RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 INSP01308 110 aa14.42□□□□□ -0.1
NCKIPSD-206ENST00000439518 VAMP2P63027 116 aa14.42□□□□□ -0.1
NCKIPSD-206ENST00000439518 OR8A1Q8NGG7 326 aa14.42□□□□□ -0.1
NCKIPSD-206ENST00000439518 CCDC32Q9BV29 185 aa14.42□□□□□ -0.1
NCKIPSD-206ENST00000439518 ZNF705GA8MUZ8 300 aaPredicted RBP14.41□□□□□ -0.1
NCKIPSD-206ENST00000439518 FAM25EA8MYX2 175 aa14.41□□□□□ -0.1
NCKIPSD-206ENST00000439518 BOLA2-SMG1P6H3BVE0 249 aa14.41□□□□□ -0.1
NCKIPSD-206ENST00000439518 PRM2P04554 102 aa14.41□□□□□ -0.1
NCKIPSD-206ENST00000439518 LINC00305Q7Z4B0 112 aa14.41□□□□□ -0.1
NCKIPSD-206ENST00000439518 BAP18Q8IXM2 172 aa14.41□□□□□ -0.1
NCKIPSD-206ENST00000439518 C12orf45Q8N5I9 185 aaPredicted RBP14.41□□□□□ -0.1
NCKIPSD-206ENST00000439518 LRRC20Q8TCA0 184 aa14.41□□□□□ -0.1
NCKIPSD-206ENST00000439518 TMEM37Q8WXS4 190 aa14.41□□□□□ -0.1
NCKIPSD-206ENST00000439518 C2orf50Q96LR7 162 aa14.41□□□□□ -0.1
NCKIPSD-206ENST00000439518 LSM5Q9Y4Y9 91 aaKnown RBP14.41□□□□□ -0.1
NCKIPSD-206ENST00000439518 HECTD4Q9Y4D8 3996 aa14.4□□□□□ -0.1
NCKIPSD-206ENST00000439518 C5orf51A6NDU8 294 aa14.4□□□□□ -0.1
NCKIPSD-206ENST00000439518 H2AFB2P0C5Z0 115 aa14.4□□□□□ -0.1
NCKIPSD-206ENST00000439518 CXCL2P19875 107 aa14.4□□□□□ -0.1
NCKIPSD-206ENST00000439518 TSPOP30536 169 aa14.4□□□□□ -0.1
NCKIPSD-206ENST00000439518 B2MP61769 119 aa14.4□□□□□ -0.1
NCKIPSD-206ENST00000439518 HIST1H1AQ02539 215 aaPredicted RBP14.4□□□□□ -0.1
NCKIPSD-206ENST00000439518 MORN5Q5VZ52 161 aa14.4□□□□□ -0.1
NCKIPSD-206ENST00000439518 RPUSD4Q96CM3 377 aaKnown RBP14.4□□□□□ -0.1
NCKIPSD-206ENST00000439518 ZNF331Q9NQX6 463 aaPredicted RBP14.4□□□□□ -0.1
NCKIPSD-206ENST00000439518 TRAV12-2A0A075B6T6 113 aa14.39□□□□□ -0.11
NCKIPSD-206ENST00000439518 COX7A2P2O60397 106 aa14.39□□□□□ -0.11
NCKIPSD-206ENST00000439518 CST7O76096 145 aa14.39□□□□□ -0.11
NCKIPSD-206ENST00000439518 CAV2P51636 162 aa14.39□□□□□ -0.11
NCKIPSD-206ENST00000439518 DAD1P61803 113 aa14.39□□□□□ -0.11
NCKIPSD-206ENST00000439518 RHOBP62745 196 aa14.39□□□□□ -0.11
NCKIPSD-206ENST00000439518 IL15RAQ13261 267 aa14.39□□□□□ -0.11
NCKIPSD-206ENST00000439518 LCN15Q6UWW0 184 aa14.39□□□□□ -0.11
NCKIPSD-206ENST00000439518 LINC00299Q6ZSB3 139 aa14.39□□□□□ -0.11
NCKIPSD-206ENST00000439518 FAM24AA6NFZ4 105 aa14.38□□□□□ -0.11
NCKIPSD-206ENST00000439518 HTN3P15516 51 aa14.38□□□□□ -0.11
NCKIPSD-206ENST00000439518 CAMLGP49069 296 aa14.38□□□□□ -0.11
NCKIPSD-206ENST00000439518 BCAP31P51572 246 aa14.38□□□□□ -0.11
NCKIPSD-206ENST00000439518 BPIFA4PQ86YQ2 179 aa14.38□□□□□ -0.11
NCKIPSD-206ENST00000439518 WDR83OSQ9Y284 106 aa14.38□□□□□ -0.11
NCKIPSD-206ENST00000439518 PLAC8L1A1L4L8 177 aa14.37□□□□□ -0.11
NCKIPSD-206ENST00000439518 LYRM9A8MSI8 78 aa14.37□□□□□ -0.11
NCKIPSD-206ENST00000439518 SNRPCP09234 159 aaKnown RBP14.37□□□□□ -0.11
NCKIPSD-206ENST00000439518 PRB4P10163 310 aaPredicted RBP14.37□□□□□ -0.11
NCKIPSD-206ENST00000439518 AZU1P20160 251 aa14.37□□□□□ -0.11
NCKIPSD-206ENST00000439518 RAB31Q13636 194 aa14.37□□□□□ -0.11
NCKIPSD-206ENST00000439518 OPCMLQ14982 345 aa14.37□□□□□ -0.11
NCKIPSD-206ENST00000439518 VWC2Q2TAL6 325 aa14.37□□□□□ -0.11
NCKIPSD-206ENST00000439518 C10orf113Q5VZT2 155 aa14.37□□□□□ -0.11
NCKIPSD-206ENST00000439518 NRARPQ7Z6K4 114 aa14.37□□□□□ -0.11
NCKIPSD-206ENST00000439518 SLC50A1Q9BRV3 221 aa14.37□□□□□ -0.11
NCKIPSD-206ENST00000439518 DNAJC4Q9NNZ3 241 aa14.37□□□□□ -0.11
NCKIPSD-206ENST00000439518 UQCC1Q9NVA1 299 aa14.37□□□□□ -0.11
NCKIPSD-206ENST00000439518 FAM240BA0A1B0GVZ2 78 aa14.36□□□□□ -0.11
NCKIPSD-206ENST00000439518 IGLC2P0DOY2 106 aa14.36□□□□□ -0.11
NCKIPSD-206ENST00000439518 TMEM256Q8N2U0 113 aa14.36□□□□□ -0.11
NCKIPSD-206ENST00000439518 LYRM2Q9NU23 88 aaPredicted RBP14.36□□□□□ -0.11
NCKIPSD-206ENST00000439518 H3BQ15 152 aa14.35□□□□□ -0.11
NCKIPSD-206ENST00000439518 SLC17A3O00476 420 aa14.35□□□□□ -0.11
NCKIPSD-206ENST00000439518 PVALBP20472 110 aaPredicted RBP14.35□□□□□ -0.11
NCKIPSD-206ENST00000439518 SULT1A1P50225 295 aa14.35□□□□□ -0.11
NCKIPSD-206ENST00000439518 RAB32Q13637 225 aa14.35□□□□□ -0.11
NCKIPSD-206ENST00000439518 MIC13Q5XKP0 118 aa14.35□□□□□ -0.11
NCKIPSD-206ENST00000439518 TMEM88Q6PEY1 159 aa14.35□□□□□ -0.11
NCKIPSD-206ENST00000439518 LINC00336Q6ZUF6 198 aa14.35□□□□□ -0.11
NCKIPSD-206ENST00000439518 SAT2Q96F10 170 aaPredicted RBP14.35□□□□□ -0.11
NCKIPSD-206ENST00000439518 PPP1R14DQ9NXH3 145 aa14.35□□□□□ -0.11
NCKIPSD-206ENST00000439518 IGSF23A1L1A6 192 aa14.34□□□□□ -0.11
NCKIPSD-206ENST00000439518 H3BTX0 84 aa14.34□□□□□ -0.11
NCKIPSD-206ENST00000439518 CDKN1BP46527 198 aa14.34□□□□□ -0.11
NCKIPSD-206ENST00000439518 TAS2R60P59551 318 aa14.34□□□□□ -0.11
NCKIPSD-206ENST00000439518 ASAH1Q13510 395 aa14.34□□□□□ -0.11
NCKIPSD-206ENST00000439518 Q6ZRG5 221 aa14.34□□□□□ -0.11
NCKIPSD-206ENST00000439518 TMEM252Q8N6L7 170 aa14.34□□□□□ -0.11
NCKIPSD-206ENST00000439518 LINC01587Q99440 93 aa14.34□□□□□ -0.11
NCKIPSD-206ENST00000439518 PRAC2D3DTV9 90 aa14.33□□□□□ -0.12
NCKIPSD-206ENST00000439518 S100A11P31949 105 aa14.33□□□□□ -0.12
NCKIPSD-206ENST00000439518 RPL29P47914 159 aaKnown RBP14.33□□□□□ -0.12
NCKIPSD-206ENST00000439518 S100A10P60903 97 aa14.33□□□□□ -0.12
NCKIPSD-206ENST00000439518 LGALS9BQ3B8N2 356 aa14.33□□□□□ -0.12
NCKIPSD-206ENST00000439518 RNF212Q495C1 297 aa14.33□□□□□ -0.12
NCKIPSD-206ENST00000439518 MZT2BQ6NZ67 158 aa14.33□□□□□ -0.12
NCKIPSD-206ENST00000439518 CHAC2Q8WUX2 184 aa14.33□□□□□ -0.12
NCKIPSD-206ENST00000439518 PXMP4Q9Y6I8 212 aa14.33□□□□□ -0.12
NCKIPSD-206ENST00000439518 TRAV5A0A0B4J249 113 aa14.32□□□□□ -0.12
NCKIPSD-206ENST00000439518 M0R2N4 97 aa14.32□□□□□ -0.12
NCKIPSD-206ENST00000439518 DEFB130BP0DP73 79 aa14.32□□□□□ -0.12
NCKIPSD-206ENST00000439518 DEFB130AP0DP74 79 aa14.32□□□□□ -0.12
NCKIPSD-206ENST00000439518 GUK1Q16774 197 aa14.32□□□□□ -0.12
NCKIPSD-206ENST00000439518 OR1L4Q8NGR5 311 aa14.32□□□□□ -0.12
NCKIPSD-206ENST00000439518 S100ZQ8WXG8 99 aa14.32□□□□□ -0.12
NCKIPSD-206ENST00000439518 SLC39A9Q9NUM3 307 aa14.32□□□□□ -0.12
NCKIPSD-206ENST00000439518 UBE2L5PA0A1B0GUS4 154 aa14.31□□□□□ -0.12
NCKIPSD-206ENST00000439518 RTL8CO15255 209 aa14.31□□□□□ -0.12
NCKIPSD-206ENST00000439518 HBG1P69891 147 aa14.31□□□□□ -0.12
NCKIPSD-206ENST00000439518 HBG2P69892 147 aa14.31□□□□□ -0.12
NCKIPSD-206ENST00000439518 KIR3DS1Q14943 382 aa14.31□□□□□ -0.12
NCKIPSD-206ENST00000439518 FCN2Q15485 313 aa14.31□□□□□ -0.12
NCKIPSD-206ENST00000439518 STX12Q86Y82 276 aa14.31□□□□□ -0.12
NCKIPSD-206ENST00000439518 UBE2DNLQ8IWF7 75 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms