RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 U3KQE9 123 aa11.87□□□□□ -0.51
SGCE-205ENST00000437425 TEP1Q99973 2627 aaKnown RBP11.87□□□□□ -0.51
SGCE-205ENST00000437425 A0A1W2PS18 150 aa11.86□□□□□ -0.51
SGCE-205ENST00000437425 LTAP01374 205 aa11.86□□□□□ -0.51
SGCE-205ENST00000437425 MGST1P10620 155 aaKnown RBP11.86□□□□□ -0.51
SGCE-205ENST00000437425 GNG5P63218 68 aa11.86□□□□□ -0.51
SGCE-205ENST00000437425 FOXE3Q13461 319 aa11.86□□□□□ -0.51
SGCE-205ENST00000437425 IBA57Q5T440 356 aaKnown RBP11.86□□□□□ -0.51
SGCE-205ENST00000437425 Q6ZS46 218 aa11.86□□□□□ -0.51
SGCE-205ENST00000437425 Q8N2B8 174 aa11.86□□□□□ -0.51
SGCE-205ENST00000437425 GRAMD2BQ96HH9 432 aa11.86□□□□□ -0.51
SGCE-205ENST00000437425 SLC50A1Q9BRV3 221 aa11.86□□□□□ -0.51
SGCE-205ENST00000437425 ZFP30Q9Y2G7 519 aa11.86□□□□□ -0.51
SGCE-205ENST00000437425 CLPSL1A2RUU4 121 aa11.86□□□□□ -0.51
SGCE-205ENST00000437425 SMAD7O15105 426 aaKnown RBP11.86□□□□□ -0.51
SGCE-205ENST00000437425 RPEL1Q2QD12 228 aa11.86□□□□□ -0.51
SGCE-205ENST00000437425 EXOC3-AS1Q8N2X6 119 aa11.86□□□□□ -0.51
SGCE-205ENST00000437425 CIARTQ8N365 385 aaPredicted RBP11.86□□□□□ -0.51
SGCE-205ENST00000437425 A0A1W2PPQ1 181 aa11.85□□□□□ -0.51
SGCE-205ENST00000437425 ZNF785A8K8V0 405 aa11.85□□□□□ -0.51
SGCE-205ENST00000437425 H3BTX0 84 aa11.85□□□□□ -0.51
SGCE-205ENST00000437425 S100A6P06703 90 aa11.85□□□□□ -0.51
SGCE-205ENST00000437425 SNRPCP09234 159 aaKnown RBP11.85□□□□□ -0.51
SGCE-205ENST00000437425 LINC00479Q96M42 142 aa11.85□□□□□ -0.51
SGCE-205ENST00000437425 MLST8Q9BVC4 326 aa11.85□□□□□ -0.51
SGCE-205ENST00000437425 KLK15Q9H2R5 256 aa11.85□□□□□ -0.51
SGCE-205ENST00000437425 ZNF702PQ9H963 129 aa11.85□□□□□ -0.51
SGCE-205ENST00000437425 PEF1Q9UBV8 284 aaKnown RBP11.85□□□□□ -0.51
SGCE-205ENST00000437425 RPH3ALQ9UNE2 315 aa11.85□□□□□ -0.51
SGCE-205ENST00000437425 V9GYV3 84 aa11.85□□□□□ -0.51
SGCE-205ENST00000437425 TRAV34A0A0B4J273 112 aa11.84□□□□□ -0.51
SGCE-205ENST00000437425 IGHV3-35A0A0C4DH35 117 aa11.84□□□□□ -0.51
SGCE-205ENST00000437425 DIRC3C9JPN6 131 aa11.84□□□□□ -0.51
SGCE-205ENST00000437425 BMI1P35226 326 aa11.84□□□□□ -0.51
SGCE-205ENST00000437425 OR5I1Q13606 314 aa11.84□□□□□ -0.51
SGCE-205ENST00000437425 COX19Q49B96 90 aa11.84□□□□□ -0.51
SGCE-205ENST00000437425 GOLT1AQ6ZVE7 132 aa11.84□□□□□ -0.51
SGCE-205ENST00000437425 TMEM183AQ8IXX5 376 aa11.84□□□□□ -0.51
SGCE-205ENST00000437425 SIGLECL1Q8N7X8 197 aa11.84□□□□□ -0.51
SGCE-205ENST00000437425 TMEM160Q9NX00 188 aa11.84□□□□□ -0.51
SGCE-205ENST00000437425 ZNF492Q9P255 531 aa11.84□□□□□ -0.51
SGCE-205ENST00000437425 CSPG4Q6UVK1 2322 aa11.84□□□□□ -0.51
SGCE-205ENST00000437425 CSMD1Q96PZ7 3565 aa11.83□□□□□ -0.51
SGCE-205ENST00000437425 K7EMT4 169 aa11.83□□□□□ -0.52
SGCE-205ENST00000437425 RPL15P61313 204 aaKnown RBP11.83□□□□□ -0.52
SGCE-205ENST00000437425 PSG3Q16557 428 aa11.83□□□□□ -0.52
SGCE-205ENST00000437425 FAM106AQ4KMX7 169 aa11.83□□□□□ -0.52
SGCE-205ENST00000437425 Q86TA4 180 aa11.83□□□□□ -0.52
SGCE-205ENST00000437425 RNF152Q8N8N0 203 aa11.83□□□□□ -0.52
SGCE-205ENST00000437425 MRPL53Q96EL3 112 aaKnown RBP11.83□□□□□ -0.52
SGCE-205ENST00000437425 C17orf77Q96MU5 243 aa11.83□□□□□ -0.52
SGCE-205ENST00000437425 ZNF331Q9NQX6 463 aaPredicted RBP11.83□□□□□ -0.52
SGCE-205ENST00000437425 ITPR2Q14571 2701 aa11.83□□□□□ -0.52
SGCE-205ENST00000437425 CSMD2Q7Z408 3487 aa11.83□□□□□ -0.52
SGCE-205ENST00000437425 SLC17A3O00476 420 aa11.82□□□□□ -0.52
SGCE-205ENST00000437425 CT83Q5H943 113 aa11.82□□□□□ -0.52
SGCE-205ENST00000437425 C16orf54Q6UWD8 224 aa11.82□□□□□ -0.52
SGCE-205ENST00000437425 GPHB5Q86YW7 130 aa11.82□□□□□ -0.52
SGCE-205ENST00000437425 SMAD5-AS1Q9Y6J3 95 aa11.82□□□□□ -0.52
SGCE-205ENST00000437425 MAP1AP78559 2803 aaPredicted RBP11.81□□□□□ -0.52
SGCE-205ENST00000437425 ZNF705GA8MUZ8 300 aaPredicted RBP11.81□□□□□ -0.52
SGCE-205ENST00000437425 GATCO43716 136 aaKnown RBP11.81□□□□□ -0.52
SGCE-205ENST00000437425 SAMD13Q5VXD3 122 aa11.81□□□□□ -0.52
SGCE-205ENST00000437425 MYOZ3Q8TDC0 251 aa11.81□□□□□ -0.52
SGCE-205ENST00000437425 DAZAP1Q96EP5 407 aaKnown RBP11.81□□□□□ -0.52
SGCE-205ENST00000437425 UBE2E2Q96LR5 201 aa11.81□□□□□ -0.52
SGCE-205ENST00000437425 RNASE7Q9H1E1 156 aaKnown RBP11.81□□□□□ -0.52
SGCE-205ENST00000437425 SVEP1Q4LDE5 3571 aa11.81□□□□□ -0.52
SGCE-205ENST00000437425 SMIM27A0A1W2PRY6 76 aa11.81□□□□□ -0.52
SGCE-205ENST00000437425 ZNF320A2RRD8 509 aa11.81□□□□□ -0.52
SGCE-205ENST00000437425 RBAKDNA6NC62 111 aa11.81□□□□□ -0.52
SGCE-205ENST00000437425 IGLV2-11P01706 119 aa11.81□□□□□ -0.52
SGCE-205ENST00000437425 IGHV3-11P01762 117 aa11.81□□□□□ -0.52
SGCE-205ENST00000437425 SAPCD1Q5SSQ6 148 aa11.81□□□□□ -0.52
SGCE-205ENST00000437425 OR4B1Q8NGF8 309 aa11.81□□□□□ -0.52
SGCE-205ENST00000437425 DAZ1Q9NQZ3 744 aaKnown RBP11.81□□□□□ -0.52
SGCE-205ENST00000437425 YAE1D1Q9NRH1 226 aa11.81□□□□□ -0.52
SGCE-205ENST00000437425 PSG8Q9UQ74 426 aa11.81□□□□□ -0.52
SGCE-205ENST00000437425 UFC1Q9Y3C8 167 aa11.81□□□□□ -0.52
SGCE-205ENST00000437425 TRGC2P03986 189 aa11.8□□□□□ -0.52
SGCE-205ENST00000437425 TMEM95Q3KNT9 176 aa11.8□□□□□ -0.52
SGCE-205ENST00000437425 ZFP82Q8N141 532 aa11.8□□□□□ -0.52
SGCE-205ENST00000437425 GLMPQ8WWB7 406 aa11.8□□□□□ -0.52
SGCE-205ENST00000437425 SERTAD4Q9NUC0 356 aa11.8□□□□□ -0.52
SGCE-205ENST00000437425 IGHV3OR16-8A0A075B7F1 116 aa11.79□□□□□ -0.52
SGCE-205ENST00000437425 FAM231BA6NCW3 169 aa11.79□□□□□ -0.52
SGCE-205ENST00000437425 TRBV12-3P01733 135 aa11.79□□□□□ -0.52
SGCE-205ENST00000437425 LGALS1P09382 135 aaKnown RBP11.79□□□□□ -0.52
SGCE-205ENST00000437425 KRTAP1-1Q07627 177 aa11.79□□□□□ -0.52
SGCE-205ENST00000437425 RASL11AQ6T310 242 aa11.79□□□□□ -0.52
SGCE-205ENST00000437425 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.79□□□□□ -0.52
SGCE-205ENST00000437425 COX8CQ7Z4L0 72 aa11.79□□□□□ -0.52
SGCE-205ENST00000437425 PRNTQ86SH4 94 aa11.79□□□□□ -0.52
SGCE-205ENST00000437425 NHLRC2Q8NBF2 726 aa11.79□□□□□ -0.52
SGCE-205ENST00000437425 NUDT10Q8NFP7 164 aa11.79□□□□□ -0.52
SGCE-205ENST00000437425 NUDT11Q96G61 164 aa11.79□□□□□ -0.52
SGCE-205ENST00000437425 A8MWL6 223 aa11.78□□□□□ -0.52
SGCE-205ENST00000437425 CHEK1O14757 476 aa11.78□□□□□ -0.52
SGCE-205ENST00000437425 P01737 135 aa11.78□□□□□ -0.52
SGCE-205ENST00000437425 WDR73Q6P4I2 378 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms