RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 IFITM5A6NNB3 132 aa3.95□□□□□ -1.78
USP49-205ENST00000448078 ZNF705GA8MUZ8 300 aaPredicted RBP3.95□□□□□ -1.78
USP49-205ENST00000448078 SNURFLB1AK76 121 aa3.95□□□□□ -1.78
USP49-205ENST00000448078 C1QBP02746 253 aa3.95□□□□□ -1.78
USP49-205ENST00000448078 RLN1P04808 185 aa3.95□□□□□ -1.78
USP49-205ENST00000448078 IL4P05112 153 aa3.95□□□□□ -1.78
USP49-205ENST00000448078 RAB3BP20337 219 aa3.95□□□□□ -1.78
USP49-205ENST00000448078 OR10J1P30954 320 aa3.95□□□□□ -1.78
USP49-205ENST00000448078 TAS2R60P59551 318 aa3.95□□□□□ -1.78
USP49-205ENST00000448078 DHODHQ02127 395 aa3.95□□□□□ -1.78
USP49-205ENST00000448078 TIGITQ495A1 244 aa3.95□□□□□ -1.78
USP49-205ENST00000448078 C1orf194Q5T5A4 169 aa3.95□□□□□ -1.78
USP49-205ENST00000448078 ZNF818PQ6ZRF7 136 aa3.95□□□□□ -1.78
USP49-205ENST00000448078 OR8I2Q8N0Y5 310 aa3.95□□□□□ -1.78
USP49-205ENST00000448078 C1orf158Q8N1D5 194 aa3.95□□□□□ -1.78
USP49-205ENST00000448078 SLC35B3Q9H1N7 401 aa3.95□□□□□ -1.78
USP49-205ENST00000448078 DOK5Q9P104 306 aa3.95□□□□□ -1.78
USP49-205ENST00000448078 CACFD1Q9UGQ2 172 aa3.95□□□□□ -1.78
USP49-205ENST00000448078 NACAE9PAV3 2078 aa3.94□□□□□ -1.78
USP49-205ENST00000448078 A0A0J9YY99 117 aa3.94□□□□□ -1.78
USP49-205ENST00000448078 TMEM235A6NFC5 223 aa3.94□□□□□ -1.78
USP49-205ENST00000448078 ZNF98A6NK75 572 aa3.94□□□□□ -1.78
USP49-205ENST00000448078 KRTAP16-1A8MUX0 517 aa3.94□□□□□ -1.78
USP49-205ENST00000448078 GPR31O00270 319 aa3.94□□□□□ -1.78
USP49-205ENST00000448078 RLN2P04090 185 aa3.94□□□□□ -1.78
USP49-205ENST00000448078 P0C879 139 aa3.94□□□□□ -1.78
USP49-205ENST00000448078 HTR2BP41595 481 aa3.94□□□□□ -1.78
USP49-205ENST00000448078 GALR1P47211 349 aa3.94□□□□□ -1.78
USP49-205ENST00000448078 TSPAN5P62079 268 aa3.94□□□□□ -1.78
USP49-205ENST00000448078 RHOBP62745 196 aa3.94□□□□□ -1.78
USP49-205ENST00000448078 SLAQ13239 276 aa3.94□□□□□ -1.78
USP49-205ENST00000448078 ZNF79Q15937 498 aa3.94□□□□□ -1.78
USP49-205ENST00000448078 DHRS11Q6UWP2 260 aa3.94□□□□□ -1.78
USP49-205ENST00000448078 RBPMSQ93062 196 aaKnown RBP3.94□□□□□ -1.78
USP49-205ENST00000448078 NOP10Q9NPE3 64 aaKnown RBP3.94□□□□□ -1.78
USP49-205ENST00000448078 IFT46Q9NQC8 304 aa3.94□□□□□ -1.78
USP49-205ENST00000448078 LY96Q9Y6Y9 160 aa3.94□□□□□ -1.78
USP49-205ENST00000448078 MYCBP2O75592 4640 aa3.94□□□□□ -1.78
USP49-205ENST00000448078 TRAV18A0A075B6X5 111 aa3.93□□□□□ -1.78
USP49-205ENST00000448078 TRAV5A0A0B4J249 113 aa3.93□□□□□ -1.78
USP49-205ENST00000448078 A0A0J9YX75 114 aa3.93□□□□□ -1.78
USP49-205ENST00000448078 SNRPGP15A8MWD9 76 aa3.93□□□□□ -1.78
USP49-205ENST00000448078 INS-IGF2F8WCM5 200 aa3.93□□□□□ -1.78
USP49-205ENST00000448078 UCP1P25874 307 aa3.93□□□□□ -1.78
USP49-205ENST00000448078 DSCR10P59022 87 aa3.93□□□□□ -1.78
USP49-205ENST00000448078 TAS2R46P59540 309 aa3.93□□□□□ -1.78
USP49-205ENST00000448078 ACOT6Q3I5F7 207 aaPredicted RBP3.93□□□□□ -1.78
USP49-205ENST00000448078 TDRG1Q3Y452 100 aa3.93□□□□□ -1.78
USP49-205ENST00000448078 OR8G2PQ6IF36 304 aa3.93□□□□□ -1.78
USP49-205ENST00000448078 STEAP1BQ6NZ63 245 aa3.93□□□□□ -1.78
USP49-205ENST00000448078 TMEM91Q6ZNR0 172 aa3.93□□□□□ -1.78
USP49-205ENST00000448078 S100A7AQ86SG5 101 aa3.93□□□□□ -1.78
USP49-205ENST00000448078 C10orf126Q8N4M7 172 aa3.93□□□□□ -1.78
USP49-205ENST00000448078 ZNF709Q8N972 641 aa3.93□□□□□ -1.78
USP49-205ENST00000448078 OR51G1Q8NGK1 321 aa3.93□□□□□ -1.78
USP49-205ENST00000448078 RNASE11Q8TAA1 199 aaKnown RBP3.93□□□□□ -1.78
USP49-205ENST00000448078 RNASEH2CQ8TDP1 164 aaKnown RBP3.93□□□□□ -1.78
USP49-205ENST00000448078 ZNF2Q9BSG1 426 aaPredicted RBP3.93□□□□□ -1.78
USP49-205ENST00000448078 PBDC1Q9BVG4 233 aa3.93□□□□□ -1.78
USP49-205ENST00000448078 RPS10P5Q9NQ39 176 aa3.93□□□□□ -1.78
USP49-205ENST00000448078 EHFQ9NZC4 300 aa3.93□□□□□ -1.78
USP49-205ENST00000448078 WDR83OSQ9Y284 106 aa3.93□□□□□ -1.78
USP49-205ENST00000448078 TPRKBQ9Y3C4 175 aa3.93□□□□□ -1.78
USP49-205ENST00000448078 TRGV2A0A075B6R0 118 aa3.92□□□□□ -1.78
USP49-205ENST00000448078 A0A0A6YYH2 397 aa3.92□□□□□ -1.78
USP49-205ENST00000448078 A6NJ64 397 aa3.92□□□□□ -1.78
USP49-205ENST00000448078 GABARAPH6UMI1 98 aa3.92□□□□□ -1.78
USP49-205ENST00000448078 H7BYZ3 331 aa3.92□□□□□ -1.78
USP49-205ENST00000448078 ZNF701M0R085 212 aaPredicted RBP3.92□□□□□ -1.78
USP49-205ENST00000448078 RS1O15537 224 aa3.92□□□□□ -1.78
USP49-205ENST00000448078 NXPH4O95158 308 aa3.92□□□□□ -1.78
USP49-205ENST00000448078 GABARAPO95166 117 aa3.92□□□□□ -1.78
USP49-205ENST00000448078 CFDP00746 253 aaPredicted RBP3.92□□□□□ -1.78
USP49-205ENST00000448078 IGKV1-17P01599 117 aa3.92□□□□□ -1.78
USP49-205ENST00000448078 FUSP35637 526 aaKnown RBP eCLIP3.92□□□□□ -1.78
USP49-205ENST00000448078 RND2P52198 227 aa3.92□□□□□ -1.78
USP49-205ENST00000448078 AKR1C2P52895 323 aa3.92□□□□□ -1.78
USP49-205ENST00000448078 TAS2R20P59543 309 aa3.92□□□□□ -1.78
USP49-205ENST00000448078 SUPT4H1P63272 117 aaKnown RBP3.92□□□□□ -1.78
USP49-205ENST00000448078 MLLT11Q13015 90 aaPredicted RBP3.92□□□□□ -1.78
USP49-205ENST00000448078 GDF5OSQ5U4N7 250 aa3.92□□□□□ -1.78
USP49-205ENST00000448078 PRR27Q6MZM9 219 aa3.92□□□□□ -1.78
USP49-205ENST00000448078 CFAP161Q6P656 301 aa3.92□□□□□ -1.78
USP49-205ENST00000448078 Q6ZRP5 223 aa3.92□□□□□ -1.78
USP49-205ENST00000448078 PACRGLQ8N7B6 248 aa3.92□□□□□ -1.78
USP49-205ENST00000448078 OR5H2Q8NGV7 314 aa3.92□□□□□ -1.78
USP49-205ENST00000448078 LRRC20Q8TCA0 184 aa3.92□□□□□ -1.78
USP49-205ENST00000448078 VCXQ9H320 206 aa3.92□□□□□ -1.78
USP49-205ENST00000448078 DPH3P1Q9H4G8 78 aa3.92□□□□□ -1.78
USP49-205ENST00000448078 ELF5Q9UKW6 265 aaPredicted RBP3.92□□□□□ -1.78
USP49-205ENST00000448078 ZFP92A6NM28 416 aa3.91□□□□□ -1.78
USP49-205ENST00000448078 RNASE2P10153 161 aaKnown RBP3.91□□□□□ -1.78
USP49-205ENST00000448078 SPCS3P61009 180 aa3.91□□□□□ -1.78
USP49-205ENST00000448078 FABP5Q01469 135 aa3.91□□□□□ -1.78
USP49-205ENST00000448078 OPCMLQ14982 345 aa3.91□□□□□ -1.78
USP49-205ENST00000448078 MRPL23Q16540 153 aaKnown RBP3.91□□□□□ -1.78
USP49-205ENST00000448078 SPINK13Q1W4C9 94 aa3.91□□□□□ -1.78
USP49-205ENST00000448078 VWC2Q2TAL6 325 aa3.91□□□□□ -1.78
USP49-205ENST00000448078 Q6ZRN7 208 aaPredicted RBP3.91□□□□□ -1.78
USP49-205ENST00000448078 TMED4Q7Z7H5 227 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms