RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 CDKN1BP46527 198 aa10.47□□□□□ -0.73
MSH5-208ENST00000429846 INPP1P49441 399 aa10.47□□□□□ -0.73
MSH5-208ENST00000429846 LCN15Q6UWW0 184 aa10.47□□□□□ -0.73
MSH5-208ENST00000429846 LINC01587Q99440 93 aa10.47□□□□□ -0.73
MSH5-208ENST00000429846 SLC50A1Q9BRV3 221 aa10.47□□□□□ -0.73
MSH5-208ENST00000429846 SRRQ9GZT4 340 aa10.47□□□□□ -0.73
MSH5-208ENST00000429846 ARL6Q9H0F7 186 aa10.47□□□□□ -0.73
MSH5-208ENST00000429846 ARV1Q9H2C2 271 aa10.47□□□□□ -0.73
MSH5-208ENST00000429846 TIMM8BQ9Y5J9 83 aaPredicted RBP10.47□□□□□ -0.73
MSH5-208ENST00000429846 CCDC160A6NGH7 325 aa10.46□□□□□ -0.73
MSH5-208ENST00000429846 CBY3A6NI87 242 aa10.46□□□□□ -0.73
MSH5-208ENST00000429846 PRM2P04554 102 aa10.46□□□□□ -0.73
MSH5-208ENST00000429846 OR4E1P0C645 316 aa10.46□□□□□ -0.73
MSH5-208ENST00000429846 METTL15P1P0C7V9 234 aa10.46□□□□□ -0.73
MSH5-208ENST00000429846 TAS2R30P59541 319 aa10.46□□□□□ -0.73
MSH5-208ENST00000429846 RRAS2P62070 204 aaPredicted RBP10.46□□□□□ -0.73
MSH5-208ENST00000429846 ZNF493Q6ZR52 646 aa10.46□□□□□ -0.73
MSH5-208ENST00000429846 ZNF546Q86UE3 836 aa10.46□□□□□ -0.73
MSH5-208ENST00000429846 C20orf144Q9BQM9 153 aa10.46□□□□□ -0.73
MSH5-208ENST00000429846 NBDYA0A0U1RRE5 68 aa10.45□□□□□ -0.74
MSH5-208ENST00000429846 MRPS12O15235 138 aaKnown RBP10.45□□□□□ -0.74
MSH5-208ENST00000429846 ANXA7P20073 488 aaKnown RBP10.45□□□□□ -0.74
MSH5-208ENST00000429846 AZU1P20160 251 aa10.45□□□□□ -0.74
MSH5-208ENST00000429846 CCL18P55774 89 aa10.45□□□□□ -0.74
MSH5-208ENST00000429846 TRIQKQ629K1 86 aa10.45□□□□□ -0.74
MSH5-208ENST00000429846 ZNF575Q86XF7 245 aa10.45□□□□□ -0.74
MSH5-208ENST00000429846 ZNRF2Q8NHG8 242 aa10.45□□□□□ -0.74
MSH5-208ENST00000429846 TMEM263Q8WUH6 116 aaKnown RBP10.45□□□□□ -0.74
MSH5-208ENST00000429846 RPUSD4Q96CM3 377 aaKnown RBP10.45□□□□□ -0.74
MSH5-208ENST00000429846 GGACTQ9BVM4 153 aa10.45□□□□□ -0.74
MSH5-208ENST00000429846 ZNF331Q9NQX6 463 aaPredicted RBP10.45□□□□□ -0.74
MSH5-208ENST00000429846 PKD1P98161 4303 aa10.45□□□□□ -0.74
MSH5-208ENST00000429846 H7BYZ3 331 aa10.44□□□□□ -0.74
MSH5-208ENST00000429846 GOSR2O14653 212 aa10.44□□□□□ -0.74
MSH5-208ENST00000429846 CCNKO75909 580 aa10.44□□□□□ -0.74
MSH5-208ENST00000429846 SCGB1D2O95969 90 aa10.44□□□□□ -0.74
MSH5-208ENST00000429846 NUDT3O95989 172 aa10.44□□□□□ -0.74
MSH5-208ENST00000429846 SLC38A11Q08AI6 406 aa10.44□□□□□ -0.74
MSH5-208ENST00000429846 IAH1Q2TAA2 248 aaPredicted RBP10.44□□□□□ -0.74
MSH5-208ENST00000429846 C4orf46Q504U0 113 aa10.44□□□□□ -0.74
MSH5-208ENST00000429846 PATE2Q6UY27 113 aa10.44□□□□□ -0.74
MSH5-208ENST00000429846 BPIFA4PQ86YQ2 179 aa10.44□□□□□ -0.74
MSH5-208ENST00000429846 OR10J6PQ8NGY7 276 aa10.44□□□□□ -0.74
MSH5-208ENST00000429846 RNASE8Q8TDE3 154 aaKnown RBP10.44□□□□□ -0.74
MSH5-208ENST00000429846 RCL1Q9Y2P8 373 aaKnown RBP10.44□□□□□ -0.74
MSH5-208ENST00000429846 DNAH11Q96DT5 4516 aa10.44□□□□□ -0.74
MSH5-208ENST00000429846 CENPXA8MT69 81 aa10.43□□□□□ -0.74
MSH5-208ENST00000429846 ZNF701M0R085 212 aaPredicted RBP10.43□□□□□ -0.74
MSH5-208ENST00000429846 LINC00305Q7Z4B0 112 aa10.43□□□□□ -0.74
MSH5-208ENST00000429846 C6orf223Q8N319 242 aa10.43□□□□□ -0.74
MSH5-208ENST00000429846 FLVCR2Q9UPI3 526 aa10.43□□□□□ -0.74
MSH5-208ENST00000429846 AGPAT2O15120 278 aa10.42□□□□□ -0.74
MSH5-208ENST00000429846 HTN1P15515 57 aa10.42□□□□□ -0.74
MSH5-208ENST00000429846 FCN2Q15485 313 aa10.42□□□□□ -0.74
MSH5-208ENST00000429846 BAK1Q16611 211 aa10.42□□□□□ -0.74
MSH5-208ENST00000429846 CNPY1Q3B7I2 92 aa10.42□□□□□ -0.74
MSH5-208ENST00000429846 ZBTB8BQ8NAP8 495 aaPredicted RBP10.42□□□□□ -0.74
MSH5-208ENST00000429846 MITD1Q8WV92 249 aa10.42□□□□□ -0.74
MSH5-208ENST00000429846 RNF141Q8WVD5 230 aa10.42□□□□□ -0.74
MSH5-208ENST00000429846 RBM38Q9H0Z9 239 aaKnown RBP10.42□□□□□ -0.74
MSH5-208ENST00000429846 COX7A2P2O60397 106 aa10.41□□□□□ -0.74
MSH5-208ENST00000429846 BTCP35070 178 aa10.41□□□□□ -0.74
MSH5-208ENST00000429846 TNP2Q05952 138 aa10.41□□□□□ -0.74
MSH5-208ENST00000429846 CLINT1Q14677 625 aa10.41□□□□□ -0.74
MSH5-208ENST00000429846 ZNF503Q96F45 646 aa10.41□□□□□ -0.74
MSH5-208ENST00000429846 NOP10Q9NPE3 64 aaKnown RBP10.41□□□□□ -0.74
MSH5-208ENST00000429846 GSKIPQ9P0R6 139 aa10.41□□□□□ -0.74
MSH5-208ENST00000429846 LINC00588Q9Y4M8 146 aa10.41□□□□□ -0.74
MSH5-208ENST00000429846 PXMP4Q9Y6I8 212 aa10.41□□□□□ -0.74
MSH5-208ENST00000429846 C7orf66A4D0T2 115 aa10.4□□□□□ -0.74
MSH5-208ENST00000429846 C10orf113Q5VZT2 155 aa10.4□□□□□ -0.74
MSH5-208ENST00000429846 CCDC28AQ8IWP9 274 aa10.4□□□□□ -0.74
MSH5-208ENST00000429846 LINC00612Q8N6U2 182 aa10.4□□□□□ -0.74
MSH5-208ENST00000429846 C16orf90A8MZG2 172 aa10.39□□□□□ -0.75
MSH5-208ENST00000429846 CDK2AP2O75956 126 aa10.39□□□□□ -0.75
MSH5-208ENST00000429846 MBPP02686 304 aaPredicted RBP10.39□□□□□ -0.75
MSH5-208ENST00000429846 IGLC2P0DOY2 106 aa10.39□□□□□ -0.75
MSH5-208ENST00000429846 M6PRP20645 277 aa10.39□□□□□ -0.75
MSH5-208ENST00000429846 ARL16Q0P5N6 197 aa10.39□□□□□ -0.75
MSH5-208ENST00000429846 RAB31Q13636 194 aa10.39□□□□□ -0.75
MSH5-208ENST00000429846 GUK1Q16774 197 aa10.39□□□□□ -0.75
MSH5-208ENST00000429846 TTC32Q5I0X7 151 aa10.39□□□□□ -0.75
MSH5-208ENST00000429846 SSX7Q7RTT5 188 aa10.39□□□□□ -0.75
MSH5-208ENST00000429846 TMEM37Q8WXS4 190 aa10.39□□□□□ -0.75
MSH5-208ENST00000429846 GNPNAT1Q96EK6 184 aaPredicted RBP10.39□□□□□ -0.75
MSH5-208ENST00000429846 ODF3Q96PU9 254 aa10.39□□□□□ -0.75
MSH5-208ENST00000429846 MGST2Q99735 147 aa10.39□□□□□ -0.75
MSH5-208ENST00000429846 RYR1P21817 5038 aa10.39□□□□□ -0.75
MSH5-208ENST00000429846 DYNC1H1Q14204 4646 aaKnown RBP10.38□□□□□ -0.75
MSH5-208ENST00000429846 H3BNG1 76 aa10.38□□□□□ -0.75
MSH5-208ENST00000429846 L7N2F9 121 aa10.38□□□□□ -0.75
MSH5-208ENST00000429846 SLC17A3O00476 420 aa10.38□□□□□ -0.75
MSH5-208ENST00000429846 RLN2P04090 185 aa10.38□□□□□ -0.75
MSH5-208ENST00000429846 CAMLGP49069 296 aa10.38□□□□□ -0.75
MSH5-208ENST00000429846 VAMP2P63027 116 aa10.38□□□□□ -0.75
MSH5-208ENST00000429846 ZNF846Q147U1 533 aa10.38□□□□□ -0.75
MSH5-208ENST00000429846 OPCMLQ14982 345 aa10.38□□□□□ -0.75
MSH5-208ENST00000429846 GFI1BQ5VTD9 330 aa10.38□□□□□ -0.75
MSH5-208ENST00000429846 Q6ZRG5 221 aa10.38□□□□□ -0.75
MSH5-208ENST00000429846 RXFP4Q8TDU9 374 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms