RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 RPL12P30050 165 aaKnown RBP13.79□□□□□ -0.2
COL9A2-204ENST00000427563 NUTF2P61970 127 aaKnown RBP13.79□□□□□ -0.2
COL9A2-204ENST00000427563 HBG1P69891 147 aa13.79□□□□□ -0.2
COL9A2-204ENST00000427563 HBG2P69892 147 aa13.79□□□□□ -0.2
COL9A2-204ENST00000427563 VWC2Q2TAL6 325 aa13.79□□□□□ -0.2
COL9A2-204ENST00000427563 TMEM37Q8WXS4 190 aa13.79□□□□□ -0.2
COL9A2-204ENST00000427563 C1QTNF4Q9BXJ3 329 aa13.79□□□□□ -0.2
COL9A2-204ENST00000427563 MFFQ9GZY8 342 aa13.79□□□□□ -0.2
COL9A2-204ENST00000427563 ARV1Q9H2C2 271 aa13.79□□□□□ -0.2
COL9A2-204ENST00000427563 HRH4Q9H3N8 390 aa13.79□□□□□ -0.2
COL9A2-204ENST00000427563 KLK5Q9Y337 293 aaPredicted RBP13.79□□□□□ -0.2
COL9A2-204ENST00000427563 HSPB11Q9Y547 144 aa13.79□□□□□ -0.2
COL9A2-204ENST00000427563 DNAH6Q9C0G6 4158 aa13.78□□□□□ -0.2
COL9A2-204ENST00000427563 FXYD6-FXYD2A0A087WZ82 144 aa13.78□□□□□ -0.2
COL9A2-204ENST00000427563 A0A087X0K7 114 aa13.78□□□□□ -0.2
COL9A2-204ENST00000427563 PRB4P10163 310 aaPredicted RBP13.78□□□□□ -0.2
COL9A2-204ENST00000427563 S100A11P31949 105 aa13.78□□□□□ -0.2
COL9A2-204ENST00000427563 SAMD13Q5VXD3 122 aa13.78□□□□□ -0.2
COL9A2-204ENST00000427563 ZNF546Q86UE3 836 aa13.78□□□□□ -0.2
COL9A2-204ENST00000427563 RPRMQ9NS64 109 aa13.78□□□□□ -0.2
COL9A2-204ENST00000427563 WDR83OSQ9Y284 106 aa13.78□□□□□ -0.2
COL9A2-204ENST00000427563 LY6G6CO95867 125 aa13.77□□□□□ -0.21
COL9A2-204ENST00000427563 RPL7P18124 248 aaKnown RBP13.77□□□□□ -0.21
COL9A2-204ENST00000427563 PSG9Q00887 426 aa13.77□□□□□ -0.21
COL9A2-204ENST00000427563 SPATA31B1PQ5VZV4 182 aa13.77□□□□□ -0.21
COL9A2-204ENST00000427563 TCTE3Q8IZS6 198 aa13.77□□□□□ -0.21
COL9A2-204ENST00000427563 C1orf158Q8N1D5 194 aa13.77□□□□□ -0.21
COL9A2-204ENST00000427563 OR5C1Q8NGR4 320 aa13.77□□□□□ -0.21
COL9A2-204ENST00000427563 AQP10Q96PS8 301 aa13.77□□□□□ -0.21
COL9A2-204ENST00000427563 PRR20EP86478 221 aa13.76□□□□□ -0.21
COL9A2-204ENST00000427563 PRR20CP86479 221 aa13.76□□□□□ -0.21
COL9A2-204ENST00000427563 PRR20DP86480 221 aa13.76□□□□□ -0.21
COL9A2-204ENST00000427563 PRR20BP86481 221 aa13.76□□□□□ -0.21
COL9A2-204ENST00000427563 PRR20AP86496 221 aa13.76□□□□□ -0.21
COL9A2-204ENST00000427563 ATP6V1FQ16864 119 aa13.76□□□□□ -0.21
COL9A2-204ENST00000427563 MIC13Q5XKP0 118 aa13.76□□□□□ -0.21
COL9A2-204ENST00000427563 EBLN2Q6P2I7 272 aa13.76□□□□□ -0.21
COL9A2-204ENST00000427563 Q6ZTC4 211 aa13.76□□□□□ -0.21
COL9A2-204ENST00000427563 LINC00305Q7Z4B0 112 aa13.76□□□□□ -0.21
COL9A2-204ENST00000427563 AKAP14Q86UN6 197 aa13.76□□□□□ -0.21
COL9A2-204ENST00000427563 NEU1Q99519 415 aa13.76□□□□□ -0.21
COL9A2-204ENST00000427563 UQCC1Q9NVA1 299 aa13.76□□□□□ -0.21
COL9A2-204ENST00000427563 TNFSF18Q9UNG2 199 aa13.76□□□□□ -0.21
COL9A2-204ENST00000427563 RNF222A6NCQ9 220 aa13.75□□□□□ -0.21
COL9A2-204ENST00000427563 SNRPCP09234 159 aaKnown RBP13.75□□□□□ -0.21
COL9A2-204ENST00000427563 S100A7P31151 101 aa13.75□□□□□ -0.21
COL9A2-204ENST00000427563 CNN1P51911 297 aaKnown RBP13.75□□□□□ -0.21
COL9A2-204ENST00000427563 C12orf74Q32Q52 190 aa13.75□□□□□ -0.21
COL9A2-204ENST00000427563 PXDC1Q5TGL8 231 aa13.75□□□□□ -0.21
COL9A2-204ENST00000427563 ZNF767PQ75MW2 155 aa13.75□□□□□ -0.21
COL9A2-204ENST00000427563 OR11H4Q8NGC9 324 aa13.75□□□□□ -0.21
COL9A2-204ENST00000427563 CAMLGP49069 296 aa13.74□□□□□ -0.21
COL9A2-204ENST00000427563 CLINT1Q14677 625 aa13.74□□□□□ -0.21
COL9A2-204ENST00000427563 OPCMLQ14982 345 aa13.74□□□□□ -0.21
COL9A2-204ENST00000427563 IGHV3OR16-12A0A075B7B8 117 aa13.73□□□□□ -0.21
COL9A2-204ENST00000427563 UBE2L5PA0A1B0GUS4 154 aa13.73□□□□□ -0.21
COL9A2-204ENST00000427563 CRXO43186 299 aaPredicted RBP13.73□□□□□ -0.21
COL9A2-204ENST00000427563 INO80EQ8NBZ0 244 aaPredicted RBP13.73□□□□□ -0.21
COL9A2-204ENST00000427563 SMIM3Q9BZL3 60 aa13.73□□□□□ -0.21
COL9A2-204ENST00000427563 APLNQ9ULZ1 77 aa13.73□□□□□ -0.21
COL9A2-204ENST00000427563 FRAS1Q86XX4 4008 aa13.73□□□□□ -0.21
COL9A2-204ENST00000427563 TRAV5A0A0B4J249 113 aa13.72□□□□□ -0.21
COL9A2-204ENST00000427563 SLC17A3O00476 420 aa13.72□□□□□ -0.21
COL9A2-204ENST00000427563 ARPC5O15511 151 aa13.72□□□□□ -0.21
COL9A2-204ENST00000427563 COX7A2P2O60397 106 aa13.72□□□□□ -0.21
COL9A2-204ENST00000427563 ZNF738Q8NE65 137 aa13.72□□□□□ -0.21
COL9A2-204ENST00000427563 C2CD4CQ8TF44 421 aa13.72□□□□□ -0.21
COL9A2-204ENST00000427563 ATP5SQ99766 215 aa13.72□□□□□ -0.21
COL9A2-204ENST00000427563 WFDC1Q9HC57 220 aa13.72□□□□□ -0.21
COL9A2-204ENST00000427563 HMSDA8MTL9 139 aa13.71□□□□□ -0.21
COL9A2-204ENST00000427563 H3BTX0 84 aa13.71□□□□□ -0.21
COL9A2-204ENST00000427563 M0R2Z0 102 aa13.71□□□□□ -0.21
COL9A2-204ENST00000427563 PRM2P04554 102 aa13.71□□□□□ -0.21
COL9A2-204ENST00000427563 IGLC2P0DOY2 106 aa13.71□□□□□ -0.21
COL9A2-204ENST00000427563 CD300CQ08708 224 aa13.71□□□□□ -0.21
COL9A2-204ENST00000427563 PSG3Q16557 428 aa13.71□□□□□ -0.21
COL9A2-204ENST00000427563 SPINK13Q1W4C9 94 aa13.71□□□□□ -0.21
COL9A2-204ENST00000427563 C10orf113Q5VZT2 155 aa13.71□□□□□ -0.21
COL9A2-204ENST00000427563 ZNF331Q9NQX6 463 aaPredicted RBP13.71□□□□□ -0.21
COL9A2-204ENST00000427563 DNAH10Q8IVF4 4471 aa13.71□□□□□ -0.22
COL9A2-204ENST00000427563 SMIM9A6NGZ8 99 aa13.7□□□□□ -0.22
COL9A2-204ENST00000427563 C11orf94C9JXX5 98 aa13.7□□□□□ -0.22
COL9A2-204ENST00000427563 H3BQ15 152 aa13.7□□□□□ -0.22
COL9A2-204ENST00000427563 FGF7P21781 194 aa13.7□□□□□ -0.22
COL9A2-204ENST00000427563 RPL29P47914 159 aaKnown RBP13.7□□□□□ -0.22
COL9A2-204ENST00000427563 LGALS9CQ6DKI2 356 aa13.7□□□□□ -0.22
COL9A2-204ENST00000427563 RPP25LQ8N5L8 163 aaKnown RBP13.7□□□□□ -0.22
COL9A2-204ENST00000427563 OR8A1Q8NGG7 326 aa13.7□□□□□ -0.22
COL9A2-204ENST00000427563 IGF2BP2-AS1Q96M15 143 aa13.7□□□□□ -0.22
COL9A2-204ENST00000427563 DNAJC4Q9NNZ3 241 aa13.7□□□□□ -0.22
COL9A2-204ENST00000427563 IGLL5B9A064 214 aa13.69□□□□□ -0.22
COL9A2-204ENST00000427563 DUSP14O95147 198 aaKnown RBP13.69□□□□□ -0.22
COL9A2-204ENST00000427563 C1QBP02746 253 aa13.69□□□□□ -0.22
COL9A2-204ENST00000427563 B2MP61769 119 aa13.69□□□□□ -0.22
COL9A2-204ENST00000427563 SAT2Q96F10 170 aaPredicted RBP13.69□□□□□ -0.22
COL9A2-204ENST00000427563 WDR61Q9GZS3 305 aaKnown RBP13.69□□□□□ -0.22
COL9A2-204ENST00000427563 SLC39A9Q9NUM3 307 aa13.69□□□□□ -0.22
COL9A2-204ENST00000427563 PLA2G2EQ9NZK7 142 aa13.69□□□□□ -0.22
COL9A2-204ENST00000427563 RFNGQ9Y644 331 aa13.69□□□□□ -0.22
COL9A2-204ENST00000427563 TRAV10A0A0B4J240 114 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms