RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 LRRC20Q8TCA0 184 aa19.91■□□□□ 0.78
CBX4-202ENST00000448310 LINC01587Q99440 93 aa19.91■□□□□ 0.78
CBX4-202ENST00000448310 TSPOP30536 169 aa19.9■□□□□ 0.78
CBX4-202ENST00000448310 C4orf46Q504U0 113 aa19.9■□□□□ 0.78
CBX4-202ENST00000448310 ARV1Q9H2C2 271 aa19.9■□□□□ 0.78
CBX4-202ENST00000448310 NPVFQ9HCQ7 196 aa19.9■□□□□ 0.78
CBX4-202ENST00000448310 PPP1R14DQ9NXH3 145 aa19.9■□□□□ 0.78
CBX4-202ENST00000448310 F5H768 121 aa19.89■□□□□ 0.77
CBX4-202ENST00000448310 SNRPCP09234 159 aaKnown RBP19.89■□□□□ 0.77
CBX4-202ENST00000448310 IAH1Q2TAA2 248 aaPredicted RBP19.89■□□□□ 0.77
CBX4-202ENST00000448310 SOHLH1Q5JUK2 328 aa19.89■□□□□ 0.77
CBX4-202ENST00000448310 C1orf134Q5TEV5 83 aa19.89■□□□□ 0.77
CBX4-202ENST00000448310 MGAT4CQ9UBM8 478 aa19.89■□□□□ 0.77
CBX4-202ENST00000448310 MRPS12O15235 138 aaKnown RBP19.88■□□□□ 0.77
CBX4-202ENST00000448310 HTN1P15515 57 aa19.88■□□□□ 0.77
CBX4-202ENST00000448310 BTCP35070 178 aa19.88■□□□□ 0.77
CBX4-202ENST00000448310 TEPPQ6URK8 271 aa19.88■□□□□ 0.77
CBX4-202ENST00000448310 OR10P1Q8NGE3 313 aa19.88■□□□□ 0.77
CBX4-202ENST00000448310 ATG101Q9BSB4 218 aa19.88■□□□□ 0.77
CBX4-202ENST00000448310 ARL16Q0P5N6 197 aa19.87■□□□□ 0.77
CBX4-202ENST00000448310 ZNF575Q86XF7 245 aa19.87■□□□□ 0.77
CBX4-202ENST00000448310 RPUSD4Q96CM3 377 aaKnown RBP19.87■□□□□ 0.77
CBX4-202ENST00000448310 SDHCQ99643 169 aaPredicted RBP19.87■□□□□ 0.77
CBX4-202ENST00000448310 GSKIPQ9P0R6 139 aa19.87■□□□□ 0.77
CBX4-202ENST00000448310 RCL1Q9Y2P8 373 aaKnown RBP19.87■□□□□ 0.77
CBX4-202ENST00000448310 FNDC10F2Z333 226 aa19.86■□□□□ 0.77
CBX4-202ENST00000448310 K7EPK0 472 aa19.86■□□□□ 0.77
CBX4-202ENST00000448310 ZBTB8BQ8NAP8 495 aaPredicted RBP19.86■□□□□ 0.77
CBX4-202ENST00000448310 TSC22D2O75157 780 aa19.85■□□□□ 0.77
CBX4-202ENST00000448310 NUDT3O95989 172 aa19.85■□□□□ 0.77
CBX4-202ENST00000448310 TAS2R60P59551 318 aa19.85■□□□□ 0.77
CBX4-202ENST00000448310 S100A7AQ86SG5 101 aa19.85■□□□□ 0.77
CBX4-202ENST00000448310 TMEM256Q8N2U0 113 aa19.85■□□□□ 0.77
CBX4-202ENST00000448310 GOSR2O14653 212 aa19.84■□□□□ 0.77
CBX4-202ENST00000448310 LINC00305Q7Z4B0 112 aa19.84■□□□□ 0.77
CBX4-202ENST00000448310 H3BTX0 84 aa19.83■□□□□ 0.77
CBX4-202ENST00000448310 AGPAT2O15120 278 aa19.83■□□□□ 0.77
CBX4-202ENST00000448310 ATP5G1P05496 136 aa19.83■□□□□ 0.77
CBX4-202ENST00000448310 ATP5G3P48201 142 aa19.83■□□□□ 0.77
CBX4-202ENST00000448310 FAM3BP58499 235 aaPredicted RBP19.83■□□□□ 0.77
CBX4-202ENST00000448310 TAS2R30P59541 319 aa19.83■□□□□ 0.77
CBX4-202ENST00000448310 ZNF546Q86UE3 836 aa19.83■□□□□ 0.77
CBX4-202ENST00000448310 PARD6GQ9BYG4 376 aaPredicted RBP19.83■□□□□ 0.77
CBX4-202ENST00000448310 ZNF331Q9NQX6 463 aaPredicted RBP19.83■□□□□ 0.77
CBX4-202ENST00000448310 ABCA13Q86UQ4 5058 aa19.82■□□□□ 0.76
CBX4-202ENST00000448310 CDKN1BP46527 198 aa19.82■□□□□ 0.76
CBX4-202ENST00000448310 KIR3DS1Q14943 382 aa19.82■□□□□ 0.76
CBX4-202ENST00000448310 C16orf74Q96GX8 76 aa19.82■□□□□ 0.76
CBX4-202ENST00000448310 C7orf66A4D0T2 115 aa19.81■□□□□ 0.76
CBX4-202ENST00000448310 CBY3A6NI87 242 aa19.81■□□□□ 0.76
CBX4-202ENST00000448310 CENPXA8MT69 81 aa19.81■□□□□ 0.76
CBX4-202ENST00000448310 MBPP02686 304 aaPredicted RBP19.81■□□□□ 0.76
CBX4-202ENST00000448310 PXDC1Q5TGL8 231 aa19.81■□□□□ 0.76
CBX4-202ENST00000448310 MORN5Q5VZ52 161 aa19.81■□□□□ 0.76
CBX4-202ENST00000448310 LCN15Q6UWW0 184 aa19.81■□□□□ 0.76
CBX4-202ENST00000448310 ZNRF2Q8NHG8 242 aa19.81■□□□□ 0.76
CBX4-202ENST00000448310 MITD1Q8WV92 249 aa19.81■□□□□ 0.76
CBX4-202ENST00000448310 MGST2Q99735 147 aa19.81■□□□□ 0.76
CBX4-202ENST00000448310 PRAC2D3DTV9 90 aa19.8■□□□□ 0.76
CBX4-202ENST00000448310 SLC17A3O00476 420 aa19.8■□□□□ 0.76
CBX4-202ENST00000448310 CCSO14618 274 aa19.8■□□□□ 0.76
CBX4-202ENST00000448310 CXCL2P19875 107 aa19.8■□□□□ 0.76
CBX4-202ENST00000448310 TMEM37Q8WXS4 190 aa19.8■□□□□ 0.76
CBX4-202ENST00000448310 SLC50A1Q9BRV3 221 aa19.8■□□□□ 0.76
CBX4-202ENST00000448310 NOP10Q9NPE3 64 aaKnown RBP19.8■□□□□ 0.76
CBX4-202ENST00000448310 RNF24Q9Y225 148 aa19.8■□□□□ 0.76
CBX4-202ENST00000448310 TIMM8BQ9Y5J9 83 aaPredicted RBP19.8■□□□□ 0.76
CBX4-202ENST00000448310 ZNF701M0R085 212 aaPredicted RBP19.79■□□□□ 0.76
CBX4-202ENST00000448310 COX7A2P2O60397 106 aa19.79■□□□□ 0.76
CBX4-202ENST00000448310 RNASE8Q8TDE3 154 aaKnown RBP19.79■□□□□ 0.76
CBX4-202ENST00000448310 RNF141Q8WVD5 230 aa19.79■□□□□ 0.76
CBX4-202ENST00000448310 NBDYA0A0U1RRE5 68 aa19.78■□□□□ 0.76
CBX4-202ENST00000448310 IL7P13232 177 aa19.78■□□□□ 0.76
CBX4-202ENST00000448310 TNP2Q05952 138 aa19.78■□□□□ 0.76
CBX4-202ENST00000448310 BPIFA4PQ86YQ2 179 aa19.78■□□□□ 0.76
CBX4-202ENST00000448310 GGACTQ9BVM4 153 aa19.78■□□□□ 0.76
CBX4-202ENST00000448310 OPCMLQ14982 345 aa19.77■□□□□ 0.76
CBX4-202ENST00000448310 TMEM263Q8WUH6 116 aaKnown RBP19.77■□□□□ 0.76
CBX4-202ENST00000448310 LINC00588Q9Y4M8 146 aa19.77■□□□□ 0.76
CBX4-202ENST00000448310 H7BYZ3 331 aa19.76■□□□□ 0.75
CBX4-202ENST00000448310 ZNF493Q6ZR52 646 aa19.76■□□□□ 0.75
CBX4-202ENST00000448310 C20orf85Q9H1P6 137 aa19.76■□□□□ 0.75
CBX4-202ENST00000448310 LSM5Q9Y4Y9 91 aaKnown RBP19.76■□□□□ 0.75
CBX4-202ENST00000448310 L7N2F9 121 aa19.75■□□□□ 0.75
CBX4-202ENST00000448310 CCL18P55774 89 aa19.75■□□□□ 0.75
CBX4-202ENST00000448310 VAMP2P63027 116 aa19.75■□□□□ 0.75
CBX4-202ENST00000448310 GFI1BQ5VTD9 330 aa19.75■□□□□ 0.75
CBX4-202ENST00000448310 C10orf113Q5VZT2 155 aa19.75■□□□□ 0.75
CBX4-202ENST00000448310 H3BQ15 152 aa19.74■□□□□ 0.75
CBX4-202ENST00000448310 J3KRW8 73 aa19.74■□□□□ 0.75
CBX4-202ENST00000448310 IGLC2P0DOY2 106 aa19.74■□□□□ 0.75
CBX4-202ENST00000448310 OR10J6PQ8NGY7 276 aa19.74■□□□□ 0.75
CBX4-202ENST00000448310 HSPG2P98160 4391 aa19.74■□□□□ 0.75
CBX4-202ENST00000448310 TRAV5A0A0B4J249 113 aa19.73■□□□□ 0.75
CBX4-202ENST00000448310 FAM25EA8MYX2 175 aa19.73■□□□□ 0.75
CBX4-202ENST00000448310 CAMLGP49069 296 aa19.73■□□□□ 0.75
CBX4-202ENST00000448310 BCAP31P51572 246 aa19.73■□□□□ 0.75
CBX4-202ENST00000448310 ZNF846Q147U1 533 aa19.73■□□□□ 0.75
CBX4-202ENST00000448310 MIC13Q5XKP0 118 aa19.73■□□□□ 0.75
CBX4-202ENST00000448310 C6orf223Q8N319 242 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms