RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 DNAJC4Q9NNZ3 241 aa9.93□□□□□ -0.82
LTBR-202ENST00000440421 RNF24Q9Y225 148 aa9.93□□□□□ -0.82
LTBR-202ENST00000440421 H3BTX0 84 aa9.92□□□□□ -0.82
LTBR-202ENST00000440421 CXCL3P19876 107 aa9.92□□□□□ -0.82
LTBR-202ENST00000440421 CNN1P51911 297 aaKnown RBP9.92□□□□□ -0.82
LTBR-202ENST00000440421 OPCMLQ14982 345 aa9.92□□□□□ -0.82
LTBR-202ENST00000440421 OR5C1Q8NGR4 320 aa9.92□□□□□ -0.82
LTBR-202ENST00000440421 PPP1R1CQ8WVI7 109 aa9.92□□□□□ -0.82
LTBR-202ENST00000440421 SLC25A31Q9H0C2 315 aa9.92□□□□□ -0.82
LTBR-202ENST00000440421 SLC39A9Q9NUM3 307 aa9.92□□□□□ -0.82
LTBR-202ENST00000440421 PXMP4Q9Y6I8 212 aa9.92□□□□□ -0.82
LTBR-202ENST00000440421 TRAV5A0A0B4J249 113 aa9.91□□□□□ -0.82
LTBR-202ENST00000440421 DUSP14O95147 198 aaKnown RBP9.91□□□□□ -0.82
LTBR-202ENST00000440421 RPL29P47914 159 aaKnown RBP9.91□□□□□ -0.82
LTBR-202ENST00000440421 B2MP61769 119 aa9.91□□□□□ -0.82
LTBR-202ENST00000440421 CLINT1Q14677 625 aa9.91□□□□□ -0.82
LTBR-202ENST00000440421 ZNF705AQ6ZN79 300 aaPredicted RBP9.91□□□□□ -0.82
LTBR-202ENST00000440421 BPIFA4PQ86YQ2 179 aa9.91□□□□□ -0.82
LTBR-202ENST00000440421 OR1L4Q8NGR5 311 aa9.91□□□□□ -0.82
LTBR-202ENST00000440421 THAP6Q8TBB0 222 aa9.91□□□□□ -0.82
LTBR-202ENST00000440421 PFDN5Q99471 154 aa9.91□□□□□ -0.82
LTBR-202ENST00000440421 RYR2Q92736 4967 aa9.9□□□□□ -0.82
LTBR-202ENST00000440421 ZNF705FA8MVS1 300 aaPredicted RBP9.9□□□□□ -0.82
LTBR-202ENST00000440421 LY6G6CO95867 125 aa9.9□□□□□ -0.82
LTBR-202ENST00000440421 HIST1H1AQ02539 215 aaPredicted RBP9.9□□□□□ -0.82
LTBR-202ENST00000440421 PSG3Q16557 428 aa9.9□□□□□ -0.82
LTBR-202ENST00000440421 SPINK13Q1W4C9 94 aa9.9□□□□□ -0.82
LTBR-202ENST00000440421 LCN15Q6UWW0 184 aa9.9□□□□□ -0.82
LTBR-202ENST00000440421 AMTNQ6UX39 209 aa9.9□□□□□ -0.82
LTBR-202ENST00000440421 ZNF767PQ75MW2 155 aa9.9□□□□□ -0.82
LTBR-202ENST00000440421 OR11H7Q8NGC8 314 aa9.9□□□□□ -0.82
LTBR-202ENST00000440421 LINC00476Q8WZB0 136 aa9.9□□□□□ -0.82
LTBR-202ENST00000440421 NPCDR1Q9BY65 106 aa9.9□□□□□ -0.82
LTBR-202ENST00000440421 HRH4Q9H3N8 390 aa9.9□□□□□ -0.82
LTBR-202ENST00000440421 CELA1Q9UNI1 258 aa9.9□□□□□ -0.82
LTBR-202ENST00000440421 GOLT1BQ9Y3E0 138 aa9.9□□□□□ -0.82
LTBR-202ENST00000440421 A8MTW9 85 aa9.89□□□□□ -0.83
LTBR-202ENST00000440421 H3BQ15 152 aa9.89□□□□□ -0.83
LTBR-202ENST00000440421 M0R2Z0 102 aa9.89□□□□□ -0.83
LTBR-202ENST00000440421 SLC17A3O00476 420 aa9.89□□□□□ -0.83
LTBR-202ENST00000440421 MPDU1O75352 247 aa9.89□□□□□ -0.83
LTBR-202ENST00000440421 MPC2O95563 127 aa9.89□□□□□ -0.83
LTBR-202ENST00000440421 EMP1P54849 157 aa9.89□□□□□ -0.83
LTBR-202ENST00000440421 RHOBP62745 196 aa9.89□□□□□ -0.83
LTBR-202ENST00000440421 C1orf158Q8N1D5 194 aa9.89□□□□□ -0.83
LTBR-202ENST00000440421 OR8A1Q8NGG7 326 aa9.89□□□□□ -0.83
LTBR-202ENST00000440421 CHAC2Q8WUX2 184 aa9.89□□□□□ -0.83
LTBR-202ENST00000440421 RPUSD4Q96CM3 377 aaKnown RBP9.89□□□□□ -0.83
LTBR-202ENST00000440421 SLC50A1Q9BRV3 221 aa9.89□□□□□ -0.83
LTBR-202ENST00000440421 RNF126Q9BV68 326 aa9.89□□□□□ -0.83
LTBR-202ENST00000440421 ZNF331Q9NQX6 463 aaPredicted RBP9.89□□□□□ -0.83
LTBR-202ENST00000440421 ALG5Q9Y673 324 aa9.89□□□□□ -0.83
LTBR-202ENST00000440421 SACSQ9NZJ4 4579 aa9.89□□□□□ -0.83
LTBR-202ENST00000440421 IGLC2P0DOY2 106 aa9.88□□□□□ -0.83
LTBR-202ENST00000440421 CXCL2P19875 107 aa9.88□□□□□ -0.83
LTBR-202ENST00000440421 GCSAMLQ5JQS6 135 aa9.88□□□□□ -0.83
LTBR-202ENST00000440421 Q6ZTC4 211 aa9.88□□□□□ -0.83
LTBR-202ENST00000440421 C2CD4CQ8TF44 421 aa9.88□□□□□ -0.83
LTBR-202ENST00000440421 IGF2BP2-AS1Q96M15 143 aa9.88□□□□□ -0.83
LTBR-202ENST00000440421 NEU1Q99519 415 aa9.88□□□□□ -0.83
LTBR-202ENST00000440421 TMEM208Q9BTX3 173 aa9.88□□□□□ -0.83
LTBR-202ENST00000440421 PPP1R14DQ9NXH3 145 aa9.88□□□□□ -0.83
LTBR-202ENST00000440421 SMIM9A6NGZ8 99 aa9.87□□□□□ -0.83
LTBR-202ENST00000440421 BOLA2-SMG1P6H3BVE0 249 aa9.87□□□□□ -0.83
LTBR-202ENST00000440421 PTTG1O95997 202 aa9.87□□□□□ -0.83
LTBR-202ENST00000440421 HBE1P02100 147 aa9.87□□□□□ -0.83
LTBR-202ENST00000440421 PET100P0DJ07 73 aa9.87□□□□□ -0.83
LTBR-202ENST00000440421 BAP18Q8IXM2 172 aa9.87□□□□□ -0.83
LTBR-202ENST00000440421 SMIM3Q9BZL3 60 aa9.87□□□□□ -0.83
LTBR-202ENST00000440421 RFNGQ9Y644 331 aa9.87□□□□□ -0.83
LTBR-202ENST00000440421 TRAV12-2A0A075B6T6 113 aa9.86□□□□□ -0.83
LTBR-202ENST00000440421 IGLL5B9A064 214 aa9.86□□□□□ -0.83
LTBR-202ENST00000440421 C11orf94C9JXX5 98 aa9.86□□□□□ -0.83
LTBR-202ENST00000440421 CRXO43186 299 aaPredicted RBP9.86□□□□□ -0.83
LTBR-202ENST00000440421 INSP01308 110 aa9.86□□□□□ -0.83
LTBR-202ENST00000440421 AMBPP02760 352 aa9.86□□□□□ -0.83
LTBR-202ENST00000440421 C12orf74Q32Q52 190 aa9.86□□□□□ -0.83
LTBR-202ENST00000440421 WDR61Q9GZS3 305 aaKnown RBP9.86□□□□□ -0.83
LTBR-202ENST00000440421 ZNF586Q9NXT0 402 aa9.86□□□□□ -0.83
LTBR-202ENST00000440421 MBD2Q9UBB5 411 aa9.86□□□□□ -0.83
LTBR-202ENST00000440421 HSPB11Q9Y547 144 aa9.86□□□□□ -0.83
LTBR-202ENST00000440421 TRAV10A0A0B4J240 114 aa9.85□□□□□ -0.83
LTBR-202ENST00000440421 LOC102723971A0A1B0GUV8 181 aa9.85□□□□□ -0.83
LTBR-202ENST00000440421 TMEM189A5PLL7 270 aa9.85□□□□□ -0.83
LTBR-202ENST00000440421 PRAC2D3DTV9 90 aa9.85□□□□□ -0.83
LTBR-202ENST00000440421 PYYP10082 97 aa9.85□□□□□ -0.83
LTBR-202ENST00000440421 RPL12P30050 165 aaKnown RBP9.85□□□□□ -0.83
LTBR-202ENST00000440421 GUK1Q16774 197 aa9.85□□□□□ -0.83
LTBR-202ENST00000440421 RRN3P1Q2M238 152 aa9.85□□□□□ -0.83
LTBR-202ENST00000440421 SAT2Q96F10 170 aaPredicted RBP9.85□□□□□ -0.83
LTBR-202ENST00000440421 ATP5SQ99766 215 aa9.85□□□□□ -0.83
LTBR-202ENST00000440421 ALMS1Q8TCU4 4167 aa9.85□□□□□ -0.83
LTBR-202ENST00000440421 ZNF705GA8MUZ8 300 aaPredicted RBP9.84□□□□□ -0.83
LTBR-202ENST00000440421 PRM2P04554 102 aa9.84□□□□□ -0.83
LTBR-202ENST00000440421 SPART-AS1P0CW21 52 aa9.84□□□□□ -0.83
LTBR-202ENST00000440421 MIR17HGQ75NE6 70 aa9.84□□□□□ -0.83
LTBR-202ENST00000440421 PARD6GQ9BYG4 376 aaPredicted RBP9.84□□□□□ -0.83
LTBR-202ENST00000440421 KCNIP2Q9NS61 270 aa9.84□□□□□ -0.83
LTBR-202ENST00000440421 TMEM14CQ9P0S9 112 aa9.84□□□□□ -0.83
LTBR-202ENST00000440421 YTHDF2Q9Y5A9 579 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms