RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 MRPS12O15235 138 aaKnown RBP12.5□□□□□ -0.41
PDLIM2-208ENST00000416159 CXCL2P19875 107 aa12.5□□□□□ -0.41
PDLIM2-208ENST00000416159 DAD1P61803 113 aa12.5□□□□□ -0.41
PDLIM2-208ENST00000416159 RHOBP62745 196 aa12.5□□□□□ -0.41
PDLIM2-208ENST00000416159 HIST1H1AQ02539 215 aaPredicted RBP12.5□□□□□ -0.41
PDLIM2-208ENST00000416159 LINC00305Q7Z4B0 112 aa12.5□□□□□ -0.41
PDLIM2-208ENST00000416159 ZNF431Q8TF32 576 aaPredicted RBP12.5□□□□□ -0.41
PDLIM2-208ENST00000416159 PPP1R14DQ9NXH3 145 aa12.5□□□□□ -0.41
PDLIM2-208ENST00000416159 LSM5Q9Y4Y9 91 aaKnown RBP12.5□□□□□ -0.41
PDLIM2-208ENST00000416159 TRAV6A0A075B6T7 132 aa12.49□□□□□ -0.41
PDLIM2-208ENST00000416159 C5orf51A6NDU8 294 aa12.49□□□□□ -0.41
PDLIM2-208ENST00000416159 ZNF705GA8MUZ8 300 aaPredicted RBP12.49□□□□□ -0.41
PDLIM2-208ENST00000416159 HTN3P15516 51 aa12.49□□□□□ -0.41
PDLIM2-208ENST00000416159 BCAP31P51572 246 aa12.49□□□□□ -0.41
PDLIM2-208ENST00000416159 LINC00336Q6ZUF6 198 aa12.49□□□□□ -0.41
PDLIM2-208ENST00000416159 LYRM9A8MSI8 78 aa12.48□□□□□ -0.41
PDLIM2-208ENST00000416159 COX7A2P2O60397 106 aa12.48□□□□□ -0.41
PDLIM2-208ENST00000416159 TSPOP30536 169 aa12.48□□□□□ -0.41
PDLIM2-208ENST00000416159 RAB31Q13636 194 aa12.48□□□□□ -0.41
PDLIM2-208ENST00000416159 LCN15Q6UWW0 184 aa12.48□□□□□ -0.41
PDLIM2-208ENST00000416159 BPIFA4PQ86YQ2 179 aa12.48□□□□□ -0.41
PDLIM2-208ENST00000416159 BAP18Q8IXM2 172 aa12.48□□□□□ -0.41
PDLIM2-208ENST00000416159 C12orf45Q8N5I9 185 aaPredicted RBP12.48□□□□□ -0.41
PDLIM2-208ENST00000416159 C2orf50Q96LR7 162 aa12.48□□□□□ -0.41
PDLIM2-208ENST00000416159 MGST2Q99735 147 aa12.48□□□□□ -0.41
PDLIM2-208ENST00000416159 SEC22CQ9BRL7 303 aa12.48□□□□□ -0.41
PDLIM2-208ENST00000416159 SLC50A1Q9BRV3 221 aa12.48□□□□□ -0.41
PDLIM2-208ENST00000416159 CCDC32Q9BV29 185 aa12.48□□□□□ -0.41
PDLIM2-208ENST00000416159 NUDT15Q9NV35 164 aa12.48□□□□□ -0.41
PDLIM2-208ENST00000416159 PVALBP20472 110 aaPredicted RBP12.47□□□□□ -0.41
PDLIM2-208ENST00000416159 CAV2P51636 162 aa12.47□□□□□ -0.41
PDLIM2-208ENST00000416159 UBE2DNLQ8IWF7 75 aa12.47□□□□□ -0.41
PDLIM2-208ENST00000416159 TMEM256Q8N2U0 113 aa12.47□□□□□ -0.41
PDLIM2-208ENST00000416159 TMEM37Q8WXS4 190 aa12.47□□□□□ -0.41
PDLIM2-208ENST00000416159 RPUSD4Q96CM3 377 aaKnown RBP12.47□□□□□ -0.41
PDLIM2-208ENST00000416159 LINC01587Q99440 93 aa12.47□□□□□ -0.41
PDLIM2-208ENST00000416159 ZNF331Q9NQX6 463 aaPredicted RBP12.47□□□□□ -0.41
PDLIM2-208ENST00000416159 TRAV12-2A0A075B6T6 113 aa12.46□□□□□ -0.41
PDLIM2-208ENST00000416159 FAM24AA6NFZ4 105 aa12.46□□□□□ -0.41
PDLIM2-208ENST00000416159 H2AFB2P0C5Z0 115 aa12.46□□□□□ -0.41
PDLIM2-208ENST00000416159 CAMLGP49069 296 aa12.46□□□□□ -0.41
PDLIM2-208ENST00000416159 C10orf113Q5VZT2 155 aa12.46□□□□□ -0.41
PDLIM2-208ENST00000416159 Q6ZRG5 221 aa12.46□□□□□ -0.41
PDLIM2-208ENST00000416159 C11orf1Q9H5F2 150 aa12.46□□□□□ -0.41
PDLIM2-208ENST00000416159 DNAJC4Q9NNZ3 241 aa12.46□□□□□ -0.41
PDLIM2-208ENST00000416159 PRM2P04554 102 aa12.45□□□□□ -0.42
PDLIM2-208ENST00000416159 CDKN1BP46527 198 aa12.45□□□□□ -0.42
PDLIM2-208ENST00000416159 LGALS9BQ3B8N2 356 aa12.45□□□□□ -0.42
PDLIM2-208ENST00000416159 RNF212Q495C1 297 aa12.45□□□□□ -0.42
PDLIM2-208ENST00000416159 NRARPQ7Z6K4 114 aa12.45□□□□□ -0.42
PDLIM2-208ENST00000416159 FAM240BA0A1B0GVZ2 78 aa12.44□□□□□ -0.42
PDLIM2-208ENST00000416159 M0R2N4 97 aa12.44□□□□□ -0.42
PDLIM2-208ENST00000416159 CST7O76096 145 aa12.44□□□□□ -0.42
PDLIM2-208ENST00000416159 AZU1P20160 251 aa12.44□□□□□ -0.42
PDLIM2-208ENST00000416159 TAS2R60P59551 318 aa12.44□□□□□ -0.42
PDLIM2-208ENST00000416159 OPCMLQ14982 345 aa12.44□□□□□ -0.42
PDLIM2-208ENST00000416159 TMEM88Q6PEY1 159 aa12.44□□□□□ -0.42
PDLIM2-208ENST00000416159 LINC00299Q6ZSB3 139 aa12.44□□□□□ -0.42
PDLIM2-208ENST00000416159 C15orf53Q8NAA6 179 aa12.44□□□□□ -0.42
PDLIM2-208ENST00000416159 OR1L4Q8NGR5 311 aa12.44□□□□□ -0.42
PDLIM2-208ENST00000416159 UQCC1Q9NVA1 299 aa12.44□□□□□ -0.42
PDLIM2-208ENST00000416159 WDR83OSQ9Y284 106 aa12.44□□□□□ -0.42
PDLIM2-208ENST00000416159 PXMP4Q9Y6I8 212 aa12.44□□□□□ -0.42
PDLIM2-208ENST00000416159 SNRPCP09234 159 aaKnown RBP12.43□□□□□ -0.42
PDLIM2-208ENST00000416159 S100A11P31949 105 aa12.43□□□□□ -0.42
PDLIM2-208ENST00000416159 MIC13Q5XKP0 118 aa12.43□□□□□ -0.42
PDLIM2-208ENST00000416159 MZT2BQ6NZ67 158 aa12.43□□□□□ -0.42
PDLIM2-208ENST00000416159 PFDN5Q99471 154 aa12.43□□□□□ -0.42
PDLIM2-208ENST00000416159 LYRM2Q9NU23 88 aaPredicted RBP12.43□□□□□ -0.42
PDLIM2-208ENST00000416159 PLAC8L1A1L4L8 177 aa12.42□□□□□ -0.42
PDLIM2-208ENST00000416159 IGLC2P0DOY2 106 aa12.42□□□□□ -0.42
PDLIM2-208ENST00000416159 DEFB130BP0DP73 79 aa12.42□□□□□ -0.42
PDLIM2-208ENST00000416159 DEFB130AP0DP74 79 aa12.42□□□□□ -0.42
PDLIM2-208ENST00000416159 SULT1A1P50225 295 aa12.42□□□□□ -0.42
PDLIM2-208ENST00000416159 S100A10P60903 97 aa12.42□□□□□ -0.42
PDLIM2-208ENST00000416159 IL15RAQ13261 267 aa12.42□□□□□ -0.42
PDLIM2-208ENST00000416159 VWC2Q2TAL6 325 aa12.42□□□□□ -0.42
PDLIM2-208ENST00000416159 MORN5Q5VZ52 161 aa12.42□□□□□ -0.42
PDLIM2-208ENST00000416159 TMEM252Q8N6L7 170 aa12.42□□□□□ -0.42
PDLIM2-208ENST00000416159 OR10J6PQ8NGY7 276 aa12.42□□□□□ -0.42
PDLIM2-208ENST00000416159 C16orf74Q96GX8 76 aa12.42□□□□□ -0.42
PDLIM2-208ENST00000416159 C20orf144Q9BQM9 153 aa12.42□□□□□ -0.42
PDLIM2-208ENST00000416159 H3BTX0 84 aa12.41□□□□□ -0.42
PDLIM2-208ENST00000416159 SLC17A3O00476 420 aa12.41□□□□□ -0.42
PDLIM2-208ENST00000416159 PRB4P10163 310 aaPredicted RBP12.41□□□□□ -0.42
PDLIM2-208ENST00000416159 RPL29P47914 159 aaKnown RBP12.41□□□□□ -0.42
PDLIM2-208ENST00000416159 HBG1P69891 147 aa12.41□□□□□ -0.42
PDLIM2-208ENST00000416159 HBG2P69892 147 aa12.41□□□□□ -0.42
PDLIM2-208ENST00000416159 RAB32Q13637 225 aa12.41□□□□□ -0.42
PDLIM2-208ENST00000416159 GUK1Q16774 197 aa12.41□□□□□ -0.42
PDLIM2-208ENST00000416159 ATP6V1FQ16864 119 aa12.41□□□□□ -0.42
PDLIM2-208ENST00000416159 ZNF493Q6ZR52 646 aa12.41□□□□□ -0.42
PDLIM2-208ENST00000416159 STX12Q86Y82 276 aa12.41□□□□□ -0.42
PDLIM2-208ENST00000416159 CHAC2Q8WUX2 184 aa12.41□□□□□ -0.42
PDLIM2-208ENST00000416159 S100ZQ8WXG8 99 aa12.41□□□□□ -0.42
PDLIM2-208ENST00000416159 SAT2Q96F10 170 aaPredicted RBP12.41□□□□□ -0.42
PDLIM2-208ENST00000416159 TIMM8BQ9Y5J9 83 aaPredicted RBP12.41□□□□□ -0.42
PDLIM2-208ENST00000416159 CBY3A6NI87 242 aa12.4□□□□□ -0.42
PDLIM2-208ENST00000416159 H3BQ15 152 aa12.4□□□□□ -0.42
PDLIM2-208ENST00000416159 H7BYZ3 331 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms