RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 EBLN2Q6P2I7 272 aa10.18□□□□□ -0.78
TREX1-202ENST00000444177 PATE2Q6UY27 113 aa10.18□□□□□ -0.78
TREX1-202ENST00000444177 Q6ZRG5 221 aa10.18□□□□□ -0.78
TREX1-202ENST00000444177 LINC00305Q7Z4B0 112 aa10.18□□□□□ -0.78
TREX1-202ENST00000444177 OR4B1Q8NGF8 309 aa10.18□□□□□ -0.78
TREX1-202ENST00000444177 C20orf173Q96LM9 149 aa10.18□□□□□ -0.78
TREX1-202ENST00000444177 NPCDR1Q9BY65 106 aa10.18□□□□□ -0.78
TREX1-202ENST00000444177 C11orf68Q9H3H3 251 aaKnown RBP10.18□□□□□ -0.78
TREX1-202ENST00000444177 RPRMQ9NS64 109 aa10.18□□□□□ -0.78
TREX1-202ENST00000444177 FXYD6-FXYD2A0A087WZ82 144 aa10.17□□□□□ -0.78
TREX1-202ENST00000444177 RNF222A6NCQ9 220 aa10.17□□□□□ -0.78
TREX1-202ENST00000444177 C17orf112F2Z3M2 114 aa10.17□□□□□ -0.78
TREX1-202ENST00000444177 IFNA5P01569 189 aa10.17□□□□□ -0.78
TREX1-202ENST00000444177 FXYD7P58549 80 aa10.17□□□□□ -0.78
TREX1-202ENST00000444177 NANOS2P60321 138 aaKnown RBP10.17□□□□□ -0.78
TREX1-202ENST00000444177 B2MP61769 119 aa10.17□□□□□ -0.78
TREX1-202ENST00000444177 IGFL4Q6B9Z1 124 aa10.17□□□□□ -0.78
TREX1-202ENST00000444177 OR1L4Q8NGR5 311 aa10.17□□□□□ -0.78
TREX1-202ENST00000444177 C11orf45Q8TAV5 145 aa10.17□□□□□ -0.78
TREX1-202ENST00000444177 C17orf77Q96MU5 243 aa10.17□□□□□ -0.78
TREX1-202ENST00000444177 PFDN5Q99471 154 aa10.17□□□□□ -0.78
TREX1-202ENST00000444177 C1QTNF4Q9BXJ3 329 aa10.17□□□□□ -0.78
TREX1-202ENST00000444177 XCL2Q9UBD3 114 aa10.17□□□□□ -0.78
TREX1-202ENST00000444177 HMSDA8MTL9 139 aa10.16□□□□□ -0.78
TREX1-202ENST00000444177 MIC13Q5XKP0 118 aa10.16□□□□□ -0.78
TREX1-202ENST00000444177 TCTE3Q8IZS6 198 aa10.16□□□□□ -0.78
TREX1-202ENST00000444177 RNF182Q8N6D2 247 aa10.16□□□□□ -0.78
TREX1-202ENST00000444177 ZNF709Q8N972 641 aa10.16□□□□□ -0.78
TREX1-202ENST00000444177 Q8NAQ8 132 aa10.16□□□□□ -0.78
TREX1-202ENST00000444177 SCGB1C1Q8TD33 95 aa10.16□□□□□ -0.78
TREX1-202ENST00000444177 SLC39A9Q9NUM3 307 aa10.16□□□□□ -0.78
TREX1-202ENST00000444177 PXMP4Q9Y6I8 212 aa10.16□□□□□ -0.78
TREX1-202ENST00000444177 A0A087X0K7 114 aa10.15□□□□□ -0.78
TREX1-202ENST00000444177 TRAV8-2A0A0B4J237 113 aa10.15□□□□□ -0.78
TREX1-202ENST00000444177 IGHV4-28A0A0C4DH34 117 aa10.15□□□□□ -0.78
TREX1-202ENST00000444177 A0A0J9YX75 114 aa10.15□□□□□ -0.78
TREX1-202ENST00000444177 ZNF705EA8MWA4 302 aaPredicted RBP10.15□□□□□ -0.78
TREX1-202ENST00000444177 TAAR5O14804 337 aa10.15□□□□□ -0.78
TREX1-202ENST00000444177 MIFP14174 115 aa10.15□□□□□ -0.78
TREX1-202ENST00000444177 ZNF345Q14585 488 aa10.15□□□□□ -0.78
TREX1-202ENST00000444177 FAM78BQ5VT40 261 aa10.15□□□□□ -0.78
TREX1-202ENST00000444177 C10orf113Q5VZT2 155 aa10.15□□□□□ -0.78
TREX1-202ENST00000444177 SPATA31B1PQ5VZV4 182 aa10.15□□□□□ -0.78
TREX1-202ENST00000444177 CSNK1G2-AS1Q8NCQ2 148 aa10.15□□□□□ -0.78
TREX1-202ENST00000444177 ZNF738Q8NE65 137 aa10.15□□□□□ -0.78
TREX1-202ENST00000444177 LRRC20Q8TCA0 184 aa10.15□□□□□ -0.78
TREX1-202ENST00000444177 TMEM37Q8WXS4 190 aa10.15□□□□□ -0.78
TREX1-202ENST00000444177 ST6GAL2Q96JF0 529 aa10.15□□□□□ -0.78
TREX1-202ENST00000444177 SMIM3Q9BZL3 60 aa10.15□□□□□ -0.78
TREX1-202ENST00000444177 MFFQ9GZY8 342 aa10.15□□□□□ -0.78
TREX1-202ENST00000444177 WFDC1Q9HC57 220 aa10.15□□□□□ -0.78
TREX1-202ENST00000444177 DNAJC4Q9NNZ3 241 aa10.15□□□□□ -0.78
TREX1-202ENST00000444177 TIMM9Q9Y5J7 89 aa10.15□□□□□ -0.78
TREX1-202ENST00000444177 X6R8D5 127 aa10.15□□□□□ -0.78
TREX1-202ENST00000444177 SLC35B3Q9H1N7 401 aa10.14□□□□□ -0.79
TREX1-202ENST00000444177 KMT2AQ03164 3969 aa10.14□□□□□ -0.79
TREX1-202ENST00000444177 MRPS12O15235 138 aaKnown RBP10.13□□□□□ -0.79
TREX1-202ENST00000444177 ARPC5O15511 151 aa10.13□□□□□ -0.79
TREX1-202ENST00000444177 SNRPCP09234 159 aaKnown RBP10.13□□□□□ -0.79
TREX1-202ENST00000444177 HLA-DMBP28068 263 aa10.13□□□□□ -0.79
TREX1-202ENST00000444177 PSG9Q00887 426 aa10.13□□□□□ -0.79
TREX1-202ENST00000444177 MORN5Q5VZ52 161 aa10.13□□□□□ -0.79
TREX1-202ENST00000444177 BPIFA4PQ86YQ2 179 aa10.13□□□□□ -0.79
TREX1-202ENST00000444177 IGHV3OR16-12A0A075B7B8 117 aa10.12□□□□□ -0.79
TREX1-202ENST00000444177 BORCS7-ASMTA0A0B4J1R7 106 aa10.12□□□□□ -0.79
TREX1-202ENST00000444177 SMLR1H3BR10 107 aa10.12□□□□□ -0.79
TREX1-202ENST00000444177 RBMY1A1P0DJD3 496 aaKnown RBP10.12□□□□□ -0.79
TREX1-202ENST00000444177 RBMY1CP0DJD4 496 aa10.12□□□□□ -0.79
TREX1-202ENST00000444177 CXCL2P19875 107 aa10.12□□□□□ -0.79
TREX1-202ENST00000444177 CNN1P51911 297 aaKnown RBP10.12□□□□□ -0.79
TREX1-202ENST00000444177 RBMY1FQ15415 496 aaKnown RBP10.12□□□□□ -0.79
TREX1-202ENST00000444177 LGALS9CQ6DKI2 356 aa10.12□□□□□ -0.79
TREX1-202ENST00000444177 LCN15Q6UWW0 184 aa10.12□□□□□ -0.79
TREX1-202ENST00000444177 AKAP14Q86UN6 197 aa10.12□□□□□ -0.79
TREX1-202ENST00000444177 RPP25LQ8N5L8 163 aaKnown RBP10.12□□□□□ -0.79
TREX1-202ENST00000444177 CLUHP3Q96NS8 147 aa10.12□□□□□ -0.79
TREX1-202ENST00000444177 PSMG3Q9BT73 122 aaPredicted RBP10.12□□□□□ -0.79
TREX1-202ENST00000444177 TRAV5A0A0B4J249 113 aa10.11□□□□□ -0.79
TREX1-202ENST00000444177 A0A0D9SG52 128 aa10.11□□□□□ -0.79
TREX1-202ENST00000444177 H3BTX0 84 aa10.11□□□□□ -0.79
TREX1-202ENST00000444177 DUSP14O95147 198 aaKnown RBP10.11□□□□□ -0.79
TREX1-202ENST00000444177 ZNF705DP0CH99 300 aaPredicted RBP10.11□□□□□ -0.79
TREX1-202ENST00000444177 ZNF705BP0CI00 300 aaPredicted RBP10.11□□□□□ -0.79
TREX1-202ENST00000444177 PRB4P10163 310 aaPredicted RBP10.11□□□□□ -0.79
TREX1-202ENST00000444177 HIST1H1AQ02539 215 aaPredicted RBP10.11□□□□□ -0.79
TREX1-202ENST00000444177 KCNRGQ8N5I3 272 aa10.11□□□□□ -0.79
TREX1-202ENST00000444177 OR11H4Q8NGC9 324 aa10.11□□□□□ -0.79
TREX1-202ENST00000444177 OR2G3Q8NGZ4 309 aa10.11□□□□□ -0.79
TREX1-202ENST00000444177 SLC50A1Q9BRV3 221 aa10.11□□□□□ -0.79
TREX1-202ENST00000444177 MRPL32Q9BYC8 188 aaKnown RBP10.11□□□□□ -0.79
TREX1-202ENST00000444177 hCG_2014768A0A024R1R8 64 aa10.1□□□□□ -0.79
TREX1-202ENST00000444177 C1QBP02746 253 aa10.1□□□□□ -0.79
TREX1-202ENST00000444177 IGLC2P0DOY2 106 aa10.1□□□□□ -0.79
TREX1-202ENST00000444177 SERF2P84101 59 aa10.1□□□□□ -0.79
TREX1-202ENST00000444177 PSG3Q16557 428 aa10.1□□□□□ -0.79
TREX1-202ENST00000444177 ZNF705AQ6ZN79 300 aaPredicted RBP10.1□□□□□ -0.79
TREX1-202ENST00000444177 C2CD4CQ8TF44 421 aa10.1□□□□□ -0.79
TREX1-202ENST00000444177 GNPNAT1Q96EK6 184 aaPredicted RBP10.1□□□□□ -0.79
TREX1-202ENST00000444177 HRH4Q9H3N8 390 aa10.1□□□□□ -0.79
TREX1-202ENST00000444177 ZNF331Q9NQX6 463 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms