RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 hCG_2014768A0A024R1R8 64 aa13.07□□□□□ -0.32
VCP-202ENST00000417448 GALR1P47211 349 aa13.07□□□□□ -0.32
VCP-202ENST00000417448 UBE2CO00762 179 aa13.06□□□□□ -0.32
VCP-202ENST00000417448 SOCS3O14543 225 aa13.06□□□□□ -0.32
VCP-202ENST00000417448 EIF3GO75821 320 aaKnown RBP eCLIP13.06□□□□□ -0.32
VCP-202ENST00000417448 IFNA5P01569 189 aa13.06□□□□□ -0.32
VCP-202ENST00000417448 HLA-DMBP28068 263 aa13.06□□□□□ -0.32
VCP-202ENST00000417448 CMC4P56277 68 aaPredicted RBP13.06□□□□□ -0.32
VCP-202ENST00000417448 ACTL10Q5JWF8 245 aa13.06□□□□□ -0.32
VCP-202ENST00000417448 PXDC1Q5TGL8 231 aa13.06□□□□□ -0.32
VCP-202ENST00000417448 Q6ZNX1 250 aa13.06□□□□□ -0.32
VCP-202ENST00000417448 RNF182Q8N6D2 247 aa13.06□□□□□ -0.32
VCP-202ENST00000417448 SCGB1C1Q8TD33 95 aa13.06□□□□□ -0.32
VCP-202ENST00000417448 C16orf92Q96LL3 132 aa13.06□□□□□ -0.32
VCP-202ENST00000417448 APLNQ9ULZ1 77 aa13.06□□□□□ -0.32
VCP-202ENST00000417448 RNF222A6NCQ9 220 aa13.05□□□□□ -0.32
VCP-202ENST00000417448 MRPS12O15235 138 aaKnown RBP13.05□□□□□ -0.32
VCP-202ENST00000417448 MPDU1O75352 247 aa13.05□□□□□ -0.32
VCP-202ENST00000417448 GDF5OSQ5U4N7 250 aa13.05□□□□□ -0.32
VCP-202ENST00000417448 ZNF709Q8N972 641 aa13.05□□□□□ -0.32
VCP-202ENST00000417448 OR1L4Q8NGR5 311 aa13.05□□□□□ -0.32
VCP-202ENST00000417448 AQP10Q96PS8 301 aa13.05□□□□□ -0.32
VCP-202ENST00000417448 TNFSF18Q9UNG2 199 aa13.05□□□□□ -0.32
VCP-202ENST00000417448 ELOA3CA0A087WX78 387 aaPredicted RBP13.04□□□□□ -0.32
VCP-202ENST00000417448 TRAV8-2A0A0B4J237 113 aa13.04□□□□□ -0.32
VCP-202ENST00000417448 F6UB75 175 aa13.04□□□□□ -0.32
VCP-202ENST00000417448 SNRPD3P62318 126 aaKnown RBP13.04□□□□□ -0.32
VCP-202ENST00000417448 FFAR4Q5NUL3 377 aa13.04□□□□□ -0.32
VCP-202ENST00000417448 C2CD4CQ8TF44 421 aa13.04□□□□□ -0.32
VCP-202ENST00000417448 ASB13Q8WXK3 278 aa13.04□□□□□ -0.32
VCP-202ENST00000417448 HERC1Q15751 4861 aa13.04□□□□□ -0.32
VCP-202ENST00000417448 KIR2DL5BA0A0G2JN68 375 aa13.03□□□□□ -0.32
VCP-202ENST00000417448 KIR2DL5BA0A0G2JPC4 375 aa13.03□□□□□ -0.32
VCP-202ENST00000417448 PRSS29PA6NIE9 313 aa13.03□□□□□ -0.32
VCP-202ENST00000417448 RTL8CO15255 209 aa13.03□□□□□ -0.32
VCP-202ENST00000417448 IGKV3-20P01619 116 aa13.03□□□□□ -0.32
VCP-202ENST00000417448 RPL7P18124 248 aaKnown RBP13.03□□□□□ -0.32
VCP-202ENST00000417448 MIR17HGQ75NE6 70 aa13.03□□□□□ -0.32
VCP-202ENST00000417448 KIR2DL5AQ8N109 375 aa13.03□□□□□ -0.32
VCP-202ENST00000417448 HSD17B11Q8NBQ5 300 aa13.03□□□□□ -0.32
VCP-202ENST00000417448 INO80EQ8NBZ0 244 aaPredicted RBP13.03□□□□□ -0.32
VCP-202ENST00000417448 OR11H4Q8NGC9 324 aa13.03□□□□□ -0.32
VCP-202ENST00000417448 KIR2DL5BQ8NHK3 375 aa13.03□□□□□ -0.32
VCP-202ENST00000417448 C11orf45Q8TAV5 145 aa13.03□□□□□ -0.32
VCP-202ENST00000417448 GPR82Q96P67 336 aa13.03□□□□□ -0.32
VCP-202ENST00000417448 SEPSECSQ9HD40 501 aaKnown RBP13.03□□□□□ -0.32
VCP-202ENST00000417448 PLA2G2EQ9NZK7 142 aa13.03□□□□□ -0.32
VCP-202ENST00000417448 H3BQ15 152 aa13.02□□□□□ -0.33
VCP-202ENST00000417448 ARPC5O15511 151 aa13.02□□□□□ -0.33
VCP-202ENST00000417448 S100A7P31151 101 aa13.02□□□□□ -0.33
VCP-202ENST00000417448 ID1P41134 155 aa13.02□□□□□ -0.33
VCP-202ENST00000417448 TCTAP57738 103 aa13.02□□□□□ -0.33
VCP-202ENST00000417448 FAM78BQ5VT40 261 aa13.02□□□□□ -0.33
VCP-202ENST00000417448 STHQ8IWL8 128 aa13.02□□□□□ -0.33
VCP-202ENST00000417448 PFDN5Q99471 154 aa13.02□□□□□ -0.33
VCP-202ENST00000417448 C17orf112F2Z3M2 114 aa13.01□□□□□ -0.33
VCP-202ENST00000417448 SLC17A3O00476 420 aa13.01□□□□□ -0.33
VCP-202ENST00000417448 ZNF705DP0CH99 300 aaPredicted RBP13.01□□□□□ -0.33
VCP-202ENST00000417448 ZNF705BP0CI00 300 aaPredicted RBP13.01□□□□□ -0.33
VCP-202ENST00000417448 PYYP10082 97 aa13.01□□□□□ -0.33
VCP-202ENST00000417448 PSMB3P49720 205 aa13.01□□□□□ -0.33
VCP-202ENST00000417448 RPL7L1Q6DKI1 246 aaKnown RBP13.01□□□□□ -0.33
VCP-202ENST00000417448 LRRC20Q8TCA0 184 aa13.01□□□□□ -0.33
VCP-202ENST00000417448 MFFQ9GZY8 342 aa13.01□□□□□ -0.33
VCP-202ENST00000417448 A0A1B0GVG6 124 aa13□□□□□ -0.33
VCP-202ENST00000417448 ISLRO14498 428 aa13□□□□□ -0.33
VCP-202ENST00000417448 FXYD7P58549 80 aa13□□□□□ -0.33
VCP-202ENST00000417448 S100A7AQ86SG5 101 aa13□□□□□ -0.33
VCP-202ENST00000417448 TRPT1Q86TN4 253 aaKnown RBP13□□□□□ -0.33
VCP-202ENST00000417448 ZNF575Q86XF7 245 aa13□□□□□ -0.33
VCP-202ENST00000417448 BPIFA4PQ86YQ2 179 aa13□□□□□ -0.33
VCP-202ENST00000417448 ST6GAL2Q96JF0 529 aa13□□□□□ -0.33
VCP-202ENST00000417448 SLC25A2Q9BXI2 301 aa13□□□□□ -0.33
VCP-202ENST00000417448 CSTL1Q9H114 145 aa13□□□□□ -0.33
VCP-202ENST00000417448 A0A087X0K7 114 aa12.99□□□□□ -0.33
VCP-202ENST00000417448 IGLL5B9A064 214 aa12.99□□□□□ -0.33
VCP-202ENST00000417448 MEOX2P50222 304 aa12.99□□□□□ -0.33
VCP-202ENST00000417448 RAB2AP61019 212 aa12.99□□□□□ -0.33
VCP-202ENST00000417448 FAM167A-AS1Q96KT0 104 aa12.99□□□□□ -0.33
VCP-202ENST00000417448 PARD6GQ9BYG4 376 aaPredicted RBP12.99□□□□□ -0.33
VCP-202ENST00000417448 SH3BGRL3Q9H299 93 aa12.99□□□□□ -0.33
VCP-202ENST00000417448 C11orf68Q9H3H3 251 aaKnown RBP12.99□□□□□ -0.33
VCP-202ENST00000417448 ZNF586Q9NXT0 402 aa12.99□□□□□ -0.33
VCP-202ENST00000417448 ZNF705FA8MVS1 300 aaPredicted RBP12.98□□□□□ -0.33
VCP-202ENST00000417448 H3BMM0 161 aa12.98□□□□□ -0.33
VCP-202ENST00000417448 CA1P00915 261 aaPredicted RBP12.98□□□□□ -0.33
VCP-202ENST00000417448 GIG44P09565 113 aaPredicted RBP12.98□□□□□ -0.33
VCP-202ENST00000417448 IGLC2P0DOY2 106 aa12.98□□□□□ -0.33
VCP-202ENST00000417448 C4BPBP20851 252 aa12.98□□□□□ -0.33
VCP-202ENST00000417448 ATP6V0CP27449 155 aa12.98□□□□□ -0.33
VCP-202ENST00000417448 OR4B1Q8NGF8 309 aa12.98□□□□□ -0.33
VCP-202ENST00000417448 BLNKQ8WV28 456 aa12.98□□□□□ -0.33
VCP-202ENST00000417448 CLEC5AQ9NY25 188 aa12.98□□□□□ -0.33
VCP-202ENST00000417448 DEFB4AO15263 64 aa12.97□□□□□ -0.33
VCP-202ENST00000417448 FAM122CQ6P4D5 195 aa12.97□□□□□ -0.33
VCP-202ENST00000417448 ZNF738Q8NE65 137 aa12.97□□□□□ -0.33
VCP-202ENST00000417448 RARRES2Q99969 163 aa12.97□□□□□ -0.33
VCP-202ENST00000417448 SAV1Q9H4B6 383 aaPredicted RBP12.97□□□□□ -0.33
VCP-202ENST00000417448 KCNIP2Q9NS61 270 aa12.97□□□□□ -0.33
VCP-202ENST00000417448 RPRMQ9NS64 109 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms