RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 GIG44P09565 113 aaPredicted RBP2.93□□□□□ -1.94
HMGB3-203ENST00000430118 C8orf88P0DMB2 117 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 ZNF17P17021 662 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 NPY1RP25929 384 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 REG1BP48304 166 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 TAS2R46P59540 309 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 RHOBP62745 196 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 GRB2P62993 217 aaKnown RBP2.93□□□□□ -1.94
HMGB3-203ENST00000430118 IGLV3-21P80748 117 aaPredicted RBP2.93□□□□□ -1.94
HMGB3-203ENST00000430118 TGFBR3Q03167 851 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 Q0VG73 95 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 IL15RAQ13261 267 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 GUSBP1Q15486 140 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 ADIRFQ15847 76 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 TMEM97Q5BJF2 176 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 BVES-AS1Q5T3Y7 98 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 CYP2G1PQ6ZSU1 146 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 Q6ZT83 130 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 PRR22Q8IZ63 422 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 TTC9CQ8N5M4 171 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 ZNF709Q8N972 641 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 Q8N976 141 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 OR51G1Q8NGK1 321 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 OR13G1Q8NGZ3 307 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 OR2AE1Q8NHA4 323 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 RPS4Y2Q8TD47 263 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 BLNKQ8WV28 456 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 PP6455Q8WZ26 134 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 TMEM54Q969K7 222 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 PGLYRP3Q96LB9 341 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 DNAJC30Q96LL9 226 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 GPR21Q99679 349 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 RARRES2Q99969 163 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 RTBDNQ9BSG5 229 aaPredicted RBP2.93□□□□□ -1.94
HMGB3-203ENST00000430118 ULBP2Q9BZM5 246 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 WDR61Q9GZS3 305 aaKnown RBP2.93□□□□□ -1.94
HMGB3-203ENST00000430118 LPAR5Q9H1C0 372 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 ST20Q9HBF5 79 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 CMC2Q9NRP2 79 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 Q9UF83 564 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 CYSLTR1Q9Y271 337 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 SIGLEC9Q9Y336 463 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 SLC25A15Q9Y619 301 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 WSB1Q9Y6I7 421 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 KIAA1549Q9HCM3 1950 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 A0A087WX48 190 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 A0A1B0GX51 115 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 ODAMA1E959 279 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 RBMY1BA6NDE4 496 aaKnown RBP2.92□□□□□ -1.94
HMGB3-203ENST00000430118 RBMY1EA6NEQ0 496 aaKnown RBP2.92□□□□□ -1.94
HMGB3-203ENST00000430118 DPRXA6NFQ7 191 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 OR2T8A6NH00 312 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 TMEM212A6NML5 194 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 CD300LBA8K4G0 201 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 C4orf51C9J302 202 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 ZNF878C9JN71 531 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 E7EQL1 145 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 KRTAP4-16G5E9R7 235 aaPredicted RBP2.92□□□□□ -1.94
HMGB3-203ENST00000430118 H3BRM9 83 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 J3QLI3 93 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 M0R1B8 84 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 XRCC2O43543 280 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 GCM2O75603 506 aaPredicted RBP2.92□□□□□ -1.94
HMGB3-203ENST00000430118 IFNW1P05000 195 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 ISG15P05161 165 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 RBMY1DP0C7P1 496 aaKnown RBP2.92□□□□□ -1.94
HMGB3-203ENST00000430118 RBMY1A1P0DJD3 496 aaKnown RBP2.92□□□□□ -1.94
HMGB3-203ENST00000430118 GATA2P23769 480 aaPredicted RBP2.92□□□□□ -1.94
HMGB3-203ENST00000430118 PRTN3P24158 256 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 HINT1P49773 126 aaPredicted RBP2.92□□□□□ -1.94
HMGB3-203ENST00000430118 RPL38P63173 70 aaKnown RBP2.92□□□□□ -1.94
HMGB3-203ENST00000430118 KLRD1Q13241 179 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 OR1Q1Q15612 314 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 NNATQ16517 81 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 FAM162BQ5T6X4 162 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 CPTPQ5TA50 214 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 AMMECR1LQ6DCA0 310 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 RPL7L1Q6DKI1 246 aaKnown RBP2.92□□□□□ -1.94
HMGB3-203ENST00000430118 ZFAND6Q6FIF0 208 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 Q6ZR54 194 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 RPS27LQ71UM5 84 aaKnown RBP2.92□□□□□ -1.94
HMGB3-203ENST00000430118 LRP11Q86VZ4 500 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 SAXO1Q8IYX7 474 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 SYS1Q8N2H4 156 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 C10orf111Q8N326 155 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 ZNF439Q8NDP4 499 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 OR8S1Q8NH09 359 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 ATP6V0E2Q8NHE4 81 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 ZNF502Q8TBZ5 544 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 IL22RA2Q969J5 263 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 APOBEC3DQ96AK3 386 aaPredicted RBP2.92□□□□□ -1.94
HMGB3-203ENST00000430118 C2orf50Q96LR7 162 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 PMCHL2Q9BQD1 86 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 NDFIP1Q9BT67 221 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 SAMD10Q9BYL1 202 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 IFI27L2Q9H2X8 130 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 NPVFQ9HCQ7 196 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 DYNLRB1Q9NP97 96 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 GPR84Q9NQS5 396 aa2.92□□□□□ -1.94
HMGB3-203ENST00000430118 TVP23BQ9NYZ1 205 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms