RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 EBLN2Q6P2I7 272 aa10.65□□□□□ -0.7
USP39-206ENST00000448971 BPIFA4PQ86YQ2 179 aa10.65□□□□□ -0.7
USP39-206ENST00000448971 OR11H7Q8NGC8 314 aa10.65□□□□□ -0.7
USP39-206ENST00000448971 TMEM37Q8WXS4 190 aa10.65□□□□□ -0.7
USP39-206ENST00000448971 ATP5SQ99766 215 aa10.65□□□□□ -0.7
USP39-206ENST00000448971 RARRES2Q99969 163 aa10.65□□□□□ -0.7
USP39-206ENST00000448971 SMIM3Q9BZL3 60 aa10.65□□□□□ -0.7
USP39-206ENST00000448971 SAV1Q9H4B6 383 aaPredicted RBP10.65□□□□□ -0.7
USP39-206ENST00000448971 HSPB11Q9Y547 144 aa10.65□□□□□ -0.7
USP39-206ENST00000448971 A0A087X0K7 114 aa10.64□□□□□ -0.71
USP39-206ENST00000448971 H3BMM0 161 aa10.64□□□□□ -0.71
USP39-206ENST00000448971 GDF5OSQ5U4N7 250 aa10.64□□□□□ -0.71
USP39-206ENST00000448971 MORN5Q5VZ52 161 aa10.64□□□□□ -0.71
USP39-206ENST00000448971 IGFL4Q6B9Z1 124 aa10.64□□□□□ -0.71
USP39-206ENST00000448971 ZNF709Q8N972 641 aa10.64□□□□□ -0.71
USP39-206ENST00000448971 OR4B1Q8NGF8 309 aa10.64□□□□□ -0.71
USP39-206ENST00000448971 OR11H2Q8NH07 326 aa10.64□□□□□ -0.71
USP39-206ENST00000448971 RNF126Q9BV68 326 aa10.64□□□□□ -0.71
USP39-206ENST00000448971 WDR61Q9GZS3 305 aaKnown RBP10.64□□□□□ -0.71
USP39-206ENST00000448971 C17orf112F2Z3M2 114 aa10.63□□□□□ -0.71
USP39-206ENST00000448971 F6UB75 175 aa10.63□□□□□ -0.71
USP39-206ENST00000448971 LCN15Q6UWW0 184 aa10.63□□□□□ -0.71
USP39-206ENST00000448971 RNF182Q8N6D2 247 aa10.63□□□□□ -0.71
USP39-206ENST00000448971 ZNF738Q8NE65 137 aa10.63□□□□□ -0.71
USP39-206ENST00000448971 C20orf173Q96LM9 149 aa10.63□□□□□ -0.71
USP39-206ENST00000448971 C17orf77Q96MU5 243 aa10.63□□□□□ -0.71
USP39-206ENST00000448971 C1QTNF4Q9BXJ3 329 aa10.63□□□□□ -0.71
USP39-206ENST00000448971 DNAJC4Q9NNZ3 241 aa10.63□□□□□ -0.71
USP39-206ENST00000448971 CLEC5AQ9NY25 188 aa10.63□□□□□ -0.71
USP39-206ENST00000448971 TRAV8-2A0A0B4J237 113 aa10.62□□□□□ -0.71
USP39-206ENST00000448971 IFNA5P01569 189 aa10.62□□□□□ -0.71
USP39-206ENST00000448971 SNRPCP09234 159 aaKnown RBP10.62□□□□□ -0.71
USP39-206ENST00000448971 CXCL2P19875 107 aa10.62□□□□□ -0.71
USP39-206ENST00000448971 OXA1LQ15070 435 aa10.62□□□□□ -0.71
USP39-206ENST00000448971 SPATA31B1PQ5VZV4 182 aa10.62□□□□□ -0.71
USP39-206ENST00000448971 CHAC2Q8WUX2 184 aa10.62□□□□□ -0.71
USP39-206ENST00000448971 HERC2O95714 4834 aa10.61□□□□□ -0.71
USP39-206ENST00000448971 A0A0J9YX75 114 aa10.61□□□□□ -0.71
USP39-206ENST00000448971 H3BTX0 84 aa10.61□□□□□ -0.71
USP39-206ENST00000448971 MRPS12O15235 138 aaKnown RBP10.61□□□□□ -0.71
USP39-206ENST00000448971 GIPP09681 153 aaPredicted RBP10.61□□□□□ -0.71
USP39-206ENST00000448971 FXYD7P58549 80 aa10.61□□□□□ -0.71
USP39-206ENST00000448971 FAM78BQ5VT40 261 aa10.61□□□□□ -0.71
USP39-206ENST00000448971 SCGB1C1Q8TD33 95 aa10.61□□□□□ -0.71
USP39-206ENST00000448971 SLC50A1Q9BRV3 221 aa10.61□□□□□ -0.71
USP39-206ENST00000448971 XCL2Q9UBD3 114 aa10.61□□□□□ -0.71
USP39-206ENST00000448971 TRAV5A0A0B4J249 113 aa10.6□□□□□ -0.71
USP39-206ENST00000448971 GIG44P09565 113 aaPredicted RBP10.6□□□□□ -0.71
USP39-206ENST00000448971 HLA-DMBP28068 263 aa10.6□□□□□ -0.71
USP39-206ENST00000448971 PMS2P11Q13670 270 aa10.6□□□□□ -0.71
USP39-206ENST00000448971 GCSAMLQ5JQS6 135 aa10.6□□□□□ -0.71
USP39-206ENST00000448971 ASB13Q8WXK3 278 aa10.6□□□□□ -0.71
USP39-206ENST00000448971 LINC00476Q8WZB0 136 aa10.6□□□□□ -0.71
USP39-206ENST00000448971 MFFQ9GZY8 342 aa10.6□□□□□ -0.71
USP39-206ENST00000448971 DNAH10Q8IVF4 4471 aa10.6□□□□□ -0.71
USP39-206ENST00000448971 SLC17A3O00476 420 aa10.59□□□□□ -0.71
USP39-206ENST00000448971 PSG9Q00887 426 aa10.59□□□□□ -0.71
USP39-206ENST00000448971 HIST1H1AQ02539 215 aaPredicted RBP10.59□□□□□ -0.71
USP39-206ENST00000448971 SLC35B3Q9H1N7 401 aa10.59□□□□□ -0.71
USP39-206ENST00000448971 C11orf68Q9H3H3 251 aaKnown RBP10.59□□□□□ -0.71
USP39-206ENST00000448971 ZNF331Q9NQX6 463 aaPredicted RBP10.59□□□□□ -0.71
USP39-206ENST00000448971 FXYD6-FXYD2A0A087WZ82 144 aa10.58□□□□□ -0.72
USP39-206ENST00000448971 CXorf65A6NEN9 183 aa10.58□□□□□ -0.72
USP39-206ENST00000448971 DEFB4AO15263 64 aa10.58□□□□□ -0.72
USP39-206ENST00000448971 DUSP14O95147 198 aaKnown RBP10.58□□□□□ -0.72
USP39-206ENST00000448971 ZNF705DP0CH99 300 aaPredicted RBP10.58□□□□□ -0.72
USP39-206ENST00000448971 ZNF705BP0CI00 300 aaPredicted RBP10.58□□□□□ -0.72
USP39-206ENST00000448971 IGLC2P0DOY2 106 aa10.58□□□□□ -0.72
USP39-206ENST00000448971 CNN1P51911 297 aaKnown RBP10.58□□□□□ -0.72
USP39-206ENST00000448971 PSG3Q16557 428 aa10.58□□□□□ -0.72
USP39-206ENST00000448971 MRPL32Q9BYC8 188 aaKnown RBP10.58□□□□□ -0.72
USP39-206ENST00000448971 HRH4Q9H3N8 390 aa10.58□□□□□ -0.72
USP39-206ENST00000448971 IGHV3OR16-12A0A075B7B8 117 aa10.57□□□□□ -0.72
USP39-206ENST00000448971 IGHV4-28A0A0C4DH34 117 aa10.57□□□□□ -0.72
USP39-206ENST00000448971 PRB4P10163 310 aaPredicted RBP10.57□□□□□ -0.72
USP39-206ENST00000448971 MIFP14174 115 aa10.57□□□□□ -0.72
USP39-206ENST00000448971 ZNF266Q14584 549 aa10.57□□□□□ -0.72
USP39-206ENST00000448971 GUK1Q16774 197 aa10.57□□□□□ -0.72
USP39-206ENST00000448971 FFAR4Q5NUL3 377 aa10.57□□□□□ -0.72
USP39-206ENST00000448971 OR2T35Q8NGX2 323 aa10.57□□□□□ -0.72
USP39-206ENST00000448971 RPUSD4Q96CM3 377 aaKnown RBP10.57□□□□□ -0.72
USP39-206ENST00000448971 CLUHP3Q96NS8 147 aa10.57□□□□□ -0.72
USP39-206ENST00000448971 AGRNO00468 2067 aa10.57□□□□□ -0.72
USP39-206ENST00000448971 PCLOQ9Y6V0 5065 aa10.56□□□□□ -0.72
USP39-206ENST00000448971 ZNF705EA8MWA4 302 aaPredicted RBP10.56□□□□□ -0.72
USP39-206ENST00000448971 H3BQ15 152 aa10.56□□□□□ -0.72
USP39-206ENST00000448971 PYYP10082 97 aa10.56□□□□□ -0.72
USP39-206ENST00000448971 RHOBP62745 196 aa10.56□□□□□ -0.72
USP39-206ENST00000448971 MIR17HGQ75NE6 70 aa10.56□□□□□ -0.72
USP39-206ENST00000448971 Q8NAQ8 132 aa10.56□□□□□ -0.72
USP39-206ENST00000448971 CSNK1G2-AS1Q8NCQ2 148 aa10.56□□□□□ -0.72
USP39-206ENST00000448971 OR8A1Q8NGG7 326 aa10.56□□□□□ -0.72
USP39-206ENST00000448971 AQP10Q96PS8 301 aa10.56□□□□□ -0.72
USP39-206ENST00000448971 SLC25A2Q9BXI2 301 aa10.56□□□□□ -0.72
USP39-206ENST00000448971 PARD6GQ9BYG4 376 aaPredicted RBP10.56□□□□□ -0.72
USP39-206ENST00000448971 WFDC1Q9HC57 220 aa10.56□□□□□ -0.72
USP39-206ENST00000448971 PPP1R14DQ9NXH3 145 aa10.56□□□□□ -0.72
USP39-206ENST00000448971 TMEM14CQ9P0S9 112 aa10.56□□□□□ -0.72
USP39-206ENST00000448971 FUT9Q9Y231 359 aa10.56□□□□□ -0.72
USP39-206ENST00000448971 X6R8D5 127 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms