RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 RNF125Q96EQ8 232 aa9.4□□□□□ -0.91
LIMK1-202ENST00000418310 SCNM1Q9BWG6 230 aa9.4□□□□□ -0.91
LIMK1-202ENST00000418310 OTORQ9NRC9 128 aa9.4□□□□□ -0.91
LIMK1-202ENST00000418310 IGHV3-66A0A0C4DH42 116 aa9.39□□□□□ -0.91
LIMK1-202ENST00000418310 OR2J3O76001 311 aa9.39□□□□□ -0.91
LIMK1-202ENST00000418310 HLA-DMBP28068 263 aa9.39□□□□□ -0.91
LIMK1-202ENST00000418310 PRSS22Q9GZN4 317 aa9.39□□□□□ -0.91
LIMK1-202ENST00000418310 LOC102724200A0A096LPH7 203 aaPredicted RBP9.39□□□□□ -0.91
LIMK1-202ENST00000418310 OR2T8A6NH00 312 aa9.39□□□□□ -0.91
LIMK1-202ENST00000418310 IGLV2-11P01706 119 aa9.39□□□□□ -0.91
LIMK1-202ENST00000418310 APOHP02749 345 aaPredicted RBP9.39□□□□□ -0.91
LIMK1-202ENST00000418310 FAM106CPP0CH98 169 aa9.39□□□□□ -0.91
LIMK1-202ENST00000418310 PTTG1IPP53801 180 aa9.39□□□□□ -0.91
LIMK1-202ENST00000418310 FAM106AQ4KMX7 169 aa9.39□□□□□ -0.91
LIMK1-202ENST00000418310 PSG8Q9UQ74 426 aa9.39□□□□□ -0.91
LIMK1-202ENST00000418310 CBY1Q9Y3M2 126 aa9.39□□□□□ -0.91
LIMK1-202ENST00000418310 TMEM213A2RRL7 107 aa9.38□□□□□ -0.91
LIMK1-202ENST00000418310 KLF5Q13887 457 aaPredicted RBP9.38□□□□□ -0.91
LIMK1-202ENST00000418310 MPV17L2Q567V2 206 aa9.38□□□□□ -0.91
LIMK1-202ENST00000418310 RASL11AQ6T310 242 aa9.38□□□□□ -0.91
LIMK1-202ENST00000418310 ATP5L2Q7Z4Y8 100 aa9.38□□□□□ -0.91
LIMK1-202ENST00000418310 JKAMPQ9P055 326 aa9.38□□□□□ -0.91
LIMK1-202ENST00000418310 IGHV3-49A0A0A0MS15 119 aa9.38□□□□□ -0.91
LIMK1-202ENST00000418310 SYS1-DBNDD2H3BUS1 97 aa9.38□□□□□ -0.91
LIMK1-202ENST00000418310 RBPJQ06330 500 aa9.38□□□□□ -0.91
LIMK1-202ENST00000418310 FAM120AOSQ5T036 256 aa9.38□□□□□ -0.91
LIMK1-202ENST00000418310 OR8A1Q8NGG7 326 aa9.38□□□□□ -0.91
LIMK1-202ENST00000418310 TRBV19A0A075B6N1 114 aa9.38□□□□□ -0.91
LIMK1-202ENST00000418310 ZNF785A8K8V0 405 aa9.38□□□□□ -0.91
LIMK1-202ENST00000418310 SMKR1H3BMG3 65 aa9.38□□□□□ -0.91
LIMK1-202ENST00000418310 NDUFS7O75251 213 aa9.38□□□□□ -0.91
LIMK1-202ENST00000418310 ZNF491Q8N8L2 437 aa9.38□□□□□ -0.91
LIMK1-202ENST00000418310 TMEM75Q8N9X5 138 aa9.38□□□□□ -0.91
LIMK1-202ENST00000418310 PRSS3P2Q8NHM4 247 aa9.38□□□□□ -0.91
LIMK1-202ENST00000418310 ZFP30Q9Y2G7 519 aa9.38□□□□□ -0.91
LIMK1-202ENST00000418310 A0A1B0GUT8 65 aa9.37□□□□□ -0.91
LIMK1-202ENST00000418310 NBR2O15453 112 aa9.37□□□□□ -0.91
LIMK1-202ENST00000418310 LIPFP07098 398 aa9.37□□□□□ -0.91
LIMK1-202ENST00000418310 NDPQ00604 133 aa9.37□□□□□ -0.91
LIMK1-202ENST00000418310 HIVEP3Q5T1R4 2406 aa9.37□□□□□ -0.91
LIMK1-202ENST00000418310 CBY3A6NI87 242 aa9.37□□□□□ -0.91
LIMK1-202ENST00000418310 TMEM11P17152 192 aa9.37□□□□□ -0.91
LIMK1-202ENST00000418310 CRIP1P50238 77 aa9.37□□□□□ -0.91
LIMK1-202ENST00000418310 LOXL1Q08397 574 aaPredicted RBP9.37□□□□□ -0.91
LIMK1-202ENST00000418310 C20orf202A1L168 122 aa9.37□□□□□ -0.91
LIMK1-202ENST00000418310 NUDT3O95989 172 aa9.37□□□□□ -0.91
LIMK1-202ENST00000418310 CT45A10P0DMU9 189 aa9.37□□□□□ -0.91
LIMK1-202ENST00000418310 SIGLEC15Q6ZMC9 328 aa9.37□□□□□ -0.91
LIMK1-202ENST00000418310 C8orf31Q8N9H6 132 aa9.37□□□□□ -0.91
LIMK1-202ENST00000418310 NCR2O95944 276 aa9.36□□□□□ -0.91
LIMK1-202ENST00000418310 PPIFP30405 207 aaKnown RBP9.36□□□□□ -0.91
LIMK1-202ENST00000418310 AMN1Q8IY45 258 aa9.36□□□□□ -0.91
LIMK1-202ENST00000418310 SHANK2-AS3Q9BTD1 123 aa9.36□□□□□ -0.91
LIMK1-202ENST00000418310 DPM3Q9P2X0 92 aa9.36□□□□□ -0.91
LIMK1-202ENST00000418310 FOXE3Q13461 319 aa9.36□□□□□ -0.91
LIMK1-202ENST00000418310 FA2HQ7L5A8 372 aa9.36□□□□□ -0.91
LIMK1-202ENST00000418310 DYNAPQ8N1N2 210 aa9.36□□□□□ -0.91
LIMK1-202ENST00000418310 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.36□□□□□ -0.911e-6■■■□□ 17.8
LIMK1-202ENST00000418310 A0A087X0K7 114 aa9.35□□□□□ -0.91
LIMK1-202ENST00000418310 HSBP1L1C9JCN9 74 aa9.35□□□□□ -0.91
LIMK1-202ENST00000418310 CCL25O15444 150 aa9.35□□□□□ -0.91
LIMK1-202ENST00000418310 MAP1LC3CQ9BXW4 147 aa9.35□□□□□ -0.91
LIMK1-202ENST00000418310 ZNF492Q9P255 531 aa9.35□□□□□ -0.91
LIMK1-202ENST00000418310 NPIPB5A8MRT5 1133 aa9.35□□□□□ -0.91
LIMK1-202ENST00000418310 K7EQM0 130 aa9.35□□□□□ -0.91
LIMK1-202ENST00000418310 IFI27P40305 119 aaPredicted RBP9.35□□□□□ -0.91
LIMK1-202ENST00000418310 VAMP3Q15836 100 aa9.35□□□□□ -0.91
LIMK1-202ENST00000418310 ECSCRQ19T08 205 aa9.35□□□□□ -0.91
LIMK1-202ENST00000418310 LYZL1Q6UWQ5 148 aa9.35□□□□□ -0.91
LIMK1-202ENST00000418310 H3BRN7 92 aa9.35□□□□□ -0.91
LIMK1-202ENST00000418310 ZNF207O43670 478 aaKnown RBP9.35□□□□□ -0.91
LIMK1-202ENST00000418310 AAMDCQ9H7C9 122 aa9.35□□□□□ -0.91
LIMK1-202ENST00000418310 AP5S1Q9NUS5 200 aa9.35□□□□□ -0.91
LIMK1-202ENST00000418310 PPP1R14DQ9NXH3 145 aa9.35□□□□□ -0.91
LIMK1-202ENST00000418310 RNF24Q9Y225 148 aa9.35□□□□□ -0.91
LIMK1-202ENST00000418310 ZFHX3Q15911 3703 aa9.34□□□□□ -0.91
LIMK1-202ENST00000418310 D6R8Y8 96 aa9.34□□□□□ -0.91
LIMK1-202ENST00000418310 PSG3Q16557 428 aa9.34□□□□□ -0.91
LIMK1-202ENST00000418310 TNFRSF14Q92956 283 aa9.34□□□□□ -0.91
LIMK1-202ENST00000418310 ZNF414Q96IQ9 312 aa9.34□□□□□ -0.91
LIMK1-202ENST00000418310 PLP1P60201 277 aa9.34□□□□□ -0.91
LIMK1-202ENST00000418310 TMEM191AQ9H0A3 160 aa9.34□□□□□ -0.91
LIMK1-202ENST00000418310 OR5AL1P0C617 328 aa9.33□□□□□ -0.92
LIMK1-202ENST00000418310 RIGQ13278 110 aa9.33□□□□□ -0.92
LIMK1-202ENST00000418310 LOC105371242A0A075B767 164 aa9.33□□□□□ -0.92
LIMK1-202ENST00000418310 VKORC1Q9BQB6 163 aa9.33□□□□□ -0.92
LIMK1-202ENST00000418310 C1RLQ9NZP8 487 aa9.33□□□□□ -0.92
LIMK1-202ENST00000418310 TMEM189A5PLL7 270 aa9.33□□□□□ -0.92
LIMK1-202ENST00000418310 UQCRFS1P47985 274 aa9.33□□□□□ -0.92
LIMK1-202ENST00000418310 C5orf64Q2M2E5 130 aa9.33□□□□□ -0.92
LIMK1-202ENST00000418310 ARPC1AQ92747 370 aa9.33□□□□□ -0.92
LIMK1-202ENST00000418310 C21orf62Q9NYP8 219 aa9.33□□□□□ -0.92
LIMK1-202ENST00000418310 IGHV3OR16-10A0A075B7F0 116 aa9.32□□□□□ -0.92
LIMK1-202ENST00000418310 SH2D1AO60880 128 aa9.32□□□□□ -0.92
LIMK1-202ENST00000418310 GPR183P32249 361 aa9.32□□□□□ -0.92
LIMK1-202ENST00000418310 CSN1S1P47710 185 aa9.32□□□□□ -0.92
LIMK1-202ENST00000418310 CT83Q5H943 113 aa9.32□□□□□ -0.92
LIMK1-202ENST00000418310 SLC25A34Q6PIV7 304 aa9.32□□□□□ -0.92
LIMK1-202ENST00000418310 C18orf15Q96N68 181 aa9.32□□□□□ -0.92
LIMK1-202ENST00000418310 FANCD2OSQ96PS1 177 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms