RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 LGALS7P47929 136 aa13.18□□□□□ -0.3
NPC1L1-203ENST00000423141 LYPD2Q6UXB3 125 aa13.18□□□□□ -0.3
NPC1L1-203ENST00000423141 TMEM14CQ9P0S9 112 aa13.18□□□□□ -0.3
NPC1L1-203ENST00000423141 DMXL1Q9Y485 3027 aa13.17□□□□□ -0.3
NPC1L1-203ENST00000423141 TRBV19A0A075B6N1 114 aa13.17□□□□□ -0.3
NPC1L1-203ENST00000423141 CD59P13987 128 aa13.17□□□□□ -0.3
NPC1L1-203ENST00000423141 PAX8Q06710 450 aa13.17□□□□□ -0.3
NPC1L1-203ENST00000423141 ZNF493Q6ZR52 646 aa13.17□□□□□ -0.3
NPC1L1-203ENST00000423141 TMEM75Q8N9X5 138 aa13.17□□□□□ -0.3
NPC1L1-203ENST00000423141 MALRD1Q5VYJ5 2156 aa13.17□□□□□ -0.3
NPC1L1-203ENST00000423141 A0A1W2PRD5 423 aa13.17□□□□□ -0.3
NPC1L1-203ENST00000423141 A0A1W2PRF3 423 aa13.17□□□□□ -0.3
NPC1L1-203ENST00000423141 A0A1W2PRM7 423 aa13.17□□□□□ -0.3
NPC1L1-203ENST00000423141 SIGLEC15Q6ZMC9 328 aa13.17□□□□□ -0.3
NPC1L1-203ENST00000423141 K7ERJ3 54 aa13.16□□□□□ -0.3
NPC1L1-203ENST00000423141 HBDP02042 147 aa13.16□□□□□ -0.3
NPC1L1-203ENST00000423141 PSG3Q16557 428 aa13.16□□□□□ -0.3
NPC1L1-203ENST00000423141 MRPL51Q4U2R6 128 aaKnown RBP13.16□□□□□ -0.3
NPC1L1-203ENST00000423141 FAM104BQ5XKR9 115 aa13.16□□□□□ -0.3
NPC1L1-203ENST00000423141 OR4X2Q8NGF9 303 aa13.16□□□□□ -0.3
NPC1L1-203ENST00000423141 IFI27L1Q96BM0 104 aa13.16□□□□□ -0.3
NPC1L1-203ENST00000423141 C18orf15Q96N68 181 aa13.16□□□□□ -0.3
NPC1L1-203ENST00000423141 NGBQ9NPG2 151 aa13.16□□□□□ -0.3
NPC1L1-203ENST00000423141 U3KQK5 164 aa13.16□□□□□ -0.3
NPC1L1-203ENST00000423141 TPRP12270 2363 aaKnown RBP13.16□□□□□ -0.3
NPC1L1-203ENST00000423141 A0A1B0GW15 77 aa13.16□□□□□ -0.3
NPC1L1-203ENST00000423141 GNG7O60262 68 aa13.16□□□□□ -0.3
NPC1L1-203ENST00000423141 ZNF883P0CG24 379 aa13.16□□□□□ -0.3
NPC1L1-203ENST00000423141 FCGR2BP31994 310 aaPredicted RBP13.16□□□□□ -0.3
NPC1L1-203ENST00000423141 FXYD2P54710 66 aa13.16□□□□□ -0.3
NPC1L1-203ENST00000423141 RPL24P83731 157 aaKnown RBP13.16□□□□□ -0.3
NPC1L1-203ENST00000423141 ORMDL3Q8N138 153 aa13.16□□□□□ -0.3
NPC1L1-203ENST00000423141 IGKV2D-26A0A0A0MRZ7 120 aa13.15□□□□□ -0.3
NPC1L1-203ENST00000423141 TRBV6-1A0A0K0K1D8 114 aa13.15□□□□□ -0.3
NPC1L1-203ENST00000423141 TEX48A0A1B0GUV7 120 aa13.15□□□□□ -0.3
NPC1L1-203ENST00000423141 IGKV1-17P01599 117 aa13.15□□□□□ -0.3
NPC1L1-203ENST00000423141 RBPJQ06330 500 aa13.15□□□□□ -0.3
NPC1L1-203ENST00000423141 SAMD5Q5TGI4 173 aa13.15□□□□□ -0.3
NPC1L1-203ENST00000423141 OR5A1Q8NGJ0 315 aa13.15□□□□□ -0.3
NPC1L1-203ENST00000423141 K7EMI3 77 aa13.15□□□□□ -0.3
NPC1L1-203ENST00000423141 SIVA1O15304 175 aa13.15□□□□□ -0.3
NPC1L1-203ENST00000423141 NDUFS7O75251 213 aa13.15□□□□□ -0.3
NPC1L1-203ENST00000423141 NPYP01303 97 aa13.15□□□□□ -0.3
NPC1L1-203ENST00000423141 FABP2P12104 132 aa13.15□□□□□ -0.3
NPC1L1-203ENST00000423141 GCSHP23434 173 aa13.15□□□□□ -0.3
NPC1L1-203ENST00000423141 RASL11BQ9BPW5 248 aa13.15□□□□□ -0.3
NPC1L1-203ENST00000423141 MGAQ8IWI9 3026 aa13.15□□□□□ -0.3
NPC1L1-203ENST00000423141 TEX22C9J3V5 150 aa13.14□□□□□ -0.31
NPC1L1-203ENST00000423141 PPIAL4GP0DN37 164 aa13.14□□□□□ -0.31
NPC1L1-203ENST00000423141 FAM27E3Q08E93 113 aa13.14□□□□□ -0.31
NPC1L1-203ENST00000423141 CHTOPQ9Y3Y2 248 aaKnown RBP13.14□□□□□ -0.31
NPC1L1-203ENST00000423141 MBD3L4A6NDZ8 208 aaPredicted RBP13.14□□□□□ -0.31
NPC1L1-203ENST00000423141 MBD3L3A6NE82 208 aaPredicted RBP13.14□□□□□ -0.31
NPC1L1-203ENST00000423141 MBD3L5A6NJ08 208 aaPredicted RBP13.14□□□□□ -0.31
NPC1L1-203ENST00000423141 BCL6BQ8N143 479 aaPredicted RBP13.14□□□□□ -0.31
NPC1L1-203ENST00000423141 LINC00311Q8N616 119 aa13.14□□□□□ -0.31
NPC1L1-203ENST00000423141 MBD3L2Q8NHZ7 208 aaPredicted RBP13.14□□□□□ -0.31
NPC1L1-203ENST00000423141 FBLL1A6NHQ2 334 aaKnown RBP13.13□□□□□ -0.31
NPC1L1-203ENST00000423141 CIDEAO60543 219 aa13.13□□□□□ -0.31
NPC1L1-203ENST00000423141 C1orf185Q5T7R7 199 aa13.13□□□□□ -0.31
NPC1L1-203ENST00000423141 CTSZQ9UBR2 303 aa13.13□□□□□ -0.31
NPC1L1-203ENST00000423141 SIGLEC9Q9Y336 463 aa13.13□□□□□ -0.31
NPC1L1-203ENST00000423141 PPIAL4CA0A0B4J2A2 164 aa13.13□□□□□ -0.31
NPC1L1-203ENST00000423141 WI2-2373I1.2A0A1W2PRP0 233 aa13.13□□□□□ -0.31
NPC1L1-203ENST00000423141 ZNF207O43670 478 aaKnown RBP13.13□□□□□ -0.31
NPC1L1-203ENST00000423141 MC5RP33032 325 aa13.13□□□□□ -0.31
NPC1L1-203ENST00000423141 Q6AWC8 147 aa13.13□□□□□ -0.31
NPC1L1-203ENST00000423141 CCL17Q92583 94 aa13.13□□□□□ -0.31
NPC1L1-203ENST00000423141 COL25A1Q9BXS0 654 aaPredicted RBP13.13□□□□□ -0.31
NPC1L1-203ENST00000423141 TRAV17A0A0B4J275 112 aa13.12□□□□□ -0.31
NPC1L1-203ENST00000423141 I3L2K1 104 aa13.12□□□□□ -0.31
NPC1L1-203ENST00000423141 CRYGBP07316 175 aa13.12□□□□□ -0.31
NPC1L1-203ENST00000423141 CD40P25942 277 aa13.12□□□□□ -0.31
NPC1L1-203ENST00000423141 SAMD13Q5VXD3 122 aa13.12□□□□□ -0.31
NPC1L1-203ENST00000423141 SHANK2-AS3Q9BTD1 123 aa13.12□□□□□ -0.31
NPC1L1-203ENST00000423141 TMEM189A5PLL7 270 aa13.12□□□□□ -0.31
NPC1L1-203ENST00000423141 K7EQM0 130 aa13.12□□□□□ -0.31
NPC1L1-203ENST00000423141 GAS8-AS1O95177 125 aa13.12□□□□□ -0.31
NPC1L1-203ENST00000423141 SMIM13P0DJ93 91 aa13.12□□□□□ -0.31
NPC1L1-203ENST00000423141 CT45A10P0DMU9 189 aa13.12□□□□□ -0.31
NPC1L1-203ENST00000423141 PRSS33Q8NF86 280 aa13.12□□□□□ -0.31
NPC1L1-203ENST00000423141 SCNM1Q9BWG6 230 aa13.12□□□□□ -0.31
NPC1L1-203ENST00000423141 GTSF1LQ9H1H1 148 aa13.12□□□□□ -0.31
NPC1L1-203ENST00000423141 FAM215AQ9Y5M1 114 aa13.12□□□□□ -0.31
NPC1L1-203ENST00000423141 CDX4O14627 284 aaPredicted RBP13.11□□□□□ -0.31
NPC1L1-203ENST00000423141 LOXP28300 417 aaPredicted RBP13.11□□□□□ -0.31
NPC1L1-203ENST00000423141 CKS2P33552 79 aa13.11□□□□□ -0.31
NPC1L1-203ENST00000423141 DLX6P56179 175 aa13.11□□□□□ -0.31
NPC1L1-203ENST00000423141 FBXL15Q9H469 300 aa13.11□□□□□ -0.31
NPC1L1-203ENST00000423141 S4R3C0 116 aa13.11□□□□□ -0.31
NPC1L1-203ENST00000423141 SH2D1AO60880 128 aa13.11□□□□□ -0.31
NPC1L1-203ENST00000423141 PPIAL4EA0A075B759 164 aa13.1□□□□□ -0.31
NPC1L1-203ENST00000423141 H3BRN7 92 aa13.1□□□□□ -0.31
NPC1L1-203ENST00000423141 NDUFB3O43676 98 aa13.1□□□□□ -0.31
NPC1L1-203ENST00000423141 PPIAL4FP0DN26 164 aa13.1□□□□□ -0.31
NPC1L1-203ENST00000423141 SMIM17P0DL12 118 aa13.1□□□□□ -0.31
NPC1L1-203ENST00000423141 IGHV1-8P0DP01 117 aa13.1□□□□□ -0.31
NPC1L1-203ENST00000423141 PPP1R27Q86WC6 154 aa13.1□□□□□ -0.31
NPC1L1-203ENST00000423141 MRPS12O15235 138 aaKnown RBP13.09□□□□□ -0.31
NPC1L1-203ENST00000423141 IL4P05112 153 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 344 ms