RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 SCRT1Q9BWW7 348 aa6.29□□□□□ -1.4
SMARCAL1-206ENST00000427645 TMPRSS5Q9H3S3 457 aa6.29□□□□□ -1.4
SMARCAL1-206ENST00000427645 CLEC5AQ9NY25 188 aa6.29□□□□□ -1.4
SMARCAL1-206ENST00000427645 IGHV3OR16-8A0A075B7F1 116 aa6.28□□□□□ -1.4
SMARCAL1-206ENST00000427645 LOC102723971A0A1B0GUV8 181 aa6.28□□□□□ -1.4
SMARCAL1-206ENST00000427645 ZNF785A8K8V0 405 aa6.28□□□□□ -1.4
SMARCAL1-206ENST00000427645 ZNF207O43670 478 aaKnown RBP6.28□□□□□ -1.4
SMARCAL1-206ENST00000427645 PDE6DO43924 150 aa6.28□□□□□ -1.4
SMARCAL1-206ENST00000427645 PAGE4O60829 102 aa6.28□□□□□ -1.4
SMARCAL1-206ENST00000427645 ZNF253O75346 499 aa6.28□□□□□ -1.4
SMARCAL1-206ENST00000427645 EIF3GO75821 320 aaKnown RBP eCLIP6.28□□□□□ -1.4
SMARCAL1-206ENST00000427645 OR10J4P0C629 311 aa6.28□□□□□ -1.4
SMARCAL1-206ENST00000427645 PYYP10082 97 aa6.28□□□□□ -1.4
SMARCAL1-206ENST00000427645 BCL2P10415 239 aa6.28□□□□□ -1.4
SMARCAL1-206ENST00000427645 GP9P14770 177 aa6.28□□□□□ -1.4
SMARCAL1-206ENST00000427645 ATF4P18848 351 aaPredicted RBP6.28□□□□□ -1.4
SMARCAL1-206ENST00000427645 CBLN1P23435 193 aa6.28□□□□□ -1.4
SMARCAL1-206ENST00000427645 MEF2BQ02080 365 aaPredicted RBP6.28□□□□□ -1.4
SMARCAL1-206ENST00000427645 FHL3Q13643 280 aa6.28□□□□□ -1.4
SMARCAL1-206ENST00000427645 HAGHQ16775 308 aa6.28□□□□□ -1.4
SMARCAL1-206ENST00000427645 TM4SF20Q53R12 229 aa6.28□□□□□ -1.4
SMARCAL1-206ENST00000427645 SAMD13Q5VXD3 122 aa6.28□□□□□ -1.4
SMARCAL1-206ENST00000427645 CST9LP1Q5W188 147 aa6.28□□□□□ -1.4
SMARCAL1-206ENST00000427645 LEMD1Q68G75 181 aa6.28□□□□□ -1.4
SMARCAL1-206ENST00000427645 C18orf65Q6ZTR6 163 aa6.28□□□□□ -1.4
SMARCAL1-206ENST00000427645 ARL6IP6Q8N6S5 226 aa6.28□□□□□ -1.4
SMARCAL1-206ENST00000427645 OR9G4Q8NGQ1 327 aa6.28□□□□□ -1.4
SMARCAL1-206ENST00000427645 RAX2Q96IS3 184 aa6.28□□□□□ -1.4
SMARCAL1-206ENST00000427645 TCEAL7Q9BRU2 100 aa6.28□□□□□ -1.4
SMARCAL1-206ENST00000427645 RHPN1-AS1Q9BWJ2 59 aa6.28□□□□□ -1.4
SMARCAL1-206ENST00000427645 TREM1Q9NP99 234 aa6.28□□□□□ -1.4
SMARCAL1-206ENST00000427645 TRBV19A0A075B6N1 114 aa6.27□□□□□ -1.41
SMARCAL1-206ENST00000427645 A0A087X0K7 114 aa6.27□□□□□ -1.41
SMARCAL1-206ENST00000427645 A0A1W2PRX2 142 aa6.27□□□□□ -1.41
SMARCAL1-206ENST00000427645 FAM74A7A6NL05 159 aa6.27□□□□□ -1.41
SMARCAL1-206ENST00000427645 F6UZH7 168 aa6.27□□□□□ -1.41
SMARCAL1-206ENST00000427645 CHEK1O14757 476 aa6.27□□□□□ -1.41
SMARCAL1-206ENST00000427645 MRPS12O15235 138 aaKnown RBP6.27□□□□□ -1.41
SMARCAL1-206ENST00000427645 APOHP02749 345 aaPredicted RBP6.27□□□□□ -1.41
SMARCAL1-206ENST00000427645 IGLC2P0DOY2 106 aa6.27□□□□□ -1.41
SMARCAL1-206ENST00000427645 SLURP1P55000 103 aa6.27□□□□□ -1.41
SMARCAL1-206ENST00000427645 RANP62826 216 aaKnown RBP6.27□□□□□ -1.41
SMARCAL1-206ENST00000427645 ICAM4Q14773 271 aa6.27□□□□□ -1.41
SMARCAL1-206ENST00000427645 DEFB136Q30KP8 78 aa6.27□□□□□ -1.41
SMARCAL1-206ENST00000427645 NSUN5P1Q3KNT7 163 aa6.27□□□□□ -1.41
SMARCAL1-206ENST00000427645 TOR2AQ5JU69 321 aa6.27□□□□□ -1.41
SMARCAL1-206ENST00000427645 SIGLEC15Q6ZMC9 328 aa6.27□□□□□ -1.41
SMARCAL1-206ENST00000427645 BLNKQ8WV28 456 aa6.27□□□□□ -1.41
SMARCAL1-206ENST00000427645 GLMPQ8WWB7 406 aa6.27□□□□□ -1.41
SMARCAL1-206ENST00000427645 DLX4Q92988 240 aaPredicted RBP6.27□□□□□ -1.41
SMARCAL1-206ENST00000427645 RARRES2Q99969 163 aa6.27□□□□□ -1.41
SMARCAL1-206ENST00000427645 AAMDCQ9H7C9 122 aa6.27□□□□□ -1.41
SMARCAL1-206ENST00000427645 ZNF586Q9NXT0 402 aa6.27□□□□□ -1.41
SMARCAL1-206ENST00000427645 SIGLEC8Q9NYZ4 499 aa6.27□□□□□ -1.41
SMARCAL1-206ENST00000427645 NBEAL2Q6ZNJ1 2754 aa6.27□□□□□ -1.41
SMARCAL1-206ENST00000427645 DNAH9Q9NYC9 4486 aa6.27□□□□□ -1.41
SMARCAL1-206ENST00000427645 TMEM213A2RRL7 107 aa6.26□□□□□ -1.41
SMARCAL1-206ENST00000427645 PGPA6NDG6 321 aa6.26□□□□□ -1.41
SMARCAL1-206ENST00000427645 C2orf70A6NJV1 201 aa6.26□□□□□ -1.41
SMARCAL1-206ENST00000427645 KRBOX1C9JBD0 128 aa6.26□□□□□ -1.41
SMARCAL1-206ENST00000427645 C11orf94C9JXX5 98 aa6.26□□□□□ -1.41
SMARCAL1-206ENST00000427645 TMEM250H0YL14 139 aa6.26□□□□□ -1.41
SMARCAL1-206ENST00000427645 H3BQ15 152 aa6.26□□□□□ -1.41
SMARCAL1-206ENST00000427645 OVOL1O14753 267 aa6.26□□□□□ -1.41
SMARCAL1-206ENST00000427645 FOLR2P14207 255 aa6.26□□□□□ -1.41
SMARCAL1-206ENST00000427645 UBE2G2P60604 165 aa6.26□□□□□ -1.41
SMARCAL1-206ENST00000427645 RPL11P62913 178 aaKnown RBP6.26□□□□□ -1.41
SMARCAL1-206ENST00000427645 SUMO1P63165 101 aaKnown RBP6.26□□□□□ -1.41
SMARCAL1-206ENST00000427645 PAFAH1B2P68402 229 aa6.26□□□□□ -1.41
SMARCAL1-206ENST00000427645 MRAPQ8TCY5 172 aa6.26□□□□□ -1.41
SMARCAL1-206ENST00000427645 RXFP4Q8TDU9 374 aa6.26□□□□□ -1.41
SMARCAL1-206ENST00000427645 HIST1H2BAQ96A08 127 aa6.26□□□□□ -1.41
SMARCAL1-206ENST00000427645 RPUSD4Q96CM3 377 aaKnown RBP6.26□□□□□ -1.41
SMARCAL1-206ENST00000427645 SLC50A1Q9BRV3 221 aa6.26□□□□□ -1.41
SMARCAL1-206ENST00000427645 SLC35B3Q9H1N7 401 aa6.26□□□□□ -1.41
SMARCAL1-206ENST00000427645 OTORQ9NRC9 128 aa6.26□□□□□ -1.41
SMARCAL1-206ENST00000427645 PRELID1Q9Y255 219 aa6.26□□□□□ -1.41
SMARCAL1-206ENST00000427645 SMAD5-AS1Q9Y6J3 95 aa6.26□□□□□ -1.41
SMARCAL1-206ENST00000427645 IGHV3OR16-13A0A075B7E8 117 aa6.25□□□□□ -1.41
SMARCAL1-206ENST00000427645 IGHV3-49A0A0A0MS15 119 aa6.25□□□□□ -1.41
SMARCAL1-206ENST00000427645 IGHV3-74A0A0B4J1X5 117 aa6.25□□□□□ -1.41
SMARCAL1-206ENST00000427645 IGHV3-66A0A0C4DH42 116 aa6.25□□□□□ -1.41
SMARCAL1-206ENST00000427645 TMEM218A2RU14 115 aa6.25□□□□□ -1.41
SMARCAL1-206ENST00000427645 PF4P02776 101 aa6.25□□□□□ -1.41
SMARCAL1-206ENST00000427645 S100A9P06702 114 aaKnown RBP6.25□□□□□ -1.41
SMARCAL1-206ENST00000427645 CSN3P07498 182 aa6.25□□□□□ -1.41
SMARCAL1-206ENST00000427645 SRP19P09132 144 aaKnown RBP6.25□□□□□ -1.41
SMARCAL1-206ENST00000427645 S100A1P23297 94 aa6.25□□□□□ -1.41
SMARCAL1-206ENST00000427645 CSN1S1P47710 185 aa6.25□□□□□ -1.41
SMARCAL1-206ENST00000427645 CD81P60033 236 aa6.25□□□□□ -1.41
SMARCAL1-206ENST00000427645 FAM74A3Q4VXF1 159 aa6.25□□□□□ -1.41
SMARCAL1-206ENST00000427645 TCF24Q7RTU0 167 aa6.25□□□□□ -1.41
SMARCAL1-206ENST00000427645 CCDC28AQ8IWP9 274 aa6.25□□□□□ -1.41
SMARCAL1-206ENST00000427645 CMTM2Q8TAZ6 248 aa6.25□□□□□ -1.41
SMARCAL1-206ENST00000427645 DUX3Q96PT4 197 aa6.25□□□□□ -1.41
SMARCAL1-206ENST00000427645 Q9H3A6 140 aa6.25□□□□□ -1.41
SMARCAL1-206ENST00000427645 MLXQ9UH92 298 aa6.25□□□□□ -1.41
SMARCAL1-206ENST00000427645 YTHDF2Q9Y5A9 579 aaKnown RBP6.25□□□□□ -1.41
SMARCAL1-206ENST00000427645 DNAH3Q8TD57 4116 aa6.24□□□□□ -1.41
SMARCAL1-206ENST00000427645 TRAV25A0A0B4J276 109 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms