RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 HIVEP2P31629 2446 aa6.6□□□□□ -1.35
CD44-208ENST00000428726 TENM4Q6N022 2769 aa6.6□□□□□ -1.35
CD44-208ENST00000428726 FLNBO75369 2602 aaKnown RBP6.6□□□□□ -1.35
CD44-208ENST00000428726 A0A1W2PS18 150 aa6.6□□□□□ -1.35
CD44-208ENST00000428726 RPLP1P05386 114 aaKnown RBP6.6□□□□□ -1.35
CD44-208ENST00000428726 SAA4P35542 130 aa6.6□□□□□ -1.35
CD44-208ENST00000428726 BPIFB3P59826 476 aa6.6□□□□□ -1.35
CD44-208ENST00000428726 TMEM95Q3KNT9 176 aa6.6□□□□□ -1.35
CD44-208ENST00000428726 UNQ5815/PRO19632Q6UWF5 114 aa6.6□□□□□ -1.35
CD44-208ENST00000428726 Q6ZS46 218 aa6.6□□□□□ -1.35
CD44-208ENST00000428726 RNF182Q8N6D2 247 aa6.6□□□□□ -1.35
CD44-208ENST00000428726 STPG4Q8N801 248 aa6.6□□□□□ -1.35
CD44-208ENST00000428726 NUDT10Q8NFP7 164 aa6.6□□□□□ -1.35
CD44-208ENST00000428726 NUDT11Q96G61 164 aa6.6□□□□□ -1.35
CD44-208ENST00000428726 CHRDL1Q9BU40 450 aa6.6□□□□□ -1.35
CD44-208ENST00000428726 Q9H3A6 140 aa6.6□□□□□ -1.35
CD44-208ENST00000428726 AKAP9Q99996 3911 aa6.6□□□□□ -1.35
CD44-208ENST00000428726 TRAV40A0A0B4J280 105 aa6.6□□□□□ -1.35
CD44-208ENST00000428726 PEX7O00628 323 aa6.6□□□□□ -1.35
CD44-208ENST00000428726 IGKV1-17P01599 117 aa6.6□□□□□ -1.35
CD44-208ENST00000428726 IGLV2-8P01709 118 aa6.6□□□□□ -1.35
CD44-208ENST00000428726 TMEM183BQ1AE95 376 aa6.6□□□□□ -1.35
CD44-208ENST00000428726 ZNF329Q86UD4 541 aa6.6□□□□□ -1.35
CD44-208ENST00000428726 BEND2Q8NDZ0 799 aa6.6□□□□□ -1.35
CD44-208ENST00000428726 ZNF586Q9NXT0 402 aa6.6□□□□□ -1.35
CD44-208ENST00000428726 IGKV2-40A0A087WW87 121 aaPredicted RBP6.59□□□□□ -1.35
CD44-208ENST00000428726 HIGD1CA8MV81 97 aa6.59□□□□□ -1.35
CD44-208ENST00000428726 NBR2O15453 112 aa6.59□□□□□ -1.35
CD44-208ENST00000428726 IGKV2D-40P01614 121 aaPredicted RBP6.59□□□□□ -1.35
CD44-208ENST00000428726 C3orf79P0CE67 100 aa6.59□□□□□ -1.35
CD44-208ENST00000428726 RAB4AP20338 218 aa6.59□□□□□ -1.35
CD44-208ENST00000428726 BRS3P32247 399 aa6.59□□□□□ -1.35
CD44-208ENST00000428726 YPEL3P61236 119 aaPredicted RBP6.59□□□□□ -1.35
CD44-208ENST00000428726 PVRIGQ6DKI7 326 aa6.59□□□□□ -1.35
CD44-208ENST00000428726 LINC00173Q6ZV60 143 aa6.59□□□□□ -1.35
CD44-208ENST00000428726 CDC42EP3Q9UKI2 254 aa6.59□□□□□ -1.35
CD44-208ENST00000428726 BMPR1BO00238 502 aa6.59□□□□□ -1.35
CD44-208ENST00000428726 GPX1P07203 203 aa6.59□□□□□ -1.35
CD44-208ENST00000428726 CRYGBP07316 175 aa6.59□□□□□ -1.35
CD44-208ENST00000428726 GDF5OSQ5U4N7 250 aa6.59□□□□□ -1.35
CD44-208ENST00000428726 C8orf46Q8TAG6 207 aa6.59□□□□□ -1.35
CD44-208ENST00000428726 C8orf49Q96NF6 230 aa6.59□□□□□ -1.35
CD44-208ENST00000428726 CRYGCP07315 174 aa6.58□□□□□ -1.36
CD44-208ENST00000428726 CLEC19AQ6UXS0 136 aa6.58□□□□□ -1.36
CD44-208ENST00000428726 WFDC3Q8IUB2 231 aa6.58□□□□□ -1.36
CD44-208ENST00000428726 ITLN2Q8WWU7 325 aaPredicted RBP6.58□□□□□ -1.36
CD44-208ENST00000428726 SLC25A39Q9BZJ4 359 aaPredicted RBP6.58□□□□□ -1.36
CD44-208ENST00000428726 F11RQ9Y624 299 aaKnown RBP6.58□□□□□ -1.36
CD44-208ENST00000428726 GCN1Q92616 2671 aaKnown RBP6.58□□□□□ -1.36
CD44-208ENST00000428726 IGHV4-61A0A0C4DH41 118 aa6.58□□□□□ -1.36
CD44-208ENST00000428726 K7EIM0 57 aa6.58□□□□□ -1.36
CD44-208ENST00000428726 HSBP1O75506 76 aa6.58□□□□□ -1.36
CD44-208ENST00000428726 APCSP02743 223 aa6.58□□□□□ -1.36
CD44-208ENST00000428726 APOHP02749 345 aaPredicted RBP6.58□□□□□ -1.36
CD44-208ENST00000428726 IGLC1P0CG04 106 aa6.58□□□□□ -1.36
CD44-208ENST00000428726 RPL11P62913 178 aaKnown RBP6.58□□□□□ -1.36
CD44-208ENST00000428726 RNF151Q2KHN1 245 aa6.58□□□□□ -1.36
CD44-208ENST00000428726 RNF5Q99942 180 aa6.58□□□□□ -1.36
CD44-208ENST00000428726 MIEN1Q9BRT3 115 aa6.58□□□□□ -1.36
CD44-208ENST00000428726 ZNF331Q9NQX6 463 aaPredicted RBP6.58□□□□□ -1.36
CD44-208ENST00000428726 OSTCQ9NRP0 149 aa6.58□□□□□ -1.36
CD44-208ENST00000428726 HIGD1AQ9Y241 93 aa6.58□□□□□ -1.36
CD44-208ENST00000428726 AGRNO00468 2067 aa6.58□□□□□ -1.36
CD44-208ENST00000428726 DLEU1O43261 78 aa6.58□□□□□ -1.36
CD44-208ENST00000428726 CLEC3BP05452 202 aa6.58□□□□□ -1.36
CD44-208ENST00000428726 IGHV4-38-2P0DP08 117 aa6.58□□□□□ -1.36
CD44-208ENST00000428726 PAX1P15863 534 aa6.58□□□□□ -1.36
CD44-208ENST00000428726 S100A7P31151 101 aa6.58□□□□□ -1.36
CD44-208ENST00000428726 ERCC8Q13216 396 aa6.58□□□□□ -1.36
CD44-208ENST00000428726 TMEM136Q6ZRR5 245 aa6.58□□□□□ -1.36
CD44-208ENST00000428726 STXBP6Q8NFX7 210 aa6.58□□□□□ -1.36
CD44-208ENST00000428726 BORCS7Q96B45 105 aa6.58□□□□□ -1.36
CD44-208ENST00000428726 TRGV9Q99603 122 aa6.58□□□□□ -1.36
CD44-208ENST00000428726 NBEAL2Q6ZNJ1 2754 aa6.57□□□□□ -1.36
CD44-208ENST00000428726 UBR5O95071 2799 aaPredicted RBP6.57□□□□□ -1.36
CD44-208ENST00000428726 KIR2DL5BA0A0G2JN68 375 aa6.57□□□□□ -1.36
CD44-208ENST00000428726 KIR2DL5BA0A0G2JPC4 375 aa6.57□□□□□ -1.36
CD44-208ENST00000428726 LOC389332A0A1B0GUA5 103 aa6.57□□□□□ -1.36
CD44-208ENST00000428726 SERTM2A0A1B0GWG4 89 aa6.57□□□□□ -1.36
CD44-208ENST00000428726 M0R2Z0 102 aa6.57□□□□□ -1.36
CD44-208ENST00000428726 ATP6V0E1O15342 81 aa6.57□□□□□ -1.36
CD44-208ENST00000428726 EDN2P20800 178 aa6.57□□□□□ -1.36
CD44-208ENST00000428726 HNRNPA3P51991 378 aaKnown RBP6.57□□□□□ -1.36
CD44-208ENST00000428726 PAX2Q02962 417 aa6.57□□□□□ -1.36
CD44-208ENST00000428726 C10orf99Q6UWK7 81 aa6.57□□□□□ -1.36
CD44-208ENST00000428726 KIR2DL5AQ8N109 375 aa6.57□□□□□ -1.36
CD44-208ENST00000428726 NUP35Q8NFH5 326 aa6.57□□□□□ -1.36
CD44-208ENST00000428726 TSKUQ8WUA8 353 aa6.57□□□□□ -1.36
CD44-208ENST00000428726 EPDR1Q9UM22 224 aa6.57□□□□□ -1.36
CD44-208ENST00000428726 IGHV4-39P01824 125 aa6.57□□□□□ -1.36
CD44-208ENST00000428726 HOXB4P17483 251 aaPredicted RBP6.57□□□□□ -1.36
CD44-208ENST00000428726 ATP5J2P56134 94 aa6.57□□□□□ -1.36
CD44-208ENST00000428726 C5orf64Q2M2E5 130 aa6.57□□□□□ -1.36
CD44-208ENST00000428726 SPATA12Q7Z6I5 190 aa6.57□□□□□ -1.36
CD44-208ENST00000428726 TMEM116Q8NCL8 245 aa6.57□□□□□ -1.36
CD44-208ENST00000428726 LY6G5BQ8NDX9 201 aa6.57□□□□□ -1.36
CD44-208ENST00000428726 GLMPQ8WWB7 406 aa6.57□□□□□ -1.36
CD44-208ENST00000428726 TRBV9A0A0B4J1U6 114 aa6.56□□□□□ -1.36
CD44-208ENST00000428726 hDV102S1A0JD36 115 aa6.56□□□□□ -1.36
CD44-208ENST00000428726 I3L2K1 104 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms