RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 ZNF738Q8NE65 137 aa11.06□□□□□ -0.64
NUP50-204ENST00000417702 OR11H7Q8NGC8 314 aa11.06□□□□□ -0.64
NUP50-204ENST00000417702 ASB13Q8WXK3 278 aa11.06□□□□□ -0.64
NUP50-204ENST00000417702 NEU1Q99519 415 aa11.06□□□□□ -0.64
NUP50-204ENST00000417702 SLC35B3Q9H1N7 401 aa11.06□□□□□ -0.64
NUP50-204ENST00000417702 GOLT1BQ9Y3E0 138 aa11.06□□□□□ -0.64
NUP50-204ENST00000417702 A0A087X0K7 114 aa11.05□□□□□ -0.64
NUP50-204ENST00000417702 NHLH2Q02577 135 aa11.05□□□□□ -0.64
NUP50-204ENST00000417702 VWC2Q2TAL6 325 aa11.05□□□□□ -0.64
NUP50-204ENST00000417702 C10orf113Q5VZT2 155 aa11.05□□□□□ -0.64
NUP50-204ENST00000417702 THAP6Q8TBB0 222 aa11.05□□□□□ -0.64
NUP50-204ENST00000417702 RNF126Q9BV68 326 aa11.05□□□□□ -0.64
NUP50-204ENST00000417702 MBD2Q9UBB5 411 aa11.05□□□□□ -0.64
NUP50-204ENST00000417702 WDR83OSQ9Y284 106 aa11.05□□□□□ -0.64
NUP50-204ENST00000417702 TRAV10A0A0B4J240 114 aa11.04□□□□□ -0.64
NUP50-204ENST00000417702 UBE2L5PA0A1B0GUS4 154 aa11.04□□□□□ -0.64
NUP50-204ENST00000417702 TMEM189A5PLL7 270 aa11.04□□□□□ -0.64
NUP50-204ENST00000417702 ZNF705FA8MVS1 300 aaPredicted RBP11.04□□□□□ -0.64
NUP50-204ENST00000417702 AMBPP02760 352 aa11.04□□□□□ -0.64
NUP50-204ENST00000417702 ZNF705DP0CH99 300 aaPredicted RBP11.04□□□□□ -0.64
NUP50-204ENST00000417702 ZNF705BP0CI00 300 aaPredicted RBP11.04□□□□□ -0.64
NUP50-204ENST00000417702 CNN1P51911 297 aaKnown RBP11.04□□□□□ -0.64
NUP50-204ENST00000417702 TCTAP57738 103 aa11.04□□□□□ -0.64
NUP50-204ENST00000417702 BPIFA4PQ86YQ2 179 aa11.04□□□□□ -0.64
NUP50-204ENST00000417702 OR5C1Q8NGR4 320 aa11.04□□□□□ -0.64
NUP50-204ENST00000417702 DNAJC4Q9NNZ3 241 aa11.04□□□□□ -0.64
NUP50-204ENST00000417702 RFNGQ9Y644 331 aa11.04□□□□□ -0.64
NUP50-204ENST00000417702 A8MTW9 85 aa11.03□□□□□ -0.64
NUP50-204ENST00000417702 GIPP09681 153 aaPredicted RBP11.03□□□□□ -0.64
NUP50-204ENST00000417702 CXCL2P19875 107 aa11.03□□□□□ -0.64
NUP50-204ENST00000417702 MIC13Q5XKP0 118 aa11.03□□□□□ -0.64
NUP50-204ENST00000417702 LCN15Q6UWW0 184 aa11.03□□□□□ -0.64
NUP50-204ENST00000417702 Q6ZTC4 211 aa11.03□□□□□ -0.64
NUP50-204ENST00000417702 OR1L4Q8NGR5 311 aa11.03□□□□□ -0.64
NUP50-204ENST00000417702 TMEM37Q8WXS4 190 aa11.03□□□□□ -0.64
NUP50-204ENST00000417702 IGLL5B9A064 214 aa11.02□□□□□ -0.65
NUP50-204ENST00000417702 MRPS12O15235 138 aaKnown RBP11.02□□□□□ -0.65
NUP50-204ENST00000417702 MPDU1O75352 247 aa11.02□□□□□ -0.65
NUP50-204ENST00000417702 HBE1P02100 147 aa11.02□□□□□ -0.65
NUP50-204ENST00000417702 RPL12P30050 165 aaKnown RBP11.02□□□□□ -0.65
NUP50-204ENST00000417702 RPL29P47914 159 aaKnown RBP11.02□□□□□ -0.65
NUP50-204ENST00000417702 EMP1P54849 157 aa11.02□□□□□ -0.65
NUP50-204ENST00000417702 B2MP61769 119 aa11.02□□□□□ -0.65
NUP50-204ENST00000417702 PRR20EP86478 221 aa11.02□□□□□ -0.65
NUP50-204ENST00000417702 PRR20CP86479 221 aa11.02□□□□□ -0.65
NUP50-204ENST00000417702 PRR20DP86480 221 aa11.02□□□□□ -0.65
NUP50-204ENST00000417702 PRR20BP86481 221 aa11.02□□□□□ -0.65
NUP50-204ENST00000417702 PRR20AP86496 221 aa11.02□□□□□ -0.65
NUP50-204ENST00000417702 PSG3Q16557 428 aa11.02□□□□□ -0.65
NUP50-204ENST00000417702 AMTNQ6UX39 209 aa11.02□□□□□ -0.65
NUP50-204ENST00000417702 IGF2BP2-AS1Q96M15 143 aa11.02□□□□□ -0.65
NUP50-204ENST00000417702 PFDN5Q99471 154 aa11.02□□□□□ -0.65
NUP50-204ENST00000417702 SLC50A1Q9BRV3 221 aa11.02□□□□□ -0.65
NUP50-204ENST00000417702 TMEM208Q9BTX3 173 aa11.02□□□□□ -0.65
NUP50-204ENST00000417702 PPP1R14DQ9NXH3 145 aa11.02□□□□□ -0.65
NUP50-204ENST00000417702 CELA1Q9UNI1 258 aa11.02□□□□□ -0.65
NUP50-204ENST00000417702 LYSTQ99698 3801 aa11.01□□□□□ -0.65
NUP50-204ENST00000417702 SPART-AS1P0CW21 52 aa11.01□□□□□ -0.65
NUP50-204ENST00000417702 FGF7P21781 194 aa11.01□□□□□ -0.65
NUP50-204ENST00000417702 RHOBP62745 196 aa11.01□□□□□ -0.65
NUP50-204ENST00000417702 HIST1H1AQ02539 215 aaPredicted RBP11.01□□□□□ -0.65
NUP50-204ENST00000417702 CLINT1Q14677 625 aa11.01□□□□□ -0.65
NUP50-204ENST00000417702 OPCMLQ14982 345 aa11.01□□□□□ -0.65
NUP50-204ENST00000417702 PLECQ15149 4684 aaKnown RBP11.01□□□□□ -0.65
NUP50-204ENST00000417702 C12orf74Q32Q52 190 aa11.01□□□□□ -0.65
NUP50-204ENST00000417702 LGALS9CQ6DKI2 356 aa11.01□□□□□ -0.65
NUP50-204ENST00000417702 C1orf158Q8N1D5 194 aa11.01□□□□□ -0.65
NUP50-204ENST00000417702 OR8A1Q8NGG7 326 aa11.01□□□□□ -0.65
NUP50-204ENST00000417702 SLC39A9Q9NUM3 307 aa11.01□□□□□ -0.65
NUP50-204ENST00000417702 HSPB11Q9Y547 144 aa11.01□□□□□ -0.65
NUP50-204ENST00000417702 DNAH1Q9P2D7 4330 aa11.01□□□□□ -0.65
NUP50-204ENST00000417702 TEX48A0A1B0GUV7 120 aa11□□□□□ -0.65
NUP50-204ENST00000417702 INSP01308 110 aa11□□□□□ -0.65
NUP50-204ENST00000417702 SPINK13Q1W4C9 94 aa11□□□□□ -0.65
NUP50-204ENST00000417702 RRN3P1Q2M238 152 aa11□□□□□ -0.65
NUP50-204ENST00000417702 ZNF767PQ75MW2 155 aa11□□□□□ -0.65
NUP50-204ENST00000417702 CHAC2Q8WUX2 184 aa11□□□□□ -0.65
NUP50-204ENST00000417702 RPUSD4Q96CM3 377 aaKnown RBP11□□□□□ -0.65
NUP50-204ENST00000417702 ZNF331Q9NQX6 463 aaPredicted RBP11□□□□□ -0.65
NUP50-204ENST00000417702 ALMS1Q8TCU4 4167 aa11□□□□□ -0.65
NUP50-204ENST00000417702 DEFB131BA0A096LNP1 70 aa10.99□□□□□ -0.65
NUP50-204ENST00000417702 BOLA2-SMG1P6H3BVE0 249 aa10.99□□□□□ -0.65
NUP50-204ENST00000417702 M0R2Z0 102 aa10.99□□□□□ -0.65
NUP50-204ENST00000417702 SNRPCP09234 159 aaKnown RBP10.99□□□□□ -0.65
NUP50-204ENST00000417702 MORN5Q5VZ52 161 aa10.99□□□□□ -0.65
NUP50-204ENST00000417702 ATP5SQ99766 215 aa10.99□□□□□ -0.65
NUP50-204ENST00000417702 NPCDR1Q9BY65 106 aa10.99□□□□□ -0.65
NUP50-204ENST00000417702 PXMP4Q9Y6I8 212 aa10.99□□□□□ -0.65
NUP50-204ENST00000417702 LOC102723971A0A1B0GUV8 181 aa10.98□□□□□ -0.65
NUP50-204ENST00000417702 IFNA5P01569 189 aa10.98□□□□□ -0.65
NUP50-204ENST00000417702 IGLC2P0DOY2 106 aa10.98□□□□□ -0.65
NUP50-204ENST00000417702 GUK1Q16774 197 aa10.98□□□□□ -0.65
NUP50-204ENST00000417702 OR2T35Q8NGX2 323 aa10.98□□□□□ -0.65
NUP50-204ENST00000417702 WDR61Q9GZS3 305 aaKnown RBP10.98□□□□□ -0.65
NUP50-204ENST00000417702 APLNQ9ULZ1 77 aa10.98□□□□□ -0.65
NUP50-204ENST00000417702 IGHV4-4A0A075B6R2 117 aa10.97□□□□□ -0.65
NUP50-204ENST00000417702 TRAV5A0A0B4J249 113 aa10.97□□□□□ -0.65
NUP50-204ENST00000417702 C17orf112F2Z3M2 114 aa10.97□□□□□ -0.65
NUP50-204ENST00000417702 H3BTX0 84 aa10.97□□□□□ -0.65
NUP50-204ENST00000417702 FAM222AQ5U5X8 452 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms