RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 TBL2Q9Y4P3 447 aaKnown RBP9.34□□□□□ -0.91
PTPRN-204ENST00000423636 FNDC10F2Z333 226 aa9.34□□□□□ -0.91
PTPRN-204ENST00000423636 P01737 135 aa9.34□□□□□ -0.91
PTPRN-204ENST00000423636 TMEM95Q3KNT9 176 aa9.34□□□□□ -0.91
PTPRN-204ENST00000423636 FAM71F2Q6NXP2 309 aa9.34□□□□□ -0.91
PTPRN-204ENST00000423636 WFDC12Q8WWY7 111 aa9.34□□□□□ -0.91
PTPRN-204ENST00000423636 TXNDC17Q9BRA2 123 aa9.34□□□□□ -0.91
PTPRN-204ENST00000423636 C21orf62Q9NYP8 219 aa9.34□□□□□ -0.91
PTPRN-204ENST00000423636 ARL2-SNX15V9GYD0 113 aa9.34□□□□□ -0.91
PTPRN-204ENST00000423636 LMO4P61968 165 aa9.34□□□□□ -0.91
PTPRN-204ENST00000423636 C8orf31Q8N9H6 132 aa9.34□□□□□ -0.91
PTPRN-204ENST00000423636 DEFB104AQ8WTQ1 72 aa9.34□□□□□ -0.91
PTPRN-204ENST00000423636 NEU4Q8WWR8 484 aaPredicted RBP9.34□□□□□ -0.91
PTPRN-204ENST00000423636 ZC2HC1AQ96GY0 325 aa9.34□□□□□ -0.91
PTPRN-204ENST00000423636 FLNAP21333 2647 aaKnown RBP9.33□□□□□ -0.92
PTPRN-204ENST00000423636 HECTD1Q9ULT8 2610 aa9.33□□□□□ -0.92
PTPRN-204ENST00000423636 F8W735 103 aaPredicted RBP9.33□□□□□ -0.92
PTPRN-204ENST00000423636 HLA-DRB1P01911 266 aa9.33□□□□□ -0.92
PTPRN-204ENST00000423636 EGR2P11161 476 aaPredicted RBP9.33□□□□□ -0.92
PTPRN-204ENST00000423636 SRD5A1P18405 259 aa9.33□□□□□ -0.92
PTPRN-204ENST00000423636 G0S2P27469 103 aa9.33□□□□□ -0.92
PTPRN-204ENST00000423636 ZNF705AQ6ZN79 300 aaPredicted RBP9.33□□□□□ -0.92
PTPRN-204ENST00000423636 POLR3KQ9Y2Y1 108 aaPredicted RBP9.33□□□□□ -0.92
PTPRN-204ENST00000423636 ATP5J2P56134 94 aa9.33□□□□□ -0.92
PTPRN-204ENST00000423636 RHOGP84095 191 aa9.33□□□□□ -0.92
PTPRN-204ENST00000423636 Q8N9W7 124 aa9.33□□□□□ -0.92
PTPRN-204ENST00000423636 GPR82Q96P67 336 aa9.33□□□□□ -0.92
PTPRN-204ENST00000423636 OSTCQ9NRP0 149 aa9.33□□□□□ -0.92
PTPRN-204ENST00000423636 HELZ2Q9BYK8 2649 aaKnown RBP9.33□□□□□ -0.92
PTPRN-204ENST00000423636 IGHV4-30-2A0A087WSY4 118 aa9.33□□□□□ -0.92
PTPRN-204ENST00000423636 SERTM2A0A1B0GWG4 89 aa9.33□□□□□ -0.92
PTPRN-204ENST00000423636 TSTD3H0UI37 97 aa9.33□□□□□ -0.92
PTPRN-204ENST00000423636 EFNA4P52798 201 aa9.33□□□□□ -0.92
PTPRN-204ENST00000423636 LINC00173Q6ZV60 143 aa9.33□□□□□ -0.92
PTPRN-204ENST00000423636 SIGLECL1Q8N7X8 197 aa9.33□□□□□ -0.92
PTPRN-204ENST00000423636 C19orf24Q9BVV8 132 aa9.33□□□□□ -0.92
PTPRN-204ENST00000423636 TENM4Q6N022 2769 aa9.33□□□□□ -0.92
PTPRN-204ENST00000423636 NPIPB5A8MRT5 1133 aa9.32□□□□□ -0.92
PTPRN-204ENST00000423636 ODF3BA8MYP8 253 aa9.32□□□□□ -0.92
PTPRN-204ENST00000423636 YPEL3P61236 119 aaPredicted RBP9.32□□□□□ -0.92
PTPRN-204ENST00000423636 OR4F17Q8NGA8 305 aa9.32□□□□□ -0.92
PTPRN-204ENST00000423636 PRORYQ9H606 182 aa9.32□□□□□ -0.92
PTPRN-204ENST00000423636 NAGKQ9UJ70 344 aa9.32□□□□□ -0.92
PTPRN-204ENST00000423636 CENPVL3A0A0U1RRI6 287 aa9.32□□□□□ -0.92
PTPRN-204ENST00000423636 LOC389332A0A1B0GUA5 103 aa9.32□□□□□ -0.92
PTPRN-204ENST00000423636 TRBV12-3P01733 135 aa9.32□□□□□ -0.92
PTPRN-204ENST00000423636 HIST2H2BCQ6DN03 193 aa9.32□□□□□ -0.92
PTPRN-204ENST00000423636 BPIFA4PQ86YQ2 179 aa9.32□□□□□ -0.92
PTPRN-204ENST00000423636 VGLL1Q99990 258 aa9.32□□□□□ -0.92
PTPRN-204ENST00000423636 SIRPDQ9H106 197 aa9.32□□□□□ -0.92
PTPRN-204ENST00000423636 AKAP9Q99996 3911 aa9.32□□□□□ -0.92
PTPRN-204ENST00000423636 A0A1W2PS18 150 aa9.31□□□□□ -0.92
PTPRN-204ENST00000423636 TMEM183BQ1AE95 376 aa9.31□□□□□ -0.92
PTPRN-204ENST00000423636 ZNF562Q6V9R5 426 aa9.31□□□□□ -0.92
PTPRN-204ENST00000423636 C5orf17Q8NAS9 161 aa9.31□□□□□ -0.92
PTPRN-204ENST00000423636 C2CD3Q4AC94 2353 aa9.31□□□□□ -0.92
PTPRN-204ENST00000423636 SMIM27A0A1W2PRY6 76 aa9.31□□□□□ -0.92
PTPRN-204ENST00000423636 ZNF785A8K8V0 405 aa9.31□□□□□ -0.92
PTPRN-204ENST00000423636 PRAC2D3DTV9 90 aa9.31□□□□□ -0.92
PTPRN-204ENST00000423636 MYCNOSP40205 109 aa9.31□□□□□ -0.92
PTPRN-204ENST00000423636 MFAP4P55083 255 aa9.31□□□□□ -0.92
PTPRN-204ENST00000423636 BLCAPP62952 87 aa9.31□□□□□ -0.92
PTPRN-204ENST00000423636 ITPR3Q14573 2671 aa9.31□□□□□ -0.92
PTPRN-204ENST00000423636 FASNP49327 2511 aaKnown RBP9.31□□□□□ -0.92
PTPRN-204ENST00000423636 IGHV2-70DA0A0C4DH43 119 aa9.31□□□□□ -0.92
PTPRN-204ENST00000423636 IZUMO1RA6ND01 250 aa9.31□□□□□ -0.92
PTPRN-204ENST00000423636 EREGO14944 169 aa9.31□□□□□ -0.92
PTPRN-204ENST00000423636 CTSGP08311 255 aa9.31□□□□□ -0.92
PTPRN-204ENST00000423636 ARMS2P0C7Q2 107 aa9.31□□□□□ -0.92
PTPRN-204ENST00000423636 RPL11P62913 178 aaKnown RBP9.31□□□□□ -0.92
PTPRN-204ENST00000423636 DTX2Q86UW9 622 aa9.31□□□□□ -0.92
PTPRN-204ENST00000423636 MBD6Q96DN6 1003 aa9.31□□□□□ -0.92
PTPRN-204ENST00000423636 CCL19Q99731 98 aa9.31□□□□□ -0.92
PTPRN-204ENST00000423636 C1RLQ9NZP8 487 aa9.31□□□□□ -0.92
PTPRN-204ENST00000423636 MRPL27Q9P0M9 148 aaKnown RBP9.31□□□□□ -0.92
PTPRN-204ENST00000423636 AGRNO00468 2067 aa9.3□□□□□ -0.92
PTPRN-204ENST00000423636 HIST1H1EP10412 219 aaKnown RBP9.3□□□□□ -0.92
PTPRN-204ENST00000423636 EDN2P20800 178 aa9.3□□□□□ -0.92
PTPRN-204ENST00000423636 CRIP1P50238 77 aa9.3□□□□□ -0.92
PTPRN-204ENST00000423636 SSX8Q7RTT4 187 aa9.3□□□□□ -0.92
PTPRN-204ENST00000423636 WFDC3Q8IUB2 231 aa9.3□□□□□ -0.92
PTPRN-204ENST00000423636 RNF2Q99496 336 aa9.3□□□□□ -0.92
PTPRN-204ENST00000423636 NRN1Q9NPD7 142 aa9.3□□□□□ -0.92
PTPRN-204ENST00000423636 IGLV11-55A0A075B6I3 123 aa9.3□□□□□ -0.92
PTPRN-204ENST00000423636 TRBV19A0A075B6N1 114 aa9.3□□□□□ -0.92
PTPRN-204ENST00000423636 Q86TA4 180 aa9.3□□□□□ -0.92
PTPRN-204ENST00000423636 AJUBAQ96IF1 538 aa9.3□□□□□ -0.92
PTPRN-204ENST00000423636 BBC3Q96PG8 261 aaPredicted RBP9.3□□□□□ -0.92
PTPRN-204ENST00000423636 INS-IGF2F8WCM5 200 aa9.3□□□□□ -0.92
PTPRN-204ENST00000423636 SMKR1H3BMG3 65 aa9.3□□□□□ -0.92
PTPRN-204ENST00000423636 AVPP01185 164 aa9.3□□□□□ -0.92
PTPRN-204ENST00000423636 IGLV2-11P01706 119 aa9.3□□□□□ -0.92
PTPRN-204ENST00000423636 FAM106CPP0CH98 169 aa9.3□□□□□ -0.92
PTPRN-204ENST00000423636 PDLIM4P50479 330 aa9.3□□□□□ -0.92
PTPRN-204ENST00000423636 ATP5IP56385 69 aaPredicted RBP9.3□□□□□ -0.92
PTPRN-204ENST00000423636 TPPP2P59282 170 aa9.3□□□□□ -0.92
PTPRN-204ENST00000423636 TAS2R60P59551 318 aa9.3□□□□□ -0.92
PTPRN-204ENST00000423636 C10orf99Q6UWK7 81 aa9.3□□□□□ -0.92
PTPRN-204ENST00000423636 SHANK2-AS3Q9BTD1 123 aa9.3□□□□□ -0.92
PTPRN-204ENST00000423636 RPP21Q9H633 154 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms