RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 IGHV4-28A0A0C4DH34 117 aa9.36□□□□□ -0.91
VRK3-203ENST00000424804 H3BMM0 161 aa9.36□□□□□ -0.91
VRK3-203ENST00000424804 PET100P0DJ07 73 aa9.36□□□□□ -0.91
VRK3-203ENST00000424804 PRB4P10163 310 aaPredicted RBP9.36□□□□□ -0.91
VRK3-203ENST00000424804 HLA-DRB4P13762 266 aa9.36□□□□□ -0.91
VRK3-203ENST00000424804 PLP1P60201 277 aa9.36□□□□□ -0.91
VRK3-203ENST00000424804 NUTF2P61970 127 aaKnown RBP9.36□□□□□ -0.91
VRK3-203ENST00000424804 PXDC1Q5TGL8 231 aa9.36□□□□□ -0.91
VRK3-203ENST00000424804 SAMD13Q5VXD3 122 aa9.36□□□□□ -0.91
VRK3-203ENST00000424804 RNF182Q8N6D2 247 aa9.36□□□□□ -0.91
VRK3-203ENST00000424804 THAP6Q8TBB0 222 aa9.36□□□□□ -0.91
VRK3-203ENST00000424804 C2CD4CQ8TF44 421 aa9.36□□□□□ -0.91
VRK3-203ENST00000424804 C20orf173Q96LM9 149 aa9.36□□□□□ -0.91
VRK3-203ENST00000424804 RPRMQ9NS64 109 aa9.36□□□□□ -0.91
VRK3-203ENST00000424804 XCL2Q9UBD3 114 aa9.36□□□□□ -0.91
VRK3-203ENST00000424804 WDR83OSQ9Y284 106 aa9.36□□□□□ -0.91
VRK3-203ENST00000424804 HLA-DRB4X5D2U9 266 aa9.36□□□□□ -0.91
VRK3-203ENST00000424804 RYR1P21817 5038 aa9.35□□□□□ -0.91
VRK3-203ENST00000424804 H3BTX0 84 aa9.35□□□□□ -0.91
VRK3-203ENST00000424804 MPC2O95563 127 aa9.35□□□□□ -0.91
VRK3-203ENST00000424804 B2MP61769 119 aa9.35□□□□□ -0.91
VRK3-203ENST00000424804 VWC2Q2TAL6 325 aa9.35□□□□□ -0.91
VRK3-203ENST00000424804 FOXI2Q6ZQN5 318 aa9.35□□□□□ -0.91
VRK3-203ENST00000424804 ZNF738Q8NE65 137 aa9.35□□□□□ -0.91
VRK3-203ENST00000424804 OR1L4Q8NGR5 311 aa9.35□□□□□ -0.91
VRK3-203ENST00000424804 SMIM3Q9BZL3 60 aa9.35□□□□□ -0.91
VRK3-203ENST00000424804 MED28Q9H204 178 aa9.35□□□□□ -0.91
VRK3-203ENST00000424804 SAV1Q9H4B6 383 aaPredicted RBP9.35□□□□□ -0.91
VRK3-203ENST00000424804 PXMP4Q9Y6I8 212 aa9.35□□□□□ -0.91
VRK3-203ENST00000424804 IGHV3OR16-12A0A075B7B8 117 aa9.34□□□□□ -0.91
VRK3-203ENST00000424804 ZNF705DP0CH99 300 aaPredicted RBP9.34□□□□□ -0.91
VRK3-203ENST00000424804 ZNF705BP0CI00 300 aaPredicted RBP9.34□□□□□ -0.91
VRK3-203ENST00000424804 HLA-DMBP28068 263 aa9.34□□□□□ -0.91
VRK3-203ENST00000424804 TCTAP57738 103 aa9.34□□□□□ -0.91
VRK3-203ENST00000424804 OPCMLQ14982 345 aa9.34□□□□□ -0.91
VRK3-203ENST00000424804 TMEM41BQ5BJD5 291 aa9.34□□□□□ -0.91
VRK3-203ENST00000424804 FAM78BQ5VT40 261 aa9.34□□□□□ -0.91
VRK3-203ENST00000424804 MORN5Q5VZ52 161 aa9.34□□□□□ -0.91
VRK3-203ENST00000424804 BPIFA4PQ86YQ2 179 aa9.34□□□□□ -0.91
VRK3-203ENST00000424804 TMEM37Q8WXS4 190 aa9.34□□□□□ -0.91
VRK3-203ENST00000424804 C17orf77Q96MU5 243 aa9.34□□□□□ -0.91
VRK3-203ENST00000424804 C1QTNF4Q9BXJ3 329 aa9.34□□□□□ -0.91
VRK3-203ENST00000424804 DNAJC4Q9NNZ3 241 aa9.34□□□□□ -0.91
VRK3-203ENST00000424804 SLC39A9Q9NUM3 307 aa9.34□□□□□ -0.91
VRK3-203ENST00000424804 MBD2Q9UBB5 411 aa9.34□□□□□ -0.91
VRK3-203ENST00000424804 RNF24Q9Y225 148 aa9.34□□□□□ -0.91
VRK3-203ENST00000424804 TRAV8-2A0A0B4J237 113 aa9.33□□□□□ -0.92
VRK3-203ENST00000424804 TRAV5A0A0B4J249 113 aa9.33□□□□□ -0.92
VRK3-203ENST00000424804 IGLL5B9A064 214 aa9.33□□□□□ -0.92
VRK3-203ENST00000424804 CXCL3P19876 107 aa9.33□□□□□ -0.92
VRK3-203ENST00000424804 RPL29P47914 159 aaKnown RBP9.33□□□□□ -0.92
VRK3-203ENST00000424804 FCN2Q15485 313 aa9.33□□□□□ -0.92
VRK3-203ENST00000424804 Q6ZTC4 211 aa9.33□□□□□ -0.92
VRK3-203ENST00000424804 ZNF709Q8N972 641 aa9.33□□□□□ -0.92
VRK3-203ENST00000424804 PFDN5Q99471 154 aa9.33□□□□□ -0.92
VRK3-203ENST00000424804 RNF126Q9BV68 326 aa9.33□□□□□ -0.92
VRK3-203ENST00000424804 NPCDR1Q9BY65 106 aa9.33□□□□□ -0.92
VRK3-203ENST00000424804 SLC35B3Q9H1N7 401 aa9.33□□□□□ -0.92
VRK3-203ENST00000424804 CELA1Q9UNI1 258 aa9.33□□□□□ -0.92
VRK3-203ENST00000424804 A0A0J9YX75 114 aa9.32□□□□□ -0.92
VRK3-203ENST00000424804 C11orf94C9JXX5 98 aa9.32□□□□□ -0.92
VRK3-203ENST00000424804 MIFP14174 115 aa9.32□□□□□ -0.92
VRK3-203ENST00000424804 RPL12P30050 165 aaKnown RBP9.32□□□□□ -0.92
VRK3-203ENST00000424804 PSG9Q00887 426 aa9.32□□□□□ -0.92
VRK3-203ENST00000424804 HSPB11Q9Y547 144 aa9.32□□□□□ -0.92
VRK3-203ENST00000424804 A0A087X0K7 114 aa9.31□□□□□ -0.92
VRK3-203ENST00000424804 MPDU1O75352 247 aa9.31□□□□□ -0.92
VRK3-203ENST00000424804 RHOBP62745 196 aa9.31□□□□□ -0.92
VRK3-203ENST00000424804 HIST1H1AQ02539 215 aaPredicted RBP9.31□□□□□ -0.92
VRK3-203ENST00000424804 RGS21Q2M5E4 152 aa9.31□□□□□ -0.92
VRK3-203ENST00000424804 C12orf74Q32Q52 190 aa9.31□□□□□ -0.92
VRK3-203ENST00000424804 GCSAMLQ5JQS6 135 aa9.31□□□□□ -0.92
VRK3-203ENST00000424804 SPATA31B1PQ5VZV4 182 aa9.31□□□□□ -0.92
VRK3-203ENST00000424804 LCN15Q6UWW0 184 aa9.31□□□□□ -0.92
VRK3-203ENST00000424804 ATP5SQ99766 215 aa9.31□□□□□ -0.92
VRK3-203ENST00000424804 PPP1R14DQ9NXH3 145 aa9.31□□□□□ -0.92
VRK3-203ENST00000424804 IGHV4-4A0A075B6R2 117 aa9.3□□□□□ -0.92
VRK3-203ENST00000424804 A0A1B0GVY2 172 aa9.3□□□□□ -0.92
VRK3-203ENST00000424804 C17orf112F2Z3M2 114 aa9.3□□□□□ -0.92
VRK3-203ENST00000424804 MRPS12O15235 138 aaKnown RBP9.3□□□□□ -0.92
VRK3-203ENST00000424804 IFNA5P01569 189 aa9.3□□□□□ -0.92
VRK3-203ENST00000424804 CNN1P51911 297 aaKnown RBP9.3□□□□□ -0.92
VRK3-203ENST00000424804 PSG3Q16557 428 aa9.3□□□□□ -0.92
VRK3-203ENST00000424804 OR11H7Q8NGC8 314 aa9.3□□□□□ -0.92
VRK3-203ENST00000424804 SCGB1C1Q8TD33 95 aa9.3□□□□□ -0.92
VRK3-203ENST00000424804 WDR61Q9GZS3 305 aaKnown RBP9.3□□□□□ -0.92
VRK3-203ENST00000424804 TRAV10A0A0B4J240 114 aa9.29□□□□□ -0.92
VRK3-203ENST00000424804 H3BQ15 152 aa9.29□□□□□ -0.92
VRK3-203ENST00000424804 SLC17A3O00476 420 aa9.29□□□□□ -0.92
VRK3-203ENST00000424804 DUSP14O95147 198 aaKnown RBP9.29□□□□□ -0.92
VRK3-203ENST00000424804 SPINK13Q1W4C9 94 aa9.29□□□□□ -0.92
VRK3-203ENST00000424804 ZNF767PQ75MW2 155 aa9.29□□□□□ -0.92
VRK3-203ENST00000424804 RPUSD4Q96CM3 377 aaKnown RBP9.29□□□□□ -0.92
VRK3-203ENST00000424804 SLC50A1Q9BRV3 221 aa9.29□□□□□ -0.92
VRK3-203ENST00000424804 TMEM208Q9BTX3 173 aa9.29□□□□□ -0.92
VRK3-203ENST00000424804 KCNIP2Q9NS61 270 aa9.29□□□□□ -0.92
VRK3-203ENST00000424804 ZNF705FA8MVS1 300 aaPredicted RBP9.28□□□□□ -0.92
VRK3-203ENST00000424804 M0R2Z0 102 aa9.28□□□□□ -0.92
VRK3-203ENST00000424804 PYYP10082 97 aa9.28□□□□□ -0.92
VRK3-203ENST00000424804 CXCL2P19875 107 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms