RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 RAB31Q13636 194 aa13.09□□□□□ -0.31
VPS16-204ENST00000417508 BOLA2-SMG1P6H3BVE0 249 aa13.08□□□□□ -0.32
VPS16-204ENST00000417508 MRPS12O15235 138 aaKnown RBP13.08□□□□□ -0.32
VPS16-204ENST00000417508 RHOBP62745 196 aa13.08□□□□□ -0.32
VPS16-204ENST00000417508 ARL16Q0P5N6 197 aa13.08□□□□□ -0.32
VPS16-204ENST00000417508 RNF212Q495C1 297 aa13.08□□□□□ -0.32
VPS16-204ENST00000417508 LCN15Q6UWW0 184 aa13.08□□□□□ -0.32
VPS16-204ENST00000417508 LINC00305Q7Z4B0 112 aa13.08□□□□□ -0.32
VPS16-204ENST00000417508 BPIFA4PQ86YQ2 179 aa13.08□□□□□ -0.32
VPS16-204ENST00000417508 ZNF431Q8TF32 576 aaPredicted RBP13.08□□□□□ -0.32
VPS16-204ENST00000417508 SLC50A1Q9BRV3 221 aa13.08□□□□□ -0.32
VPS16-204ENST00000417508 PLA2G2EQ9NZK7 142 aa13.08□□□□□ -0.32
VPS16-204ENST00000417508 DNAH10Q8IVF4 4471 aa13.07□□□□□ -0.32
VPS16-204ENST00000417508 DNAH6Q9C0G6 4158 aa13.07□□□□□ -0.32
VPS16-204ENST00000417508 ZNF705GA8MUZ8 300 aaPredicted RBP13.07□□□□□ -0.32
VPS16-204ENST00000417508 HIST1H1AQ02539 215 aaPredicted RBP13.07□□□□□ -0.32
VPS16-204ENST00000417508 LGALS9BQ3B8N2 356 aa13.07□□□□□ -0.32
VPS16-204ENST00000417508 CCDC32Q9BV29 185 aa13.07□□□□□ -0.32
VPS16-204ENST00000417508 C5orf51A6NDU8 294 aa13.06□□□□□ -0.32
VPS16-204ENST00000417508 FAM25EA8MYX2 175 aa13.06□□□□□ -0.32
VPS16-204ENST00000417508 COX7A2P2O60397 106 aa13.06□□□□□ -0.32
VPS16-204ENST00000417508 HTN3P15516 51 aa13.06□□□□□ -0.32
VPS16-204ENST00000417508 PVALBP20472 110 aaPredicted RBP13.06□□□□□ -0.32
VPS16-204ENST00000417508 BCAP31P51572 246 aa13.06□□□□□ -0.32
VPS16-204ENST00000417508 Q6ZRG5 221 aa13.06□□□□□ -0.32
VPS16-204ENST00000417508 LINC00299Q6ZSB3 139 aa13.06□□□□□ -0.32
VPS16-204ENST00000417508 UBE2DNLQ8IWF7 75 aa13.06□□□□□ -0.32
VPS16-204ENST00000417508 C12orf45Q8N5I9 185 aaPredicted RBP13.06□□□□□ -0.32
VPS16-204ENST00000417508 RPUSD4Q96CM3 377 aaKnown RBP13.06□□□□□ -0.32
VPS16-204ENST00000417508 C2orf50Q96LR7 162 aa13.06□□□□□ -0.32
VPS16-204ENST00000417508 DNAJC4Q9NNZ3 241 aa13.06□□□□□ -0.32
VPS16-204ENST00000417508 ZNF331Q9NQX6 463 aaPredicted RBP13.06□□□□□ -0.32
VPS16-204ENST00000417508 LSM5Q9Y4Y9 91 aaKnown RBP13.06□□□□□ -0.32
VPS16-204ENST00000417508 TRAV6A0A075B6T7 132 aa13.05□□□□□ -0.32
VPS16-204ENST00000417508 CCSO14618 274 aa13.05□□□□□ -0.32
VPS16-204ENST00000417508 CAMLGP49069 296 aa13.05□□□□□ -0.32
VPS16-204ENST00000417508 TAS2R60P59551 318 aa13.05□□□□□ -0.32
VPS16-204ENST00000417508 C10orf113Q5VZT2 155 aa13.05□□□□□ -0.32
VPS16-204ENST00000417508 BAP18Q8IXM2 172 aa13.05□□□□□ -0.32
VPS16-204ENST00000417508 C15orf53Q8NAA6 179 aa13.05□□□□□ -0.32
VPS16-204ENST00000417508 TMEM37Q8WXS4 190 aa13.05□□□□□ -0.32
VPS16-204ENST00000417508 LINC01587Q99440 93 aa13.05□□□□□ -0.32
VPS16-204ENST00000417508 MGST2Q99735 147 aa13.05□□□□□ -0.32
VPS16-204ENST00000417508 NUDT15Q9NV35 164 aa13.05□□□□□ -0.32
VPS16-204ENST00000417508 CDKN1BP46527 198 aa13.04□□□□□ -0.32
VPS16-204ENST00000417508 CAV2P51636 162 aa13.04□□□□□ -0.32
VPS16-204ENST00000417508 C20orf144Q9BQM9 153 aa13.04□□□□□ -0.32
VPS16-204ENST00000417508 PXMP4Q9Y6I8 212 aa13.04□□□□□ -0.32
VPS16-204ENST00000417508 TRAV12-2A0A075B6T6 113 aa13.03□□□□□ -0.32
VPS16-204ENST00000417508 H2AFB2P0C5Z0 115 aa13.03□□□□□ -0.32
VPS16-204ENST00000417508 S100A11P31949 105 aa13.03□□□□□ -0.32
VPS16-204ENST00000417508 FAM3BP58499 235 aaPredicted RBP13.03□□□□□ -0.32
VPS16-204ENST00000417508 GUK1Q16774 197 aa13.03□□□□□ -0.32
VPS16-204ENST00000417508 ZNF493Q6ZR52 646 aa13.03□□□□□ -0.32
VPS16-204ENST00000417508 NRARPQ7Z6K4 114 aa13.03□□□□□ -0.32
VPS16-204ENST00000417508 OR1L4Q8NGR5 311 aa13.03□□□□□ -0.32
VPS16-204ENST00000417508 CHAC2Q8WUX2 184 aa13.03□□□□□ -0.32
VPS16-204ENST00000417508 SEC22CQ9BRL7 303 aa13.03□□□□□ -0.32
VPS16-204ENST00000417508 C11orf1Q9H5F2 150 aa13.03□□□□□ -0.32
VPS16-204ENST00000417508 UQCC1Q9NVA1 299 aa13.03□□□□□ -0.32
VPS16-204ENST00000417508 FAM240BA0A1B0GVZ2 78 aa13.02□□□□□ -0.33
VPS16-204ENST00000417508 CST7O76096 145 aa13.02□□□□□ -0.33
VPS16-204ENST00000417508 AZU1P20160 251 aa13.02□□□□□ -0.33
VPS16-204ENST00000417508 IL15RAQ13261 267 aa13.02□□□□□ -0.33
VPS16-204ENST00000417508 VWC2Q2TAL6 325 aa13.02□□□□□ -0.33
VPS16-204ENST00000417508 MZT2BQ6NZ67 158 aa13.02□□□□□ -0.33
VPS16-204ENST00000417508 TMEM88Q6PEY1 159 aa13.02□□□□□ -0.33
VPS16-204ENST00000417508 OR10J6PQ8NGY7 276 aa13.02□□□□□ -0.33
VPS16-204ENST00000417508 C16orf74Q96GX8 76 aa13.02□□□□□ -0.33
VPS16-204ENST00000417508 PFDN5Q99471 154 aa13.02□□□□□ -0.33
VPS16-204ENST00000417508 WDR83OSQ9Y284 106 aa13.02□□□□□ -0.33
VPS16-204ENST00000417508 FAM24AA6NFZ4 105 aa13.01□□□□□ -0.33
VPS16-204ENST00000417508 CBY3A6NI87 242 aa13.01□□□□□ -0.33
VPS16-204ENST00000417508 PRM2P04554 102 aa13.01□□□□□ -0.33
VPS16-204ENST00000417508 DEFB130BP0DP73 79 aa13.01□□□□□ -0.33
VPS16-204ENST00000417508 DEFB130AP0DP74 79 aa13.01□□□□□ -0.33
VPS16-204ENST00000417508 RPL29P47914 159 aaKnown RBP13.01□□□□□ -0.33
VPS16-204ENST00000417508 SULT1A1P50225 295 aa13.01□□□□□ -0.33
VPS16-204ENST00000417508 HBG1P69891 147 aa13.01□□□□□ -0.33
VPS16-204ENST00000417508 HBG2P69892 147 aa13.01□□□□□ -0.33
VPS16-204ENST00000417508 OPCMLQ14982 345 aa13.01□□□□□ -0.33
VPS16-204ENST00000417508 ATP6V1FQ16864 119 aa13.01□□□□□ -0.33
VPS16-204ENST00000417508 SAT2Q96F10 170 aaPredicted RBP13.01□□□□□ -0.33
VPS16-204ENST00000417508 LYRM2Q9NU23 88 aaPredicted RBP13.01□□□□□ -0.33
VPS16-204ENST00000417508 TIMM8BQ9Y5J9 83 aaPredicted RBP13.01□□□□□ -0.33
VPS16-204ENST00000417508 PLAC8L1A1L4L8 177 aa13□□□□□ -0.33
VPS16-204ENST00000417508 H7BYZ3 331 aa13□□□□□ -0.33
VPS16-204ENST00000417508 M0R2N4 97 aa13□□□□□ -0.33
VPS16-204ENST00000417508 ATP5G1P05496 136 aa13□□□□□ -0.33
VPS16-204ENST00000417508 IGLC2P0DOY2 106 aa13□□□□□ -0.33
VPS16-204ENST00000417508 ATP5G3P48201 142 aa13□□□□□ -0.33
VPS16-204ENST00000417508 MIC13Q5XKP0 118 aa13□□□□□ -0.33
VPS16-204ENST00000417508 Q6ZR54 194 aa13□□□□□ -0.33
VPS16-204ENST00000417508 STX12Q86Y82 276 aa13□□□□□ -0.33
VPS16-204ENST00000417508 S100ZQ8WXG8 99 aa13□□□□□ -0.33
VPS16-204ENST00000417508 ZNF253O75346 499 aa12.99□□□□□ -0.33
VPS16-204ENST00000417508 TMEM252Q8N6L7 170 aa12.99□□□□□ -0.33
VPS16-204ENST00000417508 NACAE9PAV3 2078 aa12.98□□□□□ -0.33
VPS16-204ENST00000417508 PRSS29PA6NIE9 313 aa12.98□□□□□ -0.33
VPS16-204ENST00000417508 H3BQ15 152 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms