RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 HBG2P69892 147 aa12.63□□□□□ -0.39
FAM3A-216ENST00000449971 Q6ZRG5 221 aa12.63□□□□□ -0.39
FAM3A-216ENST00000449971 ZNF709Q8N972 641 aa12.63□□□□□ -0.39
FAM3A-216ENST00000449971 ZNF738Q8NE65 137 aa12.63□□□□□ -0.39
FAM3A-216ENST00000449971 HRH4Q9H3N8 390 aa12.63□□□□□ -0.39
FAM3A-216ENST00000449971 WDR83OSQ9Y284 106 aa12.63□□□□□ -0.39
FAM3A-216ENST00000449971 DYNC1H1Q14204 4646 aaKnown RBP12.62□□□□□ -0.39
FAM3A-216ENST00000449971 ZNF705DP0CH99 300 aaPredicted RBP12.62□□□□□ -0.39
FAM3A-216ENST00000449971 ZNF705BP0CI00 300 aaPredicted RBP12.62□□□□□ -0.39
FAM3A-216ENST00000449971 HLA-DMBP28068 263 aa12.62□□□□□ -0.39
FAM3A-216ENST00000449971 BAXQ07812 192 aa12.62□□□□□ -0.39
FAM3A-216ENST00000449971 C10orf113Q5VZT2 155 aa12.62□□□□□ -0.39
FAM3A-216ENST00000449971 MIC13Q5XKP0 118 aa12.62□□□□□ -0.39
FAM3A-216ENST00000449971 TMEM37Q8WXS4 190 aa12.62□□□□□ -0.39
FAM3A-216ENST00000449971 DNAJC4Q9NNZ3 241 aa12.62□□□□□ -0.39
FAM3A-216ENST00000449971 A0A087X0K7 114 aa12.61□□□□□ -0.39
FAM3A-216ENST00000449971 UBE2L5PA0A1B0GUS4 154 aa12.61□□□□□ -0.39
FAM3A-216ENST00000449971 DUSP14O95147 198 aaKnown RBP12.61□□□□□ -0.39
FAM3A-216ENST00000449971 SNRPCP09234 159 aaKnown RBP12.61□□□□□ -0.39
FAM3A-216ENST00000449971 ATP6V1FQ16864 119 aa12.61□□□□□ -0.39
FAM3A-216ENST00000449971 VWC2Q2TAL6 325 aa12.61□□□□□ -0.39
FAM3A-216ENST00000449971 LRRC37A5PQ49AS3 106 aa12.61□□□□□ -0.39
FAM3A-216ENST00000449971 ZNF705AQ6ZN79 300 aaPredicted RBP12.61□□□□□ -0.39
FAM3A-216ENST00000449971 MARVELD1Q9BSK0 173 aa12.61□□□□□ -0.39
FAM3A-216ENST00000449971 ABCA13Q86UQ4 5058 aa12.61□□□□□ -0.39
FAM3A-216ENST00000449971 ZNF705FA8MVS1 300 aaPredicted RBP12.6□□□□□ -0.39
FAM3A-216ENST00000449971 MRPS12O15235 138 aaKnown RBP12.6□□□□□ -0.39
FAM3A-216ENST00000449971 CXCL3P19876 107 aa12.6□□□□□ -0.39
FAM3A-216ENST00000449971 CNN1P51911 297 aaKnown RBP12.6□□□□□ -0.39
FAM3A-216ENST00000449971 CYCSP99999 105 aaKnown RBP12.6□□□□□ -0.39
FAM3A-216ENST00000449971 PSG3Q16557 428 aa12.6□□□□□ -0.39
FAM3A-216ENST00000449971 BPIFA4PQ86YQ2 179 aa12.6□□□□□ -0.39
FAM3A-216ENST00000449971 NEU1Q99519 415 aa12.6□□□□□ -0.39
FAM3A-216ENST00000449971 NMES1Q9C002 83 aa12.6□□□□□ -0.39
FAM3A-216ENST00000449971 GOLT1BQ9Y3E0 138 aa12.6□□□□□ -0.39
FAM3A-216ENST00000449971 SMIM9A6NGZ8 99 aa12.59□□□□□ -0.39
FAM3A-216ENST00000449971 C11orf94C9JXX5 98 aa12.59□□□□□ -0.39
FAM3A-216ENST00000449971 E5RGE8 158 aa12.59□□□□□ -0.39
FAM3A-216ENST00000449971 SSNA1O43805 119 aa12.59□□□□□ -0.39
FAM3A-216ENST00000449971 MED14OSP0DP75 135 aa12.59□□□□□ -0.39
FAM3A-216ENST00000449971 FGF7P21781 194 aa12.59□□□□□ -0.39
FAM3A-216ENST00000449971 RPL29P47914 159 aaKnown RBP12.59□□□□□ -0.39
FAM3A-216ENST00000449971 EMP1P54849 157 aa12.59□□□□□ -0.39
FAM3A-216ENST00000449971 NHLH2Q02577 135 aa12.59□□□□□ -0.39
FAM3A-216ENST00000449971 OPCMLQ14982 345 aa12.59□□□□□ -0.39
FAM3A-216ENST00000449971 MORN5Q5VZ52 161 aa12.59□□□□□ -0.39
FAM3A-216ENST00000449971 AMTNQ6UX39 209 aa12.59□□□□□ -0.39
FAM3A-216ENST00000449971 OR1L4Q8NGR5 311 aa12.59□□□□□ -0.39
FAM3A-216ENST00000449971 SLC25A31Q9H0C2 315 aa12.59□□□□□ -0.39
FAM3A-216ENST00000449971 SLC39A9Q9NUM3 307 aa12.59□□□□□ -0.39
FAM3A-216ENST00000449971 OR5AC2Q9NZP5 309 aa12.59□□□□□ -0.39
FAM3A-216ENST00000449971 CELA1Q9UNI1 258 aa12.59□□□□□ -0.39
FAM3A-216ENST00000449971 DNAH17Q9UFH2 4485 aa12.59□□□□□ -0.39
FAM3A-216ENST00000449971 TRAV5A0A0B4J249 113 aa12.58□□□□□ -0.4
FAM3A-216ENST00000449971 A8MTW9 85 aa12.58□□□□□ -0.4
FAM3A-216ENST00000449971 H3BTX0 84 aa12.58□□□□□ -0.4
FAM3A-216ENST00000449971 B2MP61769 119 aa12.58□□□□□ -0.4
FAM3A-216ENST00000449971 HIST1H1AQ02539 215 aaPredicted RBP12.58□□□□□ -0.4
FAM3A-216ENST00000449971 Q6ZTC4 211 aa12.58□□□□□ -0.4
FAM3A-216ENST00000449971 LINC00336Q6ZUF6 198 aa12.58□□□□□ -0.4
FAM3A-216ENST00000449971 ZNF767PQ75MW2 155 aa12.58□□□□□ -0.4
FAM3A-216ENST00000449971 C1orf158Q8N1D5 194 aa12.58□□□□□ -0.4
FAM3A-216ENST00000449971 OR11H7Q8NGC8 314 aa12.58□□□□□ -0.4
FAM3A-216ENST00000449971 APLNQ9ULZ1 77 aa12.58□□□□□ -0.4
FAM3A-216ENST00000449971 RFNGQ9Y644 331 aa12.58□□□□□ -0.4
FAM3A-216ENST00000449971 TRAV10A0A0B4J240 114 aa12.57□□□□□ -0.4
FAM3A-216ENST00000449971 H0YIZ8 118 aa12.57□□□□□ -0.4
FAM3A-216ENST00000449971 AMBPP02760 352 aa12.57□□□□□ -0.4
FAM3A-216ENST00000449971 PRB4P10163 310 aaPredicted RBP12.57□□□□□ -0.4
FAM3A-216ENST00000449971 CXCL2P19875 107 aa12.57□□□□□ -0.4
FAM3A-216ENST00000449971 RHOBP62745 196 aa12.57□□□□□ -0.4
FAM3A-216ENST00000449971 SPINK13Q1W4C9 94 aa12.57□□□□□ -0.4
FAM3A-216ENST00000449971 C12orf74Q32Q52 190 aa12.57□□□□□ -0.4
FAM3A-216ENST00000449971 LCN15Q6UWW0 184 aa12.57□□□□□ -0.4
FAM3A-216ENST00000449971 OR8A1Q8NGG7 326 aa12.57□□□□□ -0.4
FAM3A-216ENST00000449971 RPUSD4Q96CM3 377 aaKnown RBP12.57□□□□□ -0.4
FAM3A-216ENST00000449971 IGF2BP2-AS1Q96M15 143 aa12.57□□□□□ -0.4
FAM3A-216ENST00000449971 PFDN5Q99471 154 aa12.57□□□□□ -0.4
FAM3A-216ENST00000449971 TMEM208Q9BTX3 173 aa12.57□□□□□ -0.4
FAM3A-216ENST00000449971 PPP1R14DQ9NXH3 145 aa12.57□□□□□ -0.4
FAM3A-216ENST00000449971 PXMP4Q9Y6I8 212 aa12.57□□□□□ -0.4
FAM3A-216ENST00000449971 TMEM189A5PLL7 270 aa12.56□□□□□ -0.4
FAM3A-216ENST00000449971 M0R2Z0 102 aa12.56□□□□□ -0.4
FAM3A-216ENST00000449971 HBE1P02100 147 aa12.56□□□□□ -0.4
FAM3A-216ENST00000449971 H2BFSP57053 126 aa12.56□□□□□ -0.4
FAM3A-216ENST00000449971 OR5C1Q8NGR4 320 aa12.56□□□□□ -0.4
FAM3A-216ENST00000449971 THAP6Q8TBB0 222 aa12.56□□□□□ -0.4
FAM3A-216ENST00000449971 CHAC2Q8WUX2 184 aa12.56□□□□□ -0.4
FAM3A-216ENST00000449971 SLC50A1Q9BRV3 221 aa12.56□□□□□ -0.4
FAM3A-216ENST00000449971 ZNF331Q9NQX6 463 aaPredicted RBP12.56□□□□□ -0.4
FAM3A-216ENST00000449971 DNAH11Q96DT5 4516 aa12.55□□□□□ -0.4
FAM3A-216ENST00000449971 A0A1B0GVY2 172 aa12.55□□□□□ -0.4
FAM3A-216ENST00000449971 H3BQ15 152 aa12.55□□□□□ -0.4
FAM3A-216ENST00000449971 M0R2N4 97 aa12.55□□□□□ -0.4
FAM3A-216ENST00000449971 MPDU1O75352 247 aa12.55□□□□□ -0.4
FAM3A-216ENST00000449971 SPART-AS1P0CW21 52 aa12.55□□□□□ -0.4
FAM3A-216ENST00000449971 TCTAP57738 103 aa12.55□□□□□ -0.4
FAM3A-216ENST00000449971 CLINT1Q14677 625 aa12.55□□□□□ -0.4
FAM3A-216ENST00000449971 PPP1R1CQ8WVI7 109 aa12.55□□□□□ -0.4
FAM3A-216ENST00000449971 PRSS29PA6NIE9 313 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms