RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 CGB3P0DN86 165 aa7.23□□□□□ -1.25
COPB1-202ENST00000439561 CGB7P0DN87 165 aa7.23□□□□□ -1.25
COPB1-202ENST00000439561 CD40P25942 277 aa7.23□□□□□ -1.25
COPB1-202ENST00000439561 ARL3P36405 182 aa7.23□□□□□ -1.25
COPB1-202ENST00000439561 C1orf185Q5T7R7 199 aa7.23□□□□□ -1.25
COPB1-202ENST00000439561 LINC01545Q5VT33 79 aa7.23□□□□□ -1.25
COPB1-202ENST00000439561 OR4A5Q8NH83 315 aa7.23□□□□□ -1.25
COPB1-202ENST00000439561 IGFBPL1Q8WX77 278 aa7.23□□□□□ -1.25
COPB1-202ENST00000439561 ZNF492Q9P255 531 aa7.23□□□□□ -1.25
COPB1-202ENST00000439561 ONECUT1Q9UBC0 465 aa7.23□□□□□ -1.25
COPB1-202ENST00000439561 J3QR89 54 aa7.23□□□□□ -1.25
COPB1-202ENST00000439561 CT83Q5H943 113 aa7.23□□□□□ -1.25
COPB1-202ENST00000439561 ZNF833PQ6ZTB9 187 aa7.23□□□□□ -1.25
COPB1-202ENST00000439561 GTSCR1Q86UQ5 136 aa7.23□□□□□ -1.25
COPB1-202ENST00000439561 TRGV9Q99603 122 aa7.23□□□□□ -1.25
COPB1-202ENST00000439561 FOXC2Q99958 501 aa7.23□□□□□ -1.25
COPB1-202ENST00000439561 KLK15Q9H2R5 256 aa7.23□□□□□ -1.25
COPB1-202ENST00000439561 C1RLQ9NZP8 487 aa7.23□□□□□ -1.25
COPB1-202ENST00000439561 DKK2Q9UBU2 259 aa7.23□□□□□ -1.25
COPB1-202ENST00000439561 ZGRF1Q86YA3 2104 aa7.22□□□□□ -1.25
COPB1-202ENST00000439561 TNRC6BQ9UPQ9 1833 aaKnown RBP7.22□□□□□ -1.25
COPB1-202ENST00000439561 IGHV3OR16-13A0A075B7E8 117 aa7.22□□□□□ -1.25
COPB1-202ENST00000439561 IGHV3-74A0A0B4J1X5 117 aa7.22□□□□□ -1.25
COPB1-202ENST00000439561 PSMB11A5LHX3 300 aa7.22□□□□□ -1.25
COPB1-202ENST00000439561 NCBP2LA6PVI3 153 aaKnown RBP7.22□□□□□ -1.25
COPB1-202ENST00000439561 HAX1O00165 279 aa7.22□□□□□ -1.25
COPB1-202ENST00000439561 LGALS7P47929 136 aa7.22□□□□□ -1.25
COPB1-202ENST00000439561 SPAARA0A1B0GVQ0 90 aa7.22□□□□□ -1.25
COPB1-202ENST00000439561 H3BRM9 83 aa7.22□□□□□ -1.25
COPB1-202ENST00000439561 K7EP34 96 aa7.22□□□□□ -1.25
COPB1-202ENST00000439561 GP9P14770 177 aa7.22□□□□□ -1.25
COPB1-202ENST00000439561 LEPP41159 167 aa7.22□□□□□ -1.25
COPB1-202ENST00000439561 CR1LQ2VPA4 569 aa7.22□□□□□ -1.25
COPB1-202ENST00000439561 PPP1R27Q86WC6 154 aa7.22□□□□□ -1.25
COPB1-202ENST00000439561 JMJD8Q96S16 334 aa7.22□□□□□ -1.25
COPB1-202ENST00000439561 GFRA4Q9GZZ7 299 aa7.22□□□□□ -1.25
COPB1-202ENST00000439561 PPIAL4CA0A0B4J2A2 164 aa7.22□□□□□ -1.25
COPB1-202ENST00000439561 C19orf71A6NCJ1 209 aa7.22□□□□□ -1.25
COPB1-202ENST00000439561 ZNF785A8K8V0 405 aa7.22□□□□□ -1.25
COPB1-202ENST00000439561 LYNX1G3V0Z9 82 aa7.22□□□□□ -1.25
COPB1-202ENST00000439561 LHBP01229 141 aa7.22□□□□□ -1.25
COPB1-202ENST00000439561 PPIAL4GP0DN37 164 aa7.22□□□□□ -1.25
COPB1-202ENST00000439561 LYNX1P0DP58 116 aa7.22□□□□□ -1.25
COPB1-202ENST00000439561 PSG3Q16557 428 aa7.22□□□□□ -1.25
COPB1-202ENST00000439561 LCNL1Q6ZST4 164 aa7.22□□□□□ -1.25
COPB1-202ENST00000439561 MLST8Q9BVC4 326 aa7.22□□□□□ -1.25
COPB1-202ENST00000439561 MAP1LC3AQ9H492 121 aa7.22□□□□□ -1.25
COPB1-202ENST00000439561 SPTAN1Q13813 2472 aaKnown RBP7.21□□□□□ -1.25
COPB1-202ENST00000439561 CRXO43186 299 aaPredicted RBP7.21□□□□□ -1.25
COPB1-202ENST00000439561 C2orf91Q6ZV80 131 aa7.21□□□□□ -1.25
COPB1-202ENST00000439561 THAP8Q8NA92 274 aa7.21□□□□□ -1.25
COPB1-202ENST00000439561 APC2O95996 2303 aa7.21□□□□□ -1.25
COPB1-202ENST00000439561 WT1P19544 449 aaPredicted RBP7.21□□□□□ -1.26
COPB1-202ENST00000439561 DEFB124Q8NES8 71 aa7.21□□□□□ -1.26
COPB1-202ENST00000439561 OR4X2Q8NGF9 303 aa7.21□□□□□ -1.26
COPB1-202ENST00000439561 PRSS22Q9GZN4 317 aa7.21□□□□□ -1.26
COPB1-202ENST00000439561 C17orf100A8MU93 164 aa7.2□□□□□ -1.26
COPB1-202ENST00000439561 IGHG3P01860 377 aa7.2□□□□□ -1.26
COPB1-202ENST00000439561 TMEM75Q8N9X5 138 aa7.2□□□□□ -1.26
COPB1-202ENST00000439561 OR9G4Q8NGQ1 327 aa7.2□□□□□ -1.26
COPB1-202ENST00000439561 RNF125Q96EQ8 232 aa7.2□□□□□ -1.26
COPB1-202ENST00000439561 HIST1H4GQ99525 98 aa7.2□□□□□ -1.26
COPB1-202ENST00000439561 SPRY4Q9C004 299 aa7.2□□□□□ -1.26
COPB1-202ENST00000439561 C7orf69Q9H7B7 122 aa7.2□□□□□ -1.26
COPB1-202ENST00000439561 KLF12Q9Y4X4 402 aa7.2□□□□□ -1.26
COPB1-202ENST00000439561 IGHV3-66A0A0C4DH42 116 aa7.2□□□□□ -1.26
COPB1-202ENST00000439561 A0A1W2PPM0 123 aa7.2□□□□□ -1.26
COPB1-202ENST00000439561 CD59P13987 128 aa7.2□□□□□ -1.26
COPB1-202ENST00000439561 SPOCK3Q9BQ16 436 aa7.2□□□□□ -1.26
COPB1-202ENST00000439561 MUC3AQ02505 3323 aa7.2□□□□□ -1.26
COPB1-202ENST00000439561 IGHV3-49A0A0A0MS15 119 aa7.2□□□□□ -1.26
COPB1-202ENST00000439561 TEX48A0A1B0GUV7 120 aa7.2□□□□□ -1.26
COPB1-202ENST00000439561 SH2D1AO60880 128 aa7.2□□□□□ -1.26
COPB1-202ENST00000439561 NPYP01303 97 aa7.2□□□□□ -1.26
COPB1-202ENST00000439561 TMEM30BQ3MIR4 351 aa7.2□□□□□ -1.26
COPB1-202ENST00000439561 MRPL51Q4U2R6 128 aaKnown RBP7.2□□□□□ -1.26
COPB1-202ENST00000439561 CLEC2AQ6UVW9 174 aa7.2□□□□□ -1.26
COPB1-202ENST00000439561 OR5A1Q8NGJ0 315 aa7.2□□□□□ -1.26
COPB1-202ENST00000439561 ADAMTSL5Q6ZMM2 481 aa7.19□□□□□ -1.26
COPB1-202ENST00000439561 SIGLEC9Q9Y336 463 aa7.19□□□□□ -1.26
COPB1-202ENST00000439561 NDUFA3O95167 84 aa7.19□□□□□ -1.26
COPB1-202ENST00000439561 BSPH1Q075Z2 132 aa7.19□□□□□ -1.26
COPB1-202ENST00000439561 ZC2HC1BQ5TFG8 222 aa7.19□□□□□ -1.26
COPB1-202ENST00000439561 AMTNQ6UX39 209 aa7.19□□□□□ -1.26
COPB1-202ENST00000439561 TRBV19A0A075B6N1 114 aa7.19□□□□□ -1.26
COPB1-202ENST00000439561 C16orf97H3BN30 126 aa7.19□□□□□ -1.26
COPB1-202ENST00000439561 IGHV1-8P0DP01 117 aa7.19□□□□□ -1.26
COPB1-202ENST00000439561 MYCNOSP40205 109 aa7.19□□□□□ -1.26
COPB1-202ENST00000439561 RPS20P60866 119 aaKnown RBP7.19□□□□□ -1.26
COPB1-202ENST00000439561 FAM104BQ5XKR9 115 aa7.19□□□□□ -1.26
COPB1-202ENST00000439561 Q6AWC8 147 aa7.19□□□□□ -1.26
COPB1-202ENST00000439561 FAM169BQ8N8A8 192 aa7.19□□□□□ -1.26
COPB1-202ENST00000439561 DKK4Q9UBT3 224 aa7.19□□□□□ -1.26
COPB1-202ENST00000439561 C22orf34Q6ZV56 151 aa7.18□□□□□ -1.26
COPB1-202ENST00000439561 MYOZ3Q8TDC0 251 aa7.18□□□□□ -1.26
COPB1-202ENST00000439561 CHAC1Q9BUX1 264 aa7.18□□□□□ -1.26
COPB1-202ENST00000439561 TSSC4Q9Y5U2 329 aaPredicted RBP7.18□□□□□ -1.26
COPB1-202ENST00000439561 PCSK5Q92824 1860 aa7.18□□□□□ -1.26
COPB1-202ENST00000439561 DSCAML1Q8TD84 2053 aa7.18□□□□□ -1.26
COPB1-202ENST00000439561 DMDP11532 3685 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms