RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 RNF2Q99496 336 aa10.17□□□□□ -0.78
PDLIM2-213ENST00000448520 ALMS1Q8TCU4 4167 aa10.16□□□□□ -0.78
PDLIM2-213ENST00000448520 IGKV3-7A0A075B6H7 116 aa10.16□□□□□ -0.78
PDLIM2-213ENST00000448520 SEC11BP0C7V7 166 aa10.16□□□□□ -0.78
PDLIM2-213ENST00000448520 M6PRP20645 277 aa10.16□□□□□ -0.78
PDLIM2-213ENST00000448520 SERF2P84101 59 aa10.16□□□□□ -0.78
PDLIM2-213ENST00000448520 ZNF726P1Q15940 193 aa10.16□□□□□ -0.78
PDLIM2-213ENST00000448520 TMEM41BQ5BJD5 291 aa10.16□□□□□ -0.78
PDLIM2-213ENST00000448520 AKR1C8PQ5T2L2 129 aa10.16□□□□□ -0.78
PDLIM2-213ENST00000448520 C16orf54Q6UWD8 224 aa10.16□□□□□ -0.78
PDLIM2-213ENST00000448520 RPP25LQ8N5L8 163 aaKnown RBP10.16□□□□□ -0.78
PDLIM2-213ENST00000448520 GATAD1Q8WUU5 269 aa10.16□□□□□ -0.78
PDLIM2-213ENST00000448520 GLMPQ8WWB7 406 aa10.16□□□□□ -0.78
PDLIM2-213ENST00000448520 PFDN5Q99471 154 aa10.16□□□□□ -0.78
PDLIM2-213ENST00000448520 ELOA3CA0A087WX78 387 aaPredicted RBP10.15□□□□□ -0.78
PDLIM2-213ENST00000448520 A0A0J9YWU9 116 aa10.15□□□□□ -0.78
PDLIM2-213ENST00000448520 LY6G6CO95867 125 aa10.15□□□□□ -0.78
PDLIM2-213ENST00000448520 CMC4P56277 68 aaPredicted RBP10.15□□□□□ -0.78
PDLIM2-213ENST00000448520 CEMP1Q6PRD7 247 aaPredicted RBP10.15□□□□□ -0.78
PDLIM2-213ENST00000448520 TCF24Q7RTU0 167 aa10.15□□□□□ -0.78
PDLIM2-213ENST00000448520 FAM167A-AS1Q96KT0 104 aa10.15□□□□□ -0.78
PDLIM2-213ENST00000448520 SLC25A2Q9BXI2 301 aa10.15□□□□□ -0.78
PDLIM2-213ENST00000448520 FUT9Q9Y231 359 aa10.15□□□□□ -0.78
PDLIM2-213ENST00000448520 KLK5Q9Y337 293 aaPredicted RBP10.15□□□□□ -0.78
PDLIM2-213ENST00000448520 OR4C46A6NHA9 309 aa10.14□□□□□ -0.79
PDLIM2-213ENST00000448520 H3BTX0 84 aa10.14□□□□□ -0.79
PDLIM2-213ENST00000448520 CDC34P49427 236 aaPredicted RBP10.14□□□□□ -0.79
PDLIM2-213ENST00000448520 PMS2P11Q13670 270 aa10.14□□□□□ -0.79
PDLIM2-213ENST00000448520 OR8I2Q8N0Y5 310 aa10.14□□□□□ -0.79
PDLIM2-213ENST00000448520 GBGT1Q8N5D6 347 aa10.14□□□□□ -0.79
PDLIM2-213ENST00000448520 RNF183Q96D59 192 aa10.14□□□□□ -0.79
PDLIM2-213ENST00000448520 NARS2Q96I59 477 aaKnown RBP10.14□□□□□ -0.79
PDLIM2-213ENST00000448520 A0A1W2PS18 150 aa10.13□□□□□ -0.79
PDLIM2-213ENST00000448520 MRPS12O15235 138 aaKnown RBP10.13□□□□□ -0.79
PDLIM2-213ENST00000448520 PYYP10082 97 aa10.13□□□□□ -0.79
PDLIM2-213ENST00000448520 TFPI2P48307 235 aa10.13□□□□□ -0.79
PDLIM2-213ENST00000448520 RHOBP62745 196 aa10.13□□□□□ -0.79
PDLIM2-213ENST00000448520 FAM90A2PQ658T7 463 aa10.13□□□□□ -0.79
PDLIM2-213ENST00000448520 FAM213BQ8TBF2 198 aa10.13□□□□□ -0.79
PDLIM2-213ENST00000448520 RAB24Q969Q5 203 aa10.13□□□□□ -0.79
PDLIM2-213ENST00000448520 ZNF503Q96F45 646 aa10.13□□□□□ -0.79
PDLIM2-213ENST00000448520 GRAMD2BQ96HH9 432 aa10.13□□□□□ -0.79
PDLIM2-213ENST00000448520 C17orf77Q96MU5 243 aa10.13□□□□□ -0.79
PDLIM2-213ENST00000448520 MRPL32Q9BYC8 188 aaKnown RBP10.13□□□□□ -0.79
PDLIM2-213ENST00000448520 UBQLN2Q9UHD9 624 aa10.13□□□□□ -0.79
PDLIM2-213ENST00000448520 A0A1B0GV50 99 aa10.12□□□□□ -0.79
PDLIM2-213ENST00000448520 A0A1W2PPV4 95 aa10.12□□□□□ -0.79
PDLIM2-213ENST00000448520 MBP02144 154 aa10.12□□□□□ -0.79
PDLIM2-213ENST00000448520 SULT1A2P50226 295 aa10.12□□□□□ -0.79
PDLIM2-213ENST00000448520 FGF8P55075 233 aaPredicted RBP10.12□□□□□ -0.79
PDLIM2-213ENST00000448520 RPL11P62913 178 aaKnown RBP10.12□□□□□ -0.79
PDLIM2-213ENST00000448520 DEFB135Q30KP9 77 aa10.12□□□□□ -0.79
PDLIM2-213ENST00000448520 LCN15Q6UWW0 184 aa10.12□□□□□ -0.79
PDLIM2-213ENST00000448520 SIGLEC15Q6ZMC9 328 aa10.12□□□□□ -0.79
PDLIM2-213ENST00000448520 PCNPQ8WW12 178 aaKnown RBP10.12□□□□□ -0.79
PDLIM2-213ENST00000448520 ACTR3CQ9C0K3 210 aaPredicted RBP10.12□□□□□ -0.79
PDLIM2-213ENST00000448520 TMEM231Q9H6L2 316 aa10.12□□□□□ -0.79
PDLIM2-213ENST00000448520 H3BQ15 152 aa10.11□□□□□ -0.79
PDLIM2-213ENST00000448520 OR10J4P0C629 311 aa10.11□□□□□ -0.79
PDLIM2-213ENST00000448520 PRB4P10163 310 aaPredicted RBP10.11□□□□□ -0.79
PDLIM2-213ENST00000448520 IFITM2Q01629 132 aa10.11□□□□□ -0.79
PDLIM2-213ENST00000448520 ODF3L2Q3SX64 289 aa10.11□□□□□ -0.79
PDLIM2-213ENST00000448520 C1orf194Q5T5A4 169 aa10.11□□□□□ -0.79
PDLIM2-213ENST00000448520 EIF5AL1Q6IS14 154 aaKnown RBP10.11□□□□□ -0.79
PDLIM2-213ENST00000448520 STXBP6Q8NFX7 210 aa10.11□□□□□ -0.79
PDLIM2-213ENST00000448520 MAP6D1Q9H9H5 199 aa10.11□□□□□ -0.79
PDLIM2-213ENST00000448520 CTXND1A0A1B0GTU2 59 aa10.1□□□□□ -0.79
PDLIM2-213ENST00000448520 MAP1LC3B2A6NCE7 125 aa10.1□□□□□ -0.79
PDLIM2-213ENST00000448520 UMAD1C9J7I0 102 aa10.1□□□□□ -0.79
PDLIM2-213ENST00000448520 OR7C2O60412 319 aa10.1□□□□□ -0.79
PDLIM2-213ENST00000448520 ARL14EPLP0DKL9 152 aa10.1□□□□□ -0.79
PDLIM2-213ENST00000448520 IGFL4Q6B9Z1 124 aa10.1□□□□□ -0.79
PDLIM2-213ENST00000448520 TEX261Q6UWH6 196 aa10.1□□□□□ -0.79
PDLIM2-213ENST00000448520 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.1□□□□□ -0.79
PDLIM2-213ENST00000448520 FAM24BQ8N5W8 94 aa10.1□□□□□ -0.79
PDLIM2-213ENST00000448520 PHYHIPLQ96FC7 376 aa10.1□□□□□ -0.79
PDLIM2-213ENST00000448520 MAP1LC3BQ9GZQ8 125 aa10.1□□□□□ -0.79
PDLIM2-213ENST00000448520 ZNF586Q9NXT0 402 aa10.1□□□□□ -0.79
PDLIM2-213ENST00000448520 PFDN2Q9UHV9 154 aa10.1□□□□□ -0.79
PDLIM2-213ENST00000448520 KMT2AQ03164 3969 aa10.1□□□□□ -0.79
PDLIM2-213ENST00000448520 SLC17A3O00476 420 aa10.09□□□□□ -0.79
PDLIM2-213ENST00000448520 CD5P06127 495 aa10.09□□□□□ -0.79
PDLIM2-213ENST00000448520 STAG3L2P0CL84 134 aa10.09□□□□□ -0.79
PDLIM2-213ENST00000448520 STAG3L3P0CL85 134 aa10.09□□□□□ -0.79
PDLIM2-213ENST00000448520 IGLC2P0DOY2 106 aa10.09□□□□□ -0.79
PDLIM2-213ENST00000448520 RPL35AP18077 110 aaKnown RBP10.09□□□□□ -0.79
PDLIM2-213ENST00000448520 RPL7P18124 248 aaKnown RBP10.09□□□□□ -0.79
PDLIM2-213ENST00000448520 GALR1P47211 349 aa10.09□□□□□ -0.79
PDLIM2-213ENST00000448520 KHDC3LQ587J8 217 aa10.09□□□□□ -0.79
PDLIM2-213ENST00000448520 BPIFA4PQ86YQ2 179 aa10.09□□□□□ -0.79
PDLIM2-213ENST00000448520 ZNF680Q8NEM1 530 aa10.09□□□□□ -0.79
PDLIM2-213ENST00000448520 BLNKQ8WV28 456 aa10.09□□□□□ -0.79
PDLIM2-213ENST00000448520 FXYD5Q96DB9 178 aa10.09□□□□□ -0.79
PDLIM2-213ENST00000448520 PAXXQ9BUH6 204 aa10.09□□□□□ -0.79
PDLIM2-213ENST00000448520 CSTL1Q9H114 145 aa10.09□□□□□ -0.79
PDLIM2-213ENST00000448520 MS4A6AQ9H2W1 248 aa10.09□□□□□ -0.79
PDLIM2-213ENST00000448520 OR51M1Q9H341 326 aa10.09□□□□□ -0.79
PDLIM2-213ENST00000448520 TMPRSS5Q9H3S3 457 aa10.09□□□□□ -0.79
PDLIM2-213ENST00000448520 HELTA6NFD8 242 aa10.08□□□□□ -0.8
PDLIM2-213ENST00000448520 ZNF705EA8MWA4 302 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms