RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 MORN3Q6PF18 240 aaPredicted RBP13.19□□□□□ -0.3
CPSF4-205ENST00000440514 LRRC20Q8TCA0 184 aa13.19□□□□□ -0.3
CPSF4-205ENST00000440514 RPRMQ9NS64 109 aa13.19□□□□□ -0.3
CPSF4-205ENST00000440514 TIMM9Q9Y5J7 89 aa13.19□□□□□ -0.3
CPSF4-205ENST00000440514 G3V3Q6 166 aa13.18□□□□□ -0.3
CPSF4-205ENST00000440514 SLC17A3O00476 420 aa13.18□□□□□ -0.3
CPSF4-205ENST00000440514 IGLC2P0DOY2 106 aa13.18□□□□□ -0.3
CPSF4-205ENST00000440514 PRB4P10163 310 aaPredicted RBP13.18□□□□□ -0.3
CPSF4-205ENST00000440514 NUTF2P61970 127 aaKnown RBP13.18□□□□□ -0.3
CPSF4-205ENST00000440514 MRPL32Q9BYC8 188 aaKnown RBP13.18□□□□□ -0.3
CPSF4-205ENST00000440514 TNFSF18Q9UNG2 199 aa13.18□□□□□ -0.3
CPSF4-205ENST00000440514 RFNGQ9Y644 331 aa13.18□□□□□ -0.3
CPSF4-205ENST00000440514 A0A0J9YX75 114 aa13.17□□□□□ -0.3
CPSF4-205ENST00000440514 RNF222A6NCQ9 220 aa13.17□□□□□ -0.3
CPSF4-205ENST00000440514 H3BQ15 152 aa13.17□□□□□ -0.3
CPSF4-205ENST00000440514 FAM78BQ5VT40 261 aa13.17□□□□□ -0.3
CPSF4-205ENST00000440514 LCN15Q6UWW0 184 aa13.17□□□□□ -0.3
CPSF4-205ENST00000440514 ZNF738Q8NE65 137 aa13.17□□□□□ -0.3
CPSF4-205ENST00000440514 OR4B1Q8NGF8 309 aa13.17□□□□□ -0.3
CPSF4-205ENST00000440514 DNAH7Q8WXX0 4024 aa13.16□□□□□ -0.3
CPSF4-205ENST00000440514 JTBO76095 146 aa13.16□□□□□ -0.3
CPSF4-205ENST00000440514 MBP02144 154 aa13.16□□□□□ -0.3
CPSF4-205ENST00000440514 FFAR4Q5NUL3 377 aa13.16□□□□□ -0.3
CPSF4-205ENST00000440514 EBLN2Q6P2I7 272 aa13.16□□□□□ -0.3
CPSF4-205ENST00000440514 Q6ZNX1 250 aa13.16□□□□□ -0.3
CPSF4-205ENST00000440514 MIR17HGQ75NE6 70 aa13.16□□□□□ -0.3
CPSF4-205ENST00000440514 MUC7Q8TAX7 377 aa13.16□□□□□ -0.3
CPSF4-205ENST00000440514 GNPNAT1Q96EK6 184 aaPredicted RBP13.16□□□□□ -0.3
CPSF4-205ENST00000440514 SLC50A1Q9BRV3 221 aa13.16□□□□□ -0.3
CPSF4-205ENST00000440514 SLC25A2Q9BXI2 301 aa13.16□□□□□ -0.3
CPSF4-205ENST00000440514 HMSDA8MTL9 139 aa13.15□□□□□ -0.3
CPSF4-205ENST00000440514 SMLR1H3BR10 107 aa13.15□□□□□ -0.3
CPSF4-205ENST00000440514 PYYP10082 97 aa13.15□□□□□ -0.3
CPSF4-205ENST00000440514 FXYD7P58549 80 aa13.15□□□□□ -0.3
CPSF4-205ENST00000440514 TAS2R45P59539 299 aa13.15□□□□□ -0.3
CPSF4-205ENST00000440514 SERF2P84101 59 aa13.15□□□□□ -0.3
CPSF4-205ENST00000440514 ACOT6Q3I5F7 207 aaPredicted RBP13.15□□□□□ -0.3
CPSF4-205ENST00000440514 HRH4Q9H3N8 390 aa13.15□□□□□ -0.3
CPSF4-205ENST00000440514 ZNF331Q9NQX6 463 aaPredicted RBP13.15□□□□□ -0.3
CPSF4-205ENST00000440514 TMEM14CQ9P0S9 112 aa13.15□□□□□ -0.3
CPSF4-205ENST00000440514 A0A0J9YWU9 116 aa13.14□□□□□ -0.31
CPSF4-205ENST00000440514 ZNF705DP0CH99 300 aaPredicted RBP13.14□□□□□ -0.31
CPSF4-205ENST00000440514 ZNF705BP0CI00 300 aaPredicted RBP13.14□□□□□ -0.31
CPSF4-205ENST00000440514 RHOBP62745 196 aa13.14□□□□□ -0.31
CPSF4-205ENST00000440514 ZNF345Q14585 488 aa13.14□□□□□ -0.31
CPSF4-205ENST00000440514 PSG3Q16557 428 aa13.14□□□□□ -0.31
CPSF4-205ENST00000440514 OR11H2Q8NH07 326 aa13.14□□□□□ -0.31
CPSF4-205ENST00000440514 FAM167A-AS1Q96KT0 104 aa13.14□□□□□ -0.31
CPSF4-205ENST00000440514 RARRES2Q99969 163 aa13.14□□□□□ -0.31
CPSF4-205ENST00000440514 PSMG3Q9BT73 122 aaPredicted RBP13.14□□□□□ -0.31
CPSF4-205ENST00000440514 MFFQ9GZY8 342 aa13.14□□□□□ -0.31
CPSF4-205ENST00000440514 SLC35B3Q9H1N7 401 aa13.14□□□□□ -0.31
CPSF4-205ENST00000440514 ZNF586Q9NXT0 402 aa13.14□□□□□ -0.31
CPSF4-205ENST00000440514 XCL2Q9UBD3 114 aa13.14□□□□□ -0.31
CPSF4-205ENST00000440514 ARPC5O15511 151 aa13.13□□□□□ -0.31
CPSF4-205ENST00000440514 ZNF253O75346 499 aa13.13□□□□□ -0.31
CPSF4-205ENST00000440514 PDE6HQ13956 83 aa13.13□□□□□ -0.31
CPSF4-205ENST00000440514 HSD17B11Q8NBQ5 300 aa13.13□□□□□ -0.31
CPSF4-205ENST00000440514 SAT2Q96F10 170 aaPredicted RBP13.13□□□□□ -0.31
CPSF4-205ENST00000440514 CLUHP3Q96NS8 147 aa13.13□□□□□ -0.31
CPSF4-205ENST00000440514 C1QTNF4Q9BXJ3 329 aa13.13□□□□□ -0.31
CPSF4-205ENST00000440514 FUT9Q9Y231 359 aa13.13□□□□□ -0.31
CPSF4-205ENST00000440514 A0A0D9SG52 128 aa13.12□□□□□ -0.31
CPSF4-205ENST00000440514 A0A1W2PPV4 95 aa13.12□□□□□ -0.31
CPSF4-205ENST00000440514 CNN1P51911 297 aaKnown RBP13.12□□□□□ -0.31
CPSF4-205ENST00000440514 EIF5AP63241 154 aaKnown RBP13.12□□□□□ -0.31
CPSF4-205ENST00000440514 ZFAND6Q6FIF0 208 aa13.12□□□□□ -0.31
CPSF4-205ENST00000440514 CSNK1G2-AS1Q8NCQ2 148 aa13.12□□□□□ -0.31
CPSF4-205ENST00000440514 OR2G3Q8NGZ4 309 aa13.12□□□□□ -0.31
CPSF4-205ENST00000440514 A8MTW9 85 aa13.11□□□□□ -0.31
CPSF4-205ENST00000440514 ZNF705FA8MVS1 300 aaPredicted RBP13.11□□□□□ -0.31
CPSF4-205ENST00000440514 EIF3GO75821 320 aaKnown RBP eCLIP13.11□□□□□ -0.31
CPSF4-205ENST00000440514 DUSP14O95147 198 aaKnown RBP13.11□□□□□ -0.31
CPSF4-205ENST00000440514 HIST1H1EP10412 219 aaKnown RBP13.11□□□□□ -0.31
CPSF4-205ENST00000440514 M6PRP20645 277 aa13.11□□□□□ -0.31
CPSF4-205ENST00000440514 RAB2AP61019 212 aa13.11□□□□□ -0.31
CPSF4-205ENST00000440514 PSG9Q00887 426 aa13.11□□□□□ -0.31
CPSF4-205ENST00000440514 HIST1H1AQ02539 215 aaPredicted RBP13.11□□□□□ -0.31
CPSF4-205ENST00000440514 AMTNQ6UX39 209 aa13.11□□□□□ -0.31
CPSF4-205ENST00000440514 OR8A1Q8NGG7 326 aa13.11□□□□□ -0.31
CPSF4-205ENST00000440514 RPUSD4Q96CM3 377 aaKnown RBP13.11□□□□□ -0.31
CPSF4-205ENST00000440514 TRBV19A0A075B6N1 114 aa13.1□□□□□ -0.31
CPSF4-205ENST00000440514 C3orf84H3BNL1 204 aa13.1□□□□□ -0.31
CPSF4-205ENST00000440514 OR10J4P0C629 311 aa13.1□□□□□ -0.31
CPSF4-205ENST00000440514 KHDC3LQ587J8 217 aa13.1□□□□□ -0.31
CPSF4-205ENST00000440514 RPL7L1Q6DKI1 246 aaKnown RBP13.1□□□□□ -0.31
CPSF4-205ENST00000440514 BLNKQ8WV28 456 aa13.1□□□□□ -0.31
CPSF4-205ENST00000440514 PRAC2D3DTV9 90 aa13.09□□□□□ -0.31
CPSF4-205ENST00000440514 DEFB4AO15263 64 aa13.09□□□□□ -0.31
CPSF4-205ENST00000440514 OR7C2O60412 319 aa13.09□□□□□ -0.31
CPSF4-205ENST00000440514 NDUFB4O95168 129 aa13.09□□□□□ -0.31
CPSF4-205ENST00000440514 ATP6V0CP27449 155 aa13.09□□□□□ -0.31
CPSF4-205ENST00000440514 TCTE3Q8IZS6 198 aa13.09□□□□□ -0.31
CPSF4-205ENST00000440514 ARPC5LQ9BPX5 153 aa13.09□□□□□ -0.31
CPSF4-205ENST00000440514 PAXXQ9BUH6 204 aa13.09□□□□□ -0.31
CPSF4-205ENST00000440514 SH3BGRL3Q9H299 93 aa13.09□□□□□ -0.31
CPSF4-205ENST00000440514 OR51M1Q9H341 326 aa13.09□□□□□ -0.31
CPSF4-205ENST00000440514 PRELID1Q9Y255 219 aa13.09□□□□□ -0.31
CPSF4-205ENST00000440514 X6R8D5 127 aa13.09□□□□□ -0.31
CPSF4-205ENST00000440514 KANTRA0A1W2PQU2 76 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms