RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 A0A0J9YX75 114 aa11.97□□□□□ -0.49
CTSD-205ENST00000438213 DUSP14O95147 198 aaKnown RBP11.97□□□□□ -0.49
CTSD-205ENST00000438213 ZNF266Q14584 549 aa11.97□□□□□ -0.49
CTSD-205ENST00000438213 PSG3Q16557 428 aa11.97□□□□□ -0.49
CTSD-205ENST00000438213 GCSAMLQ5JQS6 135 aa11.97□□□□□ -0.49
CTSD-205ENST00000438213 GDF5OSQ5U4N7 250 aa11.97□□□□□ -0.49
CTSD-205ENST00000438213 IGFL4Q6B9Z1 124 aa11.97□□□□□ -0.49
CTSD-205ENST00000438213 RNF182Q8N6D2 247 aa11.97□□□□□ -0.49
CTSD-205ENST00000438213 ZNF738Q8NE65 137 aa11.97□□□□□ -0.49
CTSD-205ENST00000438213 TMEM14CQ9P0S9 112 aa11.97□□□□□ -0.49
CTSD-205ENST00000438213 HUWE1Q7Z6Z7 4374 aaKnown RBP11.97□□□□□ -0.49
CTSD-205ENST00000438213 FXYD6-FXYD2A0A087WZ82 144 aa11.96□□□□□ -0.49
CTSD-205ENST00000438213 IGKV3-20P01619 116 aa11.96□□□□□ -0.49
CTSD-205ENST00000438213 GIG44P09565 113 aaPredicted RBP11.96□□□□□ -0.49
CTSD-205ENST00000438213 IGLC2P0DOY2 106 aa11.96□□□□□ -0.49
CTSD-205ENST00000438213 DEFB1P60022 68 aa11.96□□□□□ -0.49
CTSD-205ENST00000438213 PSG9Q00887 426 aa11.96□□□□□ -0.49
CTSD-205ENST00000438213 FFAR4Q5NUL3 377 aa11.96□□□□□ -0.49
CTSD-205ENST00000438213 MRPL32Q9BYC8 188 aaKnown RBP11.96□□□□□ -0.49
CTSD-205ENST00000438213 ZNF331Q9NQX6 463 aaPredicted RBP11.96□□□□□ -0.49
CTSD-205ENST00000438213 F6UB75 175 aa11.95□□□□□ -0.5
CTSD-205ENST00000438213 H3BQ15 152 aa11.95□□□□□ -0.5
CTSD-205ENST00000438213 SNRPCP09234 159 aaKnown RBP11.95□□□□□ -0.5
CTSD-205ENST00000438213 HIST1H1EP10412 219 aaKnown RBP11.95□□□□□ -0.5
CTSD-205ENST00000438213 XCL2Q9UBD3 114 aa11.95□□□□□ -0.5
CTSD-205ENST00000438213 A0A0J9YWU9 116 aa11.94□□□□□ -0.5
CTSD-205ENST00000438213 ZNF253O75346 499 aa11.94□□□□□ -0.5
CTSD-205ENST00000438213 C4BPBP20851 252 aa11.94□□□□□ -0.5
CTSD-205ENST00000438213 SAT2Q96F10 170 aaPredicted RBP11.94□□□□□ -0.5
CTSD-205ENST00000438213 TNFSF18Q9UNG2 199 aa11.94□□□□□ -0.5
CTSD-205ENST00000438213 FUT9Q9Y231 359 aa11.94□□□□□ -0.5
CTSD-205ENST00000438213 TIMM9Q9Y5J7 89 aa11.94□□□□□ -0.5
CTSD-205ENST00000438213 H3BTX0 84 aa11.93□□□□□ -0.5
CTSD-205ENST00000438213 RHOBP62745 196 aa11.93□□□□□ -0.5
CTSD-205ENST00000438213 ACOT6Q3I5F7 207 aaPredicted RBP11.93□□□□□ -0.5
CTSD-205ENST00000438213 MIR17HGQ75NE6 70 aa11.93□□□□□ -0.5
CTSD-205ENST00000438213 CSNK1G2-AS1Q8NCQ2 148 aa11.93□□□□□ -0.5
CTSD-205ENST00000438213 RPUSD4Q96CM3 377 aaKnown RBP11.93□□□□□ -0.5
CTSD-205ENST00000438213 OR51M1Q9H341 326 aa11.93□□□□□ -0.5
CTSD-205ENST00000438213 PPP1R14DQ9NXH3 145 aa11.93□□□□□ -0.5
CTSD-205ENST00000438213 ZNF586Q9NXT0 402 aa11.93□□□□□ -0.5
CTSD-205ENST00000438213 TRBV19A0A075B6N1 114 aa11.92□□□□□ -0.5
CTSD-205ENST00000438213 BORCS7-ASMTA0A0B4J1R7 106 aa11.92□□□□□ -0.5
CTSD-205ENST00000438213 HLA-DMBP28068 263 aa11.92□□□□□ -0.5
CTSD-205ENST00000438213 CNN1P51911 297 aaKnown RBP11.92□□□□□ -0.5
CTSD-205ENST00000438213 TAS2R45P59539 299 aa11.92□□□□□ -0.5
CTSD-205ENST00000438213 PDE6HQ13956 83 aa11.92□□□□□ -0.5
CTSD-205ENST00000438213 OR8A1Q8NGG7 326 aa11.92□□□□□ -0.5
CTSD-205ENST00000438213 PAXXQ9BUH6 204 aa11.92□□□□□ -0.5
CTSD-205ENST00000438213 SLC25A2Q9BXI2 301 aa11.92□□□□□ -0.5
CTSD-205ENST00000438213 MFFQ9GZY8 342 aa11.92□□□□□ -0.5
CTSD-205ENST00000438213 A0A1W2PPV4 95 aa11.91□□□□□ -0.5
CTSD-205ENST00000438213 A8MTW9 85 aa11.91□□□□□ -0.5
CTSD-205ENST00000438213 SLC17A3O00476 420 aa11.91□□□□□ -0.5
CTSD-205ENST00000438213 AMBPP02760 352 aa11.91□□□□□ -0.5
CTSD-205ENST00000438213 NBEAP1P0C6P0 100 aa11.91□□□□□ -0.5
CTSD-205ENST00000438213 PYYP10082 97 aa11.91□□□□□ -0.5
CTSD-205ENST00000438213 MIFP14174 115 aa11.91□□□□□ -0.5
CTSD-205ENST00000438213 M6PRP20645 277 aa11.91□□□□□ -0.5
CTSD-205ENST00000438213 FXYD7P58549 80 aa11.91□□□□□ -0.5
CTSD-205ENST00000438213 HIST1H1AQ02539 215 aaPredicted RBP11.91□□□□□ -0.5
CTSD-205ENST00000438213 HSD17B11Q8NBQ5 300 aa11.91□□□□□ -0.5
CTSD-205ENST00000438213 FAM167A-AS1Q96KT0 104 aa11.91□□□□□ -0.5
CTSD-205ENST00000438213 SLC35B3Q9H1N7 401 aa11.91□□□□□ -0.5
CTSD-205ENST00000438213 PRELID1Q9Y255 219 aa11.91□□□□□ -0.5
CTSD-205ENST00000438213 RNF222A6NCQ9 220 aa11.9□□□□□ -0.5
CTSD-205ENST00000438213 ZNF705EA8MWA4 302 aaPredicted RBP11.9□□□□□ -0.5
CTSD-205ENST00000438213 TAAR5O14804 337 aa11.9□□□□□ -0.5
CTSD-205ENST00000438213 OR7C2O60412 319 aa11.9□□□□□ -0.5
CTSD-205ENST00000438213 ZNF705DP0CH99 300 aaPredicted RBP11.9□□□□□ -0.5
CTSD-205ENST00000438213 ZNF705BP0CI00 300 aaPredicted RBP11.9□□□□□ -0.5
CTSD-205ENST00000438213 CASC10Q5T4H9 136 aa11.9□□□□□ -0.5
CTSD-205ENST00000438213 OR10J6PQ8NGY7 276 aa11.9□□□□□ -0.5
CTSD-205ENST00000438213 BLNKQ8WV28 456 aa11.9□□□□□ -0.5
CTSD-205ENST00000438213 RNF141Q8WVD5 230 aa11.9□□□□□ -0.5
CTSD-205ENST00000438213 PSMG3Q9BT73 122 aaPredicted RBP11.9□□□□□ -0.5
CTSD-205ENST00000438213 AAMDCQ9H7C9 122 aa11.9□□□□□ -0.5
CTSD-205ENST00000438213 ZNF705FA8MVS1 300 aaPredicted RBP11.89□□□□□ -0.51
CTSD-205ENST00000438213 ARPC5O15511 151 aa11.89□□□□□ -0.51
CTSD-205ENST00000438213 MBP02144 154 aa11.89□□□□□ -0.51
CTSD-205ENST00000438213 SERF2P84101 59 aa11.89□□□□□ -0.51
CTSD-205ENST00000438213 KHDC3LQ587J8 217 aa11.89□□□□□ -0.51
CTSD-205ENST00000438213 ZFAND6Q6FIF0 208 aa11.89□□□□□ -0.51
CTSD-205ENST00000438213 AMTNQ6UX39 209 aa11.89□□□□□ -0.51
CTSD-205ENST00000438213 GNPNAT1Q96EK6 184 aaPredicted RBP11.89□□□□□ -0.51
CTSD-205ENST00000438213 MRPL53Q96EL3 112 aaKnown RBP11.89□□□□□ -0.51
CTSD-205ENST00000438213 C11orf68Q9H3H3 251 aaKnown RBP11.89□□□□□ -0.51
CTSD-205ENST00000438213 GOLT1BQ9Y3E0 138 aa11.89□□□□□ -0.51
CTSD-205ENST00000438213 RFNGQ9Y644 331 aa11.89□□□□□ -0.51
CTSD-205ENST00000438213 SMIM9A6NGZ8 99 aa11.88□□□□□ -0.51
CTSD-205ENST00000438213 G3V3Q6 166 aa11.88□□□□□ -0.51
CTSD-205ENST00000438213 NDUFB4O95168 129 aa11.88□□□□□ -0.51
CTSD-205ENST00000438213 ATP6V0CP27449 155 aa11.88□□□□□ -0.51
CTSD-205ENST00000438213 OR10G4Q8NGN3 311 aa11.88□□□□□ -0.51
CTSD-205ENST00000438213 OR10G9Q8NGN4 311 aa11.88□□□□□ -0.51
CTSD-205ENST00000438213 OR10G7Q8NGN6 311 aa11.88□□□□□ -0.51
CTSD-205ENST00000438213 OR2G3Q8NGZ4 309 aa11.88□□□□□ -0.51
CTSD-205ENST00000438213 SMLR1H3BR10 107 aa11.87□□□□□ -0.51
CTSD-205ENST00000438213 JTBO76095 146 aa11.87□□□□□ -0.51
CTSD-205ENST00000438213 OR10J4P0C629 311 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms