQ6DKI2 356 aa10.42□□□□□ -0.74
HSPG2-207ENST00000453796 ZNF767PQ75MW2 155 aa10.42□□□□□ -0.74
HSPG2-207ENST00000453796 RPUSD4Q96CM3 377 aaKnown RBP10.42□□□□□ -0.74
HSPG2-207ENST00000453796 DNAH6Q9C0G6 4158 aa10.42□□□□□ -0.74
HSPG2-207ENST00000453796 BOLA2-SMG1P6H3BVE0 249 aa10.41□□□□□ -0.74
HSPG2-207ENST00000453796 SSNA1O43805 119 aa10.41□□□□□ -0.74
HSPG2-207ENST00000453796 HIST1H1AQ02539 215 aaPredicted RBP10.41□□□□□ -0.74
HSPG2-207ENST00000453796 GUK1Q16774 197 aa10.41□□□□□ -0.74
HSPG2-207ENST00000453796 GCSAMLQ5JQS6 135 aa10.41□□□□□ -0.74
HSPG2-207ENST00000453796 BAP18Q8IXM2 172 aa10.41□□□□□ -0.74
HSPG2-207ENST00000453796 THAP6Q8TBB0 222 aa10.41□□□□□ -0.74
HSPG2-207ENST00000453796 WDR61Q9GZS3 305 aaKnown RBP10.41□□□□□ -0.74
HSPG2-207ENST00000453796 ZNF586Q9NXT0 402 aa10.41□□□□□ -0.74
HSPG2-207ENST00000453796 LOC102723971A0A1B0GUV8 181 aa10.4□□□□□ -0.74
HSPG2-207ENST00000453796 IGLL5B9A064 214 aa10.4□□□□□ -0.74
HSPG2-207ENST00000453796 PRAC2D3DTV9 90 aa10.4□□□□□ -0.74
HSPG2-207ENST00000453796 ZNF253O75346 499 aa10.4□□□□□ -0.74
HSPG2-207ENST00000453796 HBE1P02100 147 aa10.4□□□□□ -0.74
HSPG2-207ENST00000453796 SPART-AS1P0CW21 52 aa10.4□□□□□ -0.74
HSPG2-207ENST00000453796 CLINT1Q14677 625 aa10.4□□□□□ -0.74
HSPG2-207ENST00000453796 RRN3P1Q2M238 152 aa10.4□□□□□ -0.74
HSPG2-207ENST00000453796 TMEM14CQ9P0S9 112 aa10.4□□□□□ -0.74
HSPG2-207ENST00000453796 DKK2Q9UBU2 259 aa10.4□□□□□ -0.74
HSPG2-207ENST00000453796 HSPB11Q9Y547 144 aa10.4□□□□□ -0.74
HSPG2-207ENST00000453796 TRAV12-2A0A075B6T6 113 aa10.39□□□□□ -0.75
HSPG2-207ENST00000453796 PTTG1O95997 202 aa10.39□□□□□ -0.75
HSPG2-207ENST00000453796 INSP01308 110 aa10.39□□□□□ -0.75
HSPG2-207ENST00000453796 EMP1P54849 157 aa10.39□□□□□ -0.75
HSPG2-207ENST00000453796 FAM222AQ5U5X8 452 aa10.39□□□□□ -0.75
HSPG2-207ENST00000453796 ALG5Q9Y673 324 aa10.39□□□□□ -0.75
HSPG2-207ENST00000453796 TRBV19A0A075B6N1 114 aa10.38□□□□□ -0.75
HSPG2-207ENST00000453796 IGHV4-4A0A075B6R2 117 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms