RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 SIGLECL1Q8N7X8 197 aa20.41■□□□□ 0.86
LDB1-202ENST00000425280 OR4X2Q8NGF9 303 aa20.41■□□□□ 0.86
LDB1-202ENST00000425280 GPR82Q96P67 336 aa20.41■□□□□ 0.86
LDB1-202ENST00000425280 TRGC2P03986 189 aa20.4■□□□□ 0.86
LDB1-202ENST00000425280 ZNF702PQ9H963 129 aa20.4■□□□□ 0.86
LDB1-202ENST00000425280 LTAP01374 205 aa20.39■□□□□ 0.86
LDB1-202ENST00000425280 APOHP02749 345 aaPredicted RBP20.39■□□□□ 0.86
LDB1-202ENST00000425280 PSMB8P28062 276 aa20.39■□□□□ 0.86
LDB1-202ENST00000425280 TEX29Q8N6K0 151 aa20.39■□□□□ 0.86
LDB1-202ENST00000425280 SRD5A3Q9H8P0 318 aa20.39■□□□□ 0.86
LDB1-202ENST00000425280 U3KQE9 123 aa20.39■□□□□ 0.86
LDB1-202ENST00000425280 UNC79Q9P2D8 2635 aa20.39■□□□□ 0.86
LDB1-202ENST00000425280 IGLV2-11P01706 119 aa20.39■□□□□ 0.85
LDB1-202ENST00000425280 PSG9Q00887 426 aa20.39■□□□□ 0.85
LDB1-202ENST00000425280 IBA57Q5T440 356 aaKnown RBP20.39■□□□□ 0.85
LDB1-202ENST00000425280 SMIM12Q96EX1 92 aa20.39■□□□□ 0.85
LDB1-202ENST00000425280 MLST8Q9BVC4 326 aa20.39■□□□□ 0.85
LDB1-202ENST00000425280 NPFFR1Q9GZQ6 430 aa20.39■□□□□ 0.85
LDB1-202ENST00000425280 AAMDCQ9H7C9 122 aa20.39■□□□□ 0.85
LDB1-202ENST00000425280 TRAV8-1A0A0A6YYK1 113 aa20.38■□□□□ 0.85
LDB1-202ENST00000425280 IGHV3-66A0A0C4DH42 116 aa20.38■□□□□ 0.85
LDB1-202ENST00000425280 KRTAP1-1Q07627 177 aa20.38■□□□□ 0.85
LDB1-202ENST00000425280 C10orf99Q6UWK7 81 aa20.38■□□□□ 0.85
LDB1-202ENST00000425280 ITPR2Q14571 2701 aa20.38■□□□□ 0.85
LDB1-202ENST00000425280 M0R3E3 92 aa20.38■□□□□ 0.85
LDB1-202ENST00000425280 IGHV3OR16-13A0A075B7E8 117 aa20.37■□□□□ 0.85
LDB1-202ENST00000425280 IGHV3-74A0A0B4J1X5 117 aa20.37■□□□□ 0.85
LDB1-202ENST00000425280 NDUFA4O00483 81 aa20.37■□□□□ 0.85
LDB1-202ENST00000425280 TYMSP04818 313 aa20.37■□□□□ 0.85
LDB1-202ENST00000425280 C1orf194Q5T5A4 169 aa20.37■□□□□ 0.85
LDB1-202ENST00000425280 Q86TA4 180 aa20.37■□□□□ 0.85
LDB1-202ENST00000425280 BIN3Q9NQY0 253 aa20.37■□□□□ 0.85
LDB1-202ENST00000425280 IGHV3-49A0A0A0MS15 119 aa20.36■□□□□ 0.85
LDB1-202ENST00000425280 DIRC3C9JPN6 131 aa20.36■□□□□ 0.85
LDB1-202ENST00000425280 UNQ9165/PRO28630Q6UXU0 137 aa20.36■□□□□ 0.85
LDB1-202ENST00000425280 FLNAP21333 2647 aaKnown RBP20.36■□□□□ 0.85
LDB1-202ENST00000425280 A0A087X0K7 114 aa20.36■□□□□ 0.85
LDB1-202ENST00000425280 TMEM89A2RUT3 159 aa20.36■□□□□ 0.85
LDB1-202ENST00000425280 ZNF253O75346 499 aa20.36■□□□□ 0.85
LDB1-202ENST00000425280 PRB4P10163 310 aaPredicted RBP20.36■□□□□ 0.85
LDB1-202ENST00000425280 RPEL1Q2QD12 228 aa20.36■□□□□ 0.85
LDB1-202ENST00000425280 FAM231DQ6ZW35 169 aa20.36■□□□□ 0.85
LDB1-202ENST00000425280 DUX5Q96PT3 197 aa20.36■□□□□ 0.85
LDB1-202ENST00000425280 TRBV6-1A0A0K0K1D8 114 aa20.35■□□□□ 0.85
LDB1-202ENST00000425280 TMEM75Q8N9X5 138 aa20.35■□□□□ 0.85
LDB1-202ENST00000425280 ZNF785A8K8V0 405 aa20.34■□□□□ 0.85
LDB1-202ENST00000425280 PHOX2AO14813 284 aa20.34■□□□□ 0.85
LDB1-202ENST00000425280 PRR27Q6MZM9 219 aa20.34■□□□□ 0.85
LDB1-202ENST00000425280 SAV1Q9H4B6 383 aaPredicted RBP20.34■□□□□ 0.85
LDB1-202ENST00000425280 ZNF320A2RRD8 509 aa20.34■□□□□ 0.85
LDB1-202ENST00000425280 PRNTQ86SH4 94 aa20.34■□□□□ 0.85
LDB1-202ENST00000425280 BTF3L4Q96K17 158 aa20.34■□□□□ 0.85
LDB1-202ENST00000425280 CD5LO43866 347 aa20.33■□□□□ 0.85
LDB1-202ENST00000425280 NUDT10Q8NFP7 164 aa20.33■□□□□ 0.85
LDB1-202ENST00000425280 NUDT11Q96G61 164 aa20.33■□□□□ 0.85
LDB1-202ENST00000425280 ZNF331Q9NQX6 463 aaPredicted RBP20.33■□□□□ 0.85
LDB1-202ENST00000425280 SERTAD4Q9NUC0 356 aa20.33■□□□□ 0.85
LDB1-202ENST00000425280 ZNF705GA8MUZ8 300 aaPredicted RBP20.33■□□□□ 0.84
LDB1-202ENST00000425280 K7EQM0 130 aa20.33■□□□□ 0.84
LDB1-202ENST00000425280 FAM209BQ5JX69 171 aa20.33■□□□□ 0.84
LDB1-202ENST00000425280 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa20.33■□□□□ 0.84
LDB1-202ENST00000425280 TLN2Q9Y4G6 2542 aa20.32■□□□□ 0.84
LDB1-202ENST00000425280 TRAV9-1A0A075B6T8 112 aa20.32■□□□□ 0.84
LDB1-202ENST00000425280 S100A6P06703 90 aa20.32■□□□□ 0.84
LDB1-202ENST00000425280 CSN1S1P47710 185 aa20.32■□□□□ 0.84
LDB1-202ENST00000425280 SNRPEP62304 92 aaKnown RBP20.32■□□□□ 0.84
LDB1-202ENST00000425280 PSG3Q16557 428 aa20.32■□□□□ 0.84
LDB1-202ENST00000425280 IGFL4Q6B9Z1 124 aa20.32■□□□□ 0.84
LDB1-202ENST00000425280 TMEM183AQ8IXX5 376 aa20.32■□□□□ 0.84
LDB1-202ENST00000425280 FRZBQ92765 325 aa20.32■□□□□ 0.84
LDB1-202ENST00000425280 Q71RC1 249 aaPredicted RBP20.31■□□□□ 0.84
LDB1-202ENST00000425280 PEF1Q9UBV8 284 aaKnown RBP20.31■□□□□ 0.84
LDB1-202ENST00000425280 AKAP9Q99996 3911 aa20.31■□□□□ 0.84
LDB1-202ENST00000425280 C5orf52A6NGY3 159 aa20.3■□□□□ 0.84
LDB1-202ENST00000425280 GATCO43716 136 aaKnown RBP20.3■□□□□ 0.84
LDB1-202ENST00000425280 HIST1H2BKO60814 126 aa20.3■□□□□ 0.84
LDB1-202ENST00000425280 HIST1H2BJP06899 126 aa20.3■□□□□ 0.84
LDB1-202ENST00000425280 HIST1H2BOP23527 126 aa20.3■□□□□ 0.84
LDB1-202ENST00000425280 HLA-DMBP28068 263 aa20.3■□□□□ 0.84
LDB1-202ENST00000425280 HIST1H2BBP33778 126 aa20.3■□□□□ 0.84
LDB1-202ENST00000425280 HIST1H2BDP58876 126 aa20.3■□□□□ 0.84
LDB1-202ENST00000425280 HIST1H2BCP62807 126 aa20.3■□□□□ 0.84
LDB1-202ENST00000425280 SLC35B1P78383 322 aa20.3■□□□□ 0.84
LDB1-202ENST00000425280 HIST2H2BEQ16778 126 aa20.3■□□□□ 0.84
LDB1-202ENST00000425280 HIST2H2BFQ5QNW6 126 aaPredicted RBP20.3■□□□□ 0.84
LDB1-202ENST00000425280 C16orf54Q6UWD8 224 aa20.3■□□□□ 0.84
LDB1-202ENST00000425280 LINC00322Q6ZN03 302 aaPredicted RBP20.3■□□□□ 0.84
LDB1-202ENST00000425280 Q8N2B8 174 aa20.3■□□□□ 0.84
LDB1-202ENST00000425280 ARL6IP6Q8N6S5 226 aa20.3■□□□□ 0.84
LDB1-202ENST00000425280 HIST1H2BHQ93079 126 aa20.3■□□□□ 0.84
LDB1-202ENST00000425280 HIST1H2BNQ99877 126 aa20.3■□□□□ 0.84
LDB1-202ENST00000425280 HIST1H2BMQ99879 126 aa20.3■□□□□ 0.84
LDB1-202ENST00000425280 PSG8Q9UQ74 426 aa20.3■□□□□ 0.84
LDB1-202ENST00000425280 TMEM86BQ8N661 226 aa20.3■□□□□ 0.84
LDB1-202ENST00000425280 SMIM27A0A1W2PRY6 76 aa20.29■□□□□ 0.84
LDB1-202ENST00000425280 CA1P00915 261 aaPredicted RBP20.29■□□□□ 0.84
LDB1-202ENST00000425280 RPLP1P05386 114 aaKnown RBP20.29■□□□□ 0.84
LDB1-202ENST00000425280 YAE1D1Q9NRH1 226 aa20.29■□□□□ 0.84
LDB1-202ENST00000425280 ZNF492Q9P255 531 aa20.29■□□□□ 0.84
LDB1-202ENST00000425280 SERTM2A0A1B0GWG4 89 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms