RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 HTR1DP28221 377 aa7.74□□□□□ -1.17
CD44-206ENST00000415148 RHOGP84095 191 aa7.74□□□□□ -1.17
CD44-206ENST00000415148 LOXL1Q08397 574 aaPredicted RBP7.74□□□□□ -1.17
CD44-206ENST00000415148 PSG3Q16557 428 aa7.74□□□□□ -1.17
CD44-206ENST00000415148 SLC25A34Q6PIV7 304 aa7.74□□□□□ -1.17
CD44-206ENST00000415148 PIP4P2Q8N4L2 257 aa7.74□□□□□ -1.17
CD44-206ENST00000415148 NEU4Q8WWR8 484 aaPredicted RBP7.74□□□□□ -1.17
CD44-206ENST00000415148 C17orf77Q96MU5 243 aa7.74□□□□□ -1.17
CD44-206ENST00000415148 PSG8Q9UQ74 426 aa7.74□□□□□ -1.17
CD44-206ENST00000415148 MALRD1Q5VYJ5 2156 aa7.74□□□□□ -1.17
CD44-206ENST00000415148 CNOT1A5YKK6 2376 aaKnown RBP7.73□□□□□ -1.17
CD44-206ENST00000415148 EP300Q09472 2414 aaPredicted RBP7.73□□□□□ -1.17
CD44-206ENST00000415148 PPIAL4CA0A0B4J2A2 164 aa7.73□□□□□ -1.17
CD44-206ENST00000415148 SERTM2A0A1B0GWG4 89 aa7.73□□□□□ -1.17
CD44-206ENST00000415148 WI2-2373I1.2A0A1W2PRP0 233 aa7.73□□□□□ -1.17
CD44-206ENST00000415148 K7EIM0 57 aa7.73□□□□□ -1.17
CD44-206ENST00000415148 PPIAL4GP0DN37 164 aa7.73□□□□□ -1.17
CD44-206ENST00000415148 FXYD7P58549 80 aa7.73□□□□□ -1.17
CD44-206ENST00000415148 TCF15Q12870 199 aa7.73□□□□□ -1.17
CD44-206ENST00000415148 LINC01545Q5VT33 79 aa7.73□□□□□ -1.17
CD44-206ENST00000415148 C12orf54Q6X4T0 127 aa7.73□□□□□ -1.17
CD44-206ENST00000415148 SIGLEC15Q6ZMC9 328 aa7.73□□□□□ -1.17
CD44-206ENST00000415148 ZNF493Q6ZR52 646 aa7.73□□□□□ -1.17
CD44-206ENST00000415148 C2orf91Q6ZV80 131 aa7.73□□□□□ -1.17
CD44-206ENST00000415148 ZNF491Q8N8L2 437 aa7.73□□□□□ -1.17
CD44-206ENST00000415148 POLEQ07864 2286 aa7.73□□□□□ -1.17
CD44-206ENST00000415148 ARMS2P0C7Q2 107 aa7.73□□□□□ -1.17
CD44-206ENST00000415148 S100A7P31151 101 aa7.73□□□□□ -1.17
CD44-206ENST00000415148 PSG9Q00887 426 aa7.73□□□□□ -1.17
CD44-206ENST00000415148 PDE6HQ13956 83 aa7.73□□□□□ -1.17
CD44-206ENST00000415148 PLGLAQ15195 96 aa7.73□□□□□ -1.17
CD44-206ENST00000415148 DEFB125Q8N687 156 aa7.73□□□□□ -1.17
CD44-206ENST00000415148 IGFBPL1Q8WX77 278 aa7.73□□□□□ -1.17
CD44-206ENST00000415148 ZNF414Q96IQ9 312 aa7.73□□□□□ -1.17
CD44-206ENST00000415148 ZNF48Q96MX3 618 aaPredicted RBP7.73□□□□□ -1.17
CD44-206ENST00000415148 RAB1BQ9H0U4 201 aa7.73□□□□□ -1.17
CD44-206ENST00000415148 CST9LQ9H4G1 147 aa7.73□□□□□ -1.17
CD44-206ENST00000415148 RELNP78509 3460 aa7.72□□□□□ -1.17
CD44-206ENST00000415148 OTOGLQ3ZCN5 2332 aa7.72□□□□□ -1.17
CD44-206ENST00000415148 MRPS12O15235 138 aaKnown RBP7.72□□□□□ -1.17
CD44-206ENST00000415148 CNIH1O95406 144 aa7.72□□□□□ -1.17
CD44-206ENST00000415148 CD3EP07766 207 aa7.72□□□□□ -1.17
CD44-206ENST00000415148 SAPCD1Q5SSQ6 148 aa7.72□□□□□ -1.17
CD44-206ENST00000415148 NPBQ8NG41 125 aa7.72□□□□□ -1.17
CD44-206ENST00000415148 ABHD17AQ96GS6 310 aa7.72□□□□□ -1.17
CD44-206ENST00000415148 NAA38Q9BRA0 125 aaKnown RBP7.72□□□□□ -1.17
CD44-206ENST00000415148 AP5S1Q9NUS5 200 aa7.72□□□□□ -1.17
CD44-206ENST00000415148 FBLL1A6NHQ2 334 aaKnown RBP7.71□□□□□ -1.17
CD44-206ENST00000415148 CSN1S1P47710 185 aa7.71□□□□□ -1.17
CD44-206ENST00000415148 RPS20P60866 119 aaKnown RBP7.71□□□□□ -1.17
CD44-206ENST00000415148 COX8CQ7Z4L0 72 aa7.71□□□□□ -1.17
CD44-206ENST00000415148 Q8NA96 180 aa7.71□□□□□ -1.17
CD44-206ENST00000415148 LY6G5BQ8NDX9 201 aa7.71□□□□□ -1.17
CD44-206ENST00000415148 DPF1Q92782 380 aa7.71□□□□□ -1.17
CD44-206ENST00000415148 RNF125Q96EQ8 232 aa7.71□□□□□ -1.17
CD44-206ENST00000415148 BCL6BQ8N143 479 aaPredicted RBP7.71□□□□□ -1.18
CD44-206ENST00000415148 OR10AG1Q8NH19 301 aa7.71□□□□□ -1.18
CD44-206ENST00000415148 A0A096LNJ9 63 aa7.7□□□□□ -1.18
CD44-206ENST00000415148 NDUFA3O95167 84 aa7.7□□□□□ -1.18
CD44-206ENST00000415148 UQCRFS1P47985 274 aa7.7□□□□□ -1.18
CD44-206ENST00000415148 CRIP1P50238 77 aa7.7□□□□□ -1.18
CD44-206ENST00000415148 ARF6P62330 175 aa7.7□□□□□ -1.18
CD44-206ENST00000415148 OCIAD2Q56VL3 154 aa7.7□□□□□ -1.18
CD44-206ENST00000415148 OR11H6Q8NGC7 330 aa7.7□□□□□ -1.18
CD44-206ENST00000415148 PRSS3P2Q8NHM4 247 aa7.7□□□□□ -1.18
CD44-206ENST00000415148 ZNF747Q9BV97 191 aa7.7□□□□□ -1.18
CD44-206ENST00000415148 AAMDCQ9H7C9 122 aa7.7□□□□□ -1.18
CD44-206ENST00000415148 U3KQK5 164 aa7.7□□□□□ -1.18
CD44-206ENST00000415148 TPRP12270 2363 aaKnown RBP7.7□□□□□ -1.18
CD44-206ENST00000415148 NBR2O15453 112 aa7.7□□□□□ -1.18
CD44-206ENST00000415148 SAP30O75446 220 aa7.7□□□□□ -1.18
CD44-206ENST00000415148 CT45A10P0DMU9 189 aa7.7□□□□□ -1.18
CD44-206ENST00000415148 COX7A1P24310 79 aa7.7□□□□□ -1.18
CD44-206ENST00000415148 CEACAM3P40198 252 aa7.7□□□□□ -1.18
CD44-206ENST00000415148 HIST1H1AQ02539 215 aaPredicted RBP7.7□□□□□ -1.18
CD44-206ENST00000415148 FA2HQ7L5A8 372 aa7.7□□□□□ -1.18
CD44-206ENST00000415148 DPM3Q9P2X0 92 aa7.7□□□□□ -1.18
CD44-206ENST00000415148 A0A1W2PRD5 423 aa7.69□□□□□ -1.18
CD44-206ENST00000415148 A0A1W2PRF3 423 aa7.69□□□□□ -1.18
CD44-206ENST00000415148 A0A1W2PRM7 423 aa7.69□□□□□ -1.18
CD44-206ENST00000415148 NPIPB5A8MRT5 1133 aa7.69□□□□□ -1.18
CD44-206ENST00000415148 TIMM23O14925 209 aa7.69□□□□□ -1.18
CD44-206ENST00000415148 IL4P05112 153 aa7.69□□□□□ -1.18
CD44-206ENST00000415148 FCGR2BP31994 310 aaPredicted RBP7.69□□□□□ -1.18
CD44-206ENST00000415148 MFAP4P55083 255 aa7.69□□□□□ -1.18
CD44-206ENST00000415148 JMJD8Q96S16 334 aa7.69□□□□□ -1.18
CD44-206ENST00000415148 TPPP3Q9BW30 176 aa7.69□□□□□ -1.18
CD44-206ENST00000415148 SH3BGRL2Q9UJC5 107 aa7.69□□□□□ -1.18
CD44-206ENST00000415148 PIEZO2Q9H5I5 2752 aa7.69□□□□□ -1.18
CD44-206ENST00000415148 ZFHX3Q15911 3703 aa7.69□□□□□ -1.18
CD44-206ENST00000415148 LOC389332A0A1B0GUA5 103 aa7.69□□□□□ -1.18
CD44-206ENST00000415148 CD5LO43866 347 aa7.69□□□□□ -1.18
CD44-206ENST00000415148 COX8AP10176 69 aa7.69□□□□□ -1.18
CD44-206ENST00000415148 GPR183P32249 361 aa7.69□□□□□ -1.18
CD44-206ENST00000415148 CFHR4Q92496 578 aa7.69□□□□□ -1.18
CD44-206ENST00000415148 VKORC1Q9BQB6 163 aa7.69□□□□□ -1.18
CD44-206ENST00000415148 S4R3C0 116 aa7.69□□□□□ -1.18
CD44-206ENST00000415148 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.68□□□□□ -1.18
CD44-206ENST00000415148 TMEM189A5PLL7 270 aa7.68□□□□□ -1.18
CD44-206ENST00000415148 GNG7O60262 68 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms