RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 KLF17Q5JT82 389 aaPredicted RBP12.03□□□□□ -0.48
SEMA3B-203ENST00000419007 GFRALQ6UXV0 394 aa12.03□□□□□ -0.48
SEMA3B-203ENST00000419007 FA2HQ7L5A8 372 aa12.03□□□□□ -0.48
SEMA3B-203ENST00000419007 BPIFA4PQ86YQ2 179 aa12.03□□□□□ -0.48
SEMA3B-203ENST00000419007 RALYQ9UKM9 306 aaKnown RBP12.03□□□□□ -0.48
SEMA3B-203ENST00000419007 E7EQL1 145 aa12.03□□□□□ -0.48
SEMA3B-203ENST00000419007 BUB1B-PAK6H3BSN5 160 aa12.03□□□□□ -0.48
SEMA3B-203ENST00000419007 TNFRSF13BO14836 293 aaPredicted RBP12.03□□□□□ -0.48
SEMA3B-203ENST00000419007 HAX1O00165 279 aa12.02□□□□□ -0.48
SEMA3B-203ENST00000419007 IGKV1-17P01599 117 aa12.02□□□□□ -0.48
SEMA3B-203ENST00000419007 IL4P05112 153 aa12.02□□□□□ -0.48
SEMA3B-203ENST00000419007 FCGR2BP31994 310 aaPredicted RBP12.02□□□□□ -0.48
SEMA3B-203ENST00000419007 RIGQ13278 110 aa12.02□□□□□ -0.48
SEMA3B-203ENST00000419007 ACACBO00763 2458 aa12.02□□□□□ -0.49
SEMA3B-203ENST00000419007 K7EQM0 130 aa12.02□□□□□ -0.49
SEMA3B-203ENST00000419007 PLP1P60201 277 aa12.02□□□□□ -0.49
SEMA3B-203ENST00000419007 PSG8Q9UQ74 426 aa12.02□□□□□ -0.49
SEMA3B-203ENST00000419007 OR2T8A6NH00 312 aa12.01□□□□□ -0.49
SEMA3B-203ENST00000419007 NPIPB6E9PJ23 425 aa12.01□□□□□ -0.49
SEMA3B-203ENST00000419007 HLA-DRB1P01911 266 aa12.01□□□□□ -0.49
SEMA3B-203ENST00000419007 OR8A1Q8NGG7 326 aa12.01□□□□□ -0.49
SEMA3B-203ENST00000419007 LOC105371242A0A075B767 164 aa12.01□□□□□ -0.49
SEMA3B-203ENST00000419007 FAM231BA6NCW3 169 aa12.01□□□□□ -0.49
SEMA3B-203ENST00000419007 CRYGBP07316 175 aa12.01□□□□□ -0.49
SEMA3B-203ENST00000419007 ONECUT1Q9UBC0 465 aa12.01□□□□□ -0.49
SEMA3B-203ENST00000419007 HILPDAQ9Y5L2 63 aa12.01□□□□□ -0.49
SEMA3B-203ENST00000419007 SPTBN1Q01082 2364 aaKnown RBP12.01□□□□□ -0.49
SEMA3B-203ENST00000419007 I3L2K1 104 aa12.01□□□□□ -0.49
SEMA3B-203ENST00000419007 IGLV1-47P01700 117 aa12.01□□□□□ -0.49
SEMA3B-203ENST00000419007 FXYD7P58549 80 aa12.01□□□□□ -0.49
SEMA3B-203ENST00000419007 ARF6P62330 175 aa12.01□□□□□ -0.49
SEMA3B-203ENST00000419007 BVES-AS1Q5T3Y7 98 aa12.01□□□□□ -0.49
SEMA3B-203ENST00000419007 PET117Q6UWS5 81 aa12.01□□□□□ -0.49
SEMA3B-203ENST00000419007 NEU4Q8WWR8 484 aaPredicted RBP12.01□□□□□ -0.49
SEMA3B-203ENST00000419007 TRBV19A0A075B6N1 114 aa12□□□□□ -0.49
SEMA3B-203ENST00000419007 KAAG1Q9UBP8 84 aa12□□□□□ -0.49
SEMA3B-203ENST00000419007 PPIAL4CA0A0B4J2A2 164 aa12□□□□□ -0.49
SEMA3B-203ENST00000419007 IGHV2-70DA0A0C4DH43 119 aa12□□□□□ -0.49
SEMA3B-203ENST00000419007 CT45A10P0DMU9 189 aa12□□□□□ -0.49
SEMA3B-203ENST00000419007 PPIAL4GP0DN37 164 aa12□□□□□ -0.49
SEMA3B-203ENST00000419007 ABHD17AQ96GS6 310 aa12□□□□□ -0.49
SEMA3B-203ENST00000419007 C8orf49Q96NF6 230 aa12□□□□□ -0.49
SEMA3B-203ENST00000419007 ZNF785A8K8V0 405 aa11.99□□□□□ -0.49
SEMA3B-203ENST00000419007 FAM106CPP0CH98 169 aa11.99□□□□□ -0.49
SEMA3B-203ENST00000419007 RBPJQ06330 500 aa11.99□□□□□ -0.49
SEMA3B-203ENST00000419007 FAM106AQ4KMX7 169 aa11.99□□□□□ -0.49
SEMA3B-203ENST00000419007 TMEM14CQ9P0S9 112 aa11.99□□□□□ -0.49
SEMA3B-203ENST00000419007 TIMM23O14925 209 aa11.99□□□□□ -0.49
SEMA3B-203ENST00000419007 HES1Q14469 280 aa11.99□□□□□ -0.49
SEMA3B-203ENST00000419007 C12orf54Q6X4T0 127 aa11.99□□□□□ -0.49
SEMA3B-203ENST00000419007 BCL6BQ8N143 479 aaPredicted RBP11.99□□□□□ -0.49
SEMA3B-203ENST00000419007 DCHS2Q6V1P9 2916 aa11.99□□□□□ -0.49
SEMA3B-203ENST00000419007 TAX1BP3O14907 124 aa11.99□□□□□ -0.49
SEMA3B-203ENST00000419007 IFI27P40305 119 aaPredicted RBP11.99□□□□□ -0.49
SEMA3B-203ENST00000419007 CSN1S1P47710 185 aa11.99□□□□□ -0.49
SEMA3B-203ENST00000419007 PVRIGQ6DKI7 326 aa11.99□□□□□ -0.49
SEMA3B-203ENST00000419007 RNF125Q96EQ8 232 aa11.99□□□□□ -0.49
SEMA3B-203ENST00000419007 SHANK2-AS3Q9BTD1 123 aa11.99□□□□□ -0.49
SEMA3B-203ENST00000419007 SCRT2Q9NQ03 307 aa11.99□□□□□ -0.49
SEMA3B-203ENST00000419007 RELNP78509 3460 aa11.98□□□□□ -0.49
SEMA3B-203ENST00000419007 SHISA9B4DS77 424 aa11.98□□□□□ -0.49
SEMA3B-203ENST00000419007 NCR2O95944 276 aa11.98□□□□□ -0.49
SEMA3B-203ENST00000419007 C1RLQ9NZP8 487 aa11.98□□□□□ -0.49
SEMA3B-203ENST00000419007 COL6A6A6NMZ7 2263 aa11.98□□□□□ -0.49
SEMA3B-203ENST00000419007 CRIP1P50238 77 aa11.98□□□□□ -0.49
SEMA3B-203ENST00000419007 AMMECR1LQ6DCA0 310 aa11.98□□□□□ -0.49
SEMA3B-203ENST00000419007 SIGLEC15Q6ZMC9 328 aa11.98□□□□□ -0.49
SEMA3B-203ENST00000419007 SELENOKQ9Y6D0 94 aa11.98□□□□□ -0.49
SEMA3B-203ENST00000419007 TMEM213A2RRL7 107 aa11.98□□□□□ -0.49
SEMA3B-203ENST00000419007 K7EIM0 57 aa11.98□□□□□ -0.49
SEMA3B-203ENST00000419007 GNG7O60262 68 aa11.98□□□□□ -0.49
SEMA3B-203ENST00000419007 RBX1P62877 108 aa11.98□□□□□ -0.49
SEMA3B-203ENST00000419007 PSG3Q16557 428 aa11.98□□□□□ -0.49
SEMA3B-203ENST00000419007 OR10AG1Q8NH19 301 aa11.98□□□□□ -0.49
SEMA3B-203ENST00000419007 D6R8Y8 96 aa11.97□□□□□ -0.49
SEMA3B-203ENST00000419007 LOXL1Q08397 574 aaPredicted RBP11.97□□□□□ -0.49
SEMA3B-203ENST00000419007 TNFRSF14Q92956 283 aa11.97□□□□□ -0.49
SEMA3B-203ENST00000419007 IGHV3-23P01764 117 aa11.97□□□□□ -0.49
SEMA3B-203ENST00000419007 FOXE3Q13461 319 aa11.97□□□□□ -0.49
SEMA3B-203ENST00000419007 PRR30Q53SZ7 412 aaPredicted RBP11.97□□□□□ -0.49
SEMA3B-203ENST00000419007 ZNF491Q8N8L2 437 aa11.97□□□□□ -0.49
SEMA3B-203ENST00000419007 ZNF747Q9BV97 191 aa11.97□□□□□ -0.49
SEMA3B-203ENST00000419007 AAMDCQ9H7C9 122 aa11.97□□□□□ -0.49
SEMA3B-203ENST00000419007 LY6HO94772 140 aa11.96□□□□□ -0.49
SEMA3B-203ENST00000419007 GPR183P32249 361 aa11.96□□□□□ -0.49
SEMA3B-203ENST00000419007 UQCRFS1P47985 274 aa11.96□□□□□ -0.49
SEMA3B-203ENST00000419007 LYZL1Q6UWQ5 148 aa11.96□□□□□ -0.49
SEMA3B-203ENST00000419007 AMN1Q8IY45 258 aa11.96□□□□□ -0.49
SEMA3B-203ENST00000419007 TMEM75Q8N9X5 138 aa11.96□□□□□ -0.49
SEMA3B-203ENST00000419007 IGHV3OR16-8A0A075B7F1 116 aa11.96□□□□□ -0.5
SEMA3B-203ENST00000419007 TRAV30A0A087WSZ9 112 aa11.96□□□□□ -0.5
SEMA3B-203ENST00000419007 H3BRN7 92 aa11.96□□□□□ -0.5
SEMA3B-203ENST00000419007 LINC01545Q5VT33 79 aa11.96□□□□□ -0.5
SEMA3B-203ENST00000419007 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.95□□□□□ -0.5
SEMA3B-203ENST00000419007 APOBEC3AP31941 199 aaPredicted RBP11.95□□□□□ -0.5
SEMA3B-203ENST00000419007 LDLRAD2Q5SZI1 272 aa11.95□□□□□ -0.5
SEMA3B-203ENST00000419007 DEFB125Q8N687 156 aa11.95□□□□□ -0.5
SEMA3B-203ENST00000419007 TMEM189A5PLL7 270 aa11.95□□□□□ -0.5
SEMA3B-203ENST00000419007 LINC01560Q8TB33 94 aa11.95□□□□□ -0.5
SEMA3B-203ENST00000419007 ZNF414Q96IQ9 312 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms