RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 TCTE3Q8IZS6 198 aa10.77□□□□□ -0.68
SGCE-204ENST00000428696 ZNF738Q8NE65 137 aa10.77□□□□□ -0.68
SGCE-204ENST00000428696 OR2G3Q8NGZ4 309 aa10.77□□□□□ -0.68
SGCE-204ENST00000428696 GNPNAT1Q96EK6 184 aaPredicted RBP10.77□□□□□ -0.68
SGCE-204ENST00000428696 RPRMQ9NS64 109 aa10.77□□□□□ -0.68
SGCE-204ENST00000428696 FUT9Q9Y231 359 aa10.77□□□□□ -0.68
SGCE-204ENST00000428696 OR10J4P0C629 311 aa10.76□□□□□ -0.69
SGCE-204ENST00000428696 NHLRC4P0CG21 123 aaPredicted RBP10.76□□□□□ -0.69
SGCE-204ENST00000428696 M6PRP20645 277 aa10.76□□□□□ -0.69
SGCE-204ENST00000428696 HLA-DMBP28068 263 aa10.76□□□□□ -0.69
SGCE-204ENST00000428696 EBLN2Q6P2I7 272 aa10.76□□□□□ -0.69
SGCE-204ENST00000428696 TMUB2Q71RG4 321 aa10.76□□□□□ -0.69
SGCE-204ENST00000428696 OR4B1Q8NGF8 309 aa10.76□□□□□ -0.69
SGCE-204ENST00000428696 C20orf173Q96LM9 149 aa10.76□□□□□ -0.69
SGCE-204ENST00000428696 PAXXQ9BUH6 204 aa10.76□□□□□ -0.69
SGCE-204ENST00000428696 ZNF471Q9BX82 626 aaPredicted RBP10.76□□□□□ -0.69
SGCE-204ENST00000428696 SLC25A2Q9BXI2 301 aa10.76□□□□□ -0.69
SGCE-204ENST00000428696 MRPL32Q9BYC8 188 aaKnown RBP10.76□□□□□ -0.69
SGCE-204ENST00000428696 TGP01266 2768 aa10.76□□□□□ -0.69
SGCE-204ENST00000428696 F6UB75 175 aa10.75□□□□□ -0.69
SGCE-204ENST00000428696 SOCS3O14543 225 aa10.75□□□□□ -0.69
SGCE-204ENST00000428696 TAS2R45P59539 299 aa10.75□□□□□ -0.69
SGCE-204ENST00000428696 CD300CQ08708 224 aa10.75□□□□□ -0.69
SGCE-204ENST00000428696 OR51M1Q9H341 326 aa10.75□□□□□ -0.69
SGCE-204ENST00000428696 HRH4Q9H3N8 390 aa10.75□□□□□ -0.69
SGCE-204ENST00000428696 RETNQ9HD89 108 aa10.75□□□□□ -0.69
SGCE-204ENST00000428696 ZNF586Q9NXT0 402 aa10.75□□□□□ -0.69
SGCE-204ENST00000428696 A0A087X0K7 114 aa10.75□□□□□ -0.69
SGCE-204ENST00000428696 TRAV8-2A0A0B4J237 113 aa10.75□□□□□ -0.69
SGCE-204ENST00000428696 MRPS12O15235 138 aaKnown RBP10.75□□□□□ -0.69
SGCE-204ENST00000428696 MBP02144 154 aa10.75□□□□□ -0.69
SGCE-204ENST00000428696 ZNF705DP0CH99 300 aaPredicted RBP10.75□□□□□ -0.69
SGCE-204ENST00000428696 ZNF705BP0CI00 300 aaPredicted RBP10.75□□□□□ -0.69
SGCE-204ENST00000428696 HIST1H1EP10412 219 aaKnown RBP10.75□□□□□ -0.69
SGCE-204ENST00000428696 ZNF345Q14585 488 aa10.75□□□□□ -0.69
SGCE-204ENST00000428696 GUK1Q16774 197 aa10.75□□□□□ -0.69
SGCE-204ENST00000428696 ZFP69Q49AA0 526 aa10.75□□□□□ -0.69
SGCE-204ENST00000428696 LCN15Q6UWW0 184 aa10.75□□□□□ -0.69
SGCE-204ENST00000428696 LINC00322Q6ZN03 302 aaPredicted RBP10.75□□□□□ -0.69
SGCE-204ENST00000428696 RNF141Q8WVD5 230 aa10.75□□□□□ -0.69
SGCE-204ENST00000428696 PSMG3Q9BT73 122 aaPredicted RBP10.75□□□□□ -0.69
SGCE-204ENST00000428696 CSTL1Q9H114 145 aa10.75□□□□□ -0.69
SGCE-204ENST00000428696 CYTL1Q9NRR1 136 aa10.75□□□□□ -0.69
SGCE-204ENST00000428696 BCL2L11O43521 198 aa10.74□□□□□ -0.69
SGCE-204ENST00000428696 CA1P00915 261 aaPredicted RBP10.74□□□□□ -0.69
SGCE-204ENST00000428696 C1QBP02746 253 aa10.74□□□□□ -0.69
SGCE-204ENST00000428696 IGLC2P0DOY2 106 aa10.74□□□□□ -0.69
SGCE-204ENST00000428696 SPP1P10451 314 aa10.74□□□□□ -0.69
SGCE-204ENST00000428696 SERF2P84101 59 aa10.74□□□□□ -0.69
SGCE-204ENST00000428696 PSG3Q16557 428 aa10.74□□□□□ -0.69
SGCE-204ENST00000428696 AKR1C8PQ5T2L2 129 aa10.74□□□□□ -0.69
SGCE-204ENST00000428696 GDF5OSQ5U4N7 250 aa10.74□□□□□ -0.69
SGCE-204ENST00000428696 IQCF2Q8IXL9 164 aa10.74□□□□□ -0.69
SGCE-204ENST00000428696 FAM167A-AS1Q96KT0 104 aa10.74□□□□□ -0.69
SGCE-204ENST00000428696 TMEM14CQ9P0S9 112 aa10.74□□□□□ -0.69
SGCE-204ENST00000428696 ZNF705FA8MVS1 300 aaPredicted RBP10.73□□□□□ -0.69
SGCE-204ENST00000428696 SLC17A3O00476 420 aa10.73□□□□□ -0.69
SGCE-204ENST00000428696 NBEAP1P0C6P0 100 aa10.73□□□□□ -0.69
SGCE-204ENST00000428696 FXYD7P58549 80 aa10.73□□□□□ -0.69
SGCE-204ENST00000428696 UBE2L3P68036 154 aaKnown RBP10.73□□□□□ -0.69
SGCE-204ENST00000428696 LGALSLQ3ZCW2 172 aaPredicted RBP10.73□□□□□ -0.69
SGCE-204ENST00000428696 KHDC3LQ587J8 217 aa10.73□□□□□ -0.69
SGCE-204ENST00000428696 TMEM41BQ5BJD5 291 aa10.73□□□□□ -0.69
SGCE-204ENST00000428696 RPUSD4Q96CM3 377 aaKnown RBP10.73□□□□□ -0.69
SGCE-204ENST00000428696 HYLS1Q96M11 299 aa10.73□□□□□ -0.69
SGCE-204ENST00000428696 SPATA25Q9BR10 227 aa10.73□□□□□ -0.69
SGCE-204ENST00000428696 SLC50A1Q9BRV3 221 aa10.73□□□□□ -0.69
SGCE-204ENST00000428696 ACTR3CQ9C0K3 210 aaPredicted RBP10.73□□□□□ -0.69
SGCE-204ENST00000428696 SAV1Q9H4B6 383 aaPredicted RBP10.73□□□□□ -0.69
SGCE-204ENST00000428696 ZNF331Q9NQX6 463 aaPredicted RBP10.73□□□□□ -0.69
SGCE-204ENST00000428696 PPP1R14DQ9NXH3 145 aa10.73□□□□□ -0.69
SGCE-204ENST00000428696 NBEAL2Q6ZNJ1 2754 aa10.73□□□□□ -0.69
SGCE-204ENST00000428696 TRBV19A0A075B6N1 114 aa10.72□□□□□ -0.69
SGCE-204ENST00000428696 H3BMM0 161 aa10.72□□□□□ -0.69
SGCE-204ENST00000428696 CDC34P49427 236 aaPredicted RBP10.72□□□□□ -0.69
SGCE-204ENST00000428696 DEFB135Q30KP9 77 aa10.72□□□□□ -0.69
SGCE-204ENST00000428696 FOXI2Q6ZQN5 318 aa10.72□□□□□ -0.69
SGCE-204ENST00000428696 RAB24Q969Q5 203 aa10.72□□□□□ -0.69
SGCE-204ENST00000428696 U3KQK5 164 aa10.72□□□□□ -0.69
SGCE-204ENST00000428696 KIR2DL5BA0A0G2JN68 375 aa10.71□□□□□ -0.69
SGCE-204ENST00000428696 KIR2DL5BA0A0G2JPC4 375 aa10.71□□□□□ -0.69
SGCE-204ENST00000428696 UBE2CO00762 179 aa10.71□□□□□ -0.69
SGCE-204ENST00000428696 NUTF2P61970 127 aaKnown RBP10.71□□□□□ -0.69
SGCE-204ENST00000428696 RANP62826 216 aaKnown RBP10.71□□□□□ -0.69
SGCE-204ENST00000428696 EIF5AP63241 154 aaKnown RBP10.71□□□□□ -0.69
SGCE-204ENST00000428696 PSG9Q00887 426 aa10.71□□□□□ -0.69
SGCE-204ENST00000428696 HIST1H1AQ02539 215 aaPredicted RBP10.71□□□□□ -0.69
SGCE-204ENST00000428696 TRPT1Q86TN4 253 aaKnown RBP10.71□□□□□ -0.69
SGCE-204ENST00000428696 KIR2DL5AQ8N109 375 aa10.71□□□□□ -0.69
SGCE-204ENST00000428696 EXOC3-AS1Q8N2X6 119 aa10.71□□□□□ -0.69
SGCE-204ENST00000428696 RPP25LQ8N5L8 163 aaKnown RBP10.71□□□□□ -0.69
SGCE-204ENST00000428696 KIR2DL5BQ8NHK3 375 aa10.71□□□□□ -0.69
SGCE-204ENST00000428696 SAT2Q96F10 170 aaPredicted RBP10.71□□□□□ -0.69
SGCE-204ENST00000428696 RCHY1Q96PM5 261 aa10.71□□□□□ -0.69
SGCE-204ENST00000428696 TM2D3Q9BRN9 247 aa10.71□□□□□ -0.69
SGCE-204ENST00000428696 AAMDCQ9H7C9 122 aa10.71□□□□□ -0.69
SGCE-204ENST00000428696 HLA-DRB4P13762 266 aa10.7□□□□□ -0.7
SGCE-204ENST00000428696 ICAM4Q14773 271 aa10.7□□□□□ -0.7
SGCE-204ENST00000428696 FXYD5Q96DB9 178 aa10.7□□□□□ -0.7
SGCE-204ENST00000428696 CLEC5AQ9NY25 188 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms