RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 FAM25GB3EWG6 89 aa2.49□□□□□ -2.01
BRCA1-204ENST00000412061 SMIM24O75264 130 aa2.49□□□□□ -2.01
BRCA1-204ENST00000412061 PMP2P02689 132 aa2.49□□□□□ -2.01
BRCA1-204ENST00000412061 GPX1P07203 203 aa2.49□□□□□ -2.01
BRCA1-204ENST00000412061 MGST1P10620 155 aaKnown RBP2.49□□□□□ -2.01
BRCA1-204ENST00000412061 S100PP25815 95 aa2.49□□□□□ -2.01
BRCA1-204ENST00000412061 MAXP61244 160 aa2.49□□□□□ -2.01
BRCA1-204ENST00000412061 DIAPH2-AS1Q14236 149 aa2.49□□□□□ -2.01
BRCA1-204ENST00000412061 CDK5R1Q15078 307 aa2.49□□□□□ -2.01
BRCA1-204ENST00000412061 ZNF791Q3KP31 576 aaPredicted RBP2.49□□□□□ -2.01
BRCA1-204ENST00000412061 KRTAP13-2Q52LG2 175 aa2.49□□□□□ -2.01
BRCA1-204ENST00000412061 Q8IYB0 196 aa2.49□□□□□ -2.01
BRCA1-204ENST00000412061 FAM216BQ8N7L0 139 aa2.49□□□□□ -2.01
BRCA1-204ENST00000412061 OR4X2Q8NGF9 303 aa2.49□□□□□ -2.01
BRCA1-204ENST00000412061 TMEM203Q969S6 136 aa2.49□□□□□ -2.01
BRCA1-204ENST00000412061 PSORS1C2Q9UIG4 136 aa2.49□□□□□ -2.01
BRCA1-204ENST00000412061 NALCNQ8IZF0 1738 aa2.49□□□□□ -2.01
BRCA1-204ENST00000412061 KIAA2026Q5HYC2 2103 aa2.49□□□□□ -2.01
BRCA1-204ENST00000412061 ARHGEF11O15085 1522 aa2.49□□□□□ -2.01
BRCA1-204ENST00000412061 RIMS1Q86UR5 1692 aaKnown RBP2.48□□□□□ -2.01
BRCA1-204ENST00000412061 TRAV1-1A0A0B4J248 108 aa2.48□□□□□ -2.01
BRCA1-204ENST00000412061 MUC21A0A0G2JKD1 596 aa2.48□□□□□ -2.01
BRCA1-204ENST00000412061 MUC21A0A140T8X8 626 aa2.48□□□□□ -2.01
BRCA1-204ENST00000412061 OR2T8A6NH00 312 aa2.48□□□□□ -2.01
BRCA1-204ENST00000412061 SLC25A5P05141 298 aaKnown RBP2.48□□□□□ -2.01
BRCA1-204ENST00000412061 EMX2Q04743 252 aa2.48□□□□□ -2.01
BRCA1-204ENST00000412061 ZNF345Q14585 488 aa2.48□□□□□ -2.01
BRCA1-204ENST00000412061 LINC00301Q8NCQ3 95 aa2.48□□□□□ -2.01
BRCA1-204ENST00000412061 POP5Q969H6 163 aaKnown RBP2.48□□□□□ -2.01
BRCA1-204ENST00000412061 NDUFB11Q9NX14 153 aa2.48□□□□□ -2.01
BRCA1-204ENST00000412061 FOCADQ5VW36 1801 aa2.48□□□□□ -2.01
BRCA1-204ENST00000412061 EEA1Q15075 1411 aa2.48□□□□□ -2.01
BRCA1-204ENST00000412061 SMG6Q86US8 1419 aaKnown RBP2.48□□□□□ -2.01
BRCA1-204ENST00000412061 FAM92AA1XBS5 289 aa2.47□□□□□ -2.01
BRCA1-204ENST00000412061 ZNF727A8MUV8 499 aa2.47□□□□□ -2.01
BRCA1-204ENST00000412061 ATP6V1G2-DDX39BF2Z307 99 aa2.47□□□□□ -2.01
BRCA1-204ENST00000412061 FNDC10F2Z333 226 aa2.47□□□□□ -2.01
BRCA1-204ENST00000412061 UQCRQO14949 82 aa2.47□□□□□ -2.01
BRCA1-204ENST00000412061 NPFFO15130 113 aa2.47□□□□□ -2.01
BRCA1-204ENST00000412061 OR1I1O60431 355 aa2.47□□□□□ -2.01
BRCA1-204ENST00000412061 NCR2O95944 276 aa2.47□□□□□ -2.01
BRCA1-204ENST00000412061 HBDP02042 147 aa2.47□□□□□ -2.01
BRCA1-204ENST00000412061 FABP4P15090 132 aa2.47□□□□□ -2.01
BRCA1-204ENST00000412061 PEBP1P30086 187 aaKnown RBP2.47□□□□□ -2.01
BRCA1-204ENST00000412061 AKR1D1P51857 326 aa2.47□□□□□ -2.01
BRCA1-204ENST00000412061 QRFPP83859 136 aa2.47□□□□□ -2.01
BRCA1-204ENST00000412061 TMEM155Q4W5P6 130 aa2.47□□□□□ -2.01
BRCA1-204ENST00000412061 PRR9Q5T870 116 aa2.47□□□□□ -2.01
BRCA1-204ENST00000412061 ZNF826PQ6ZT77 177 aa2.47□□□□□ -2.01
BRCA1-204ENST00000412061 OR8B3Q8NGG8 313 aa2.47□□□□□ -2.01
BRCA1-204ENST00000412061 Q9BRP9 147 aa2.47□□□□□ -2.01
BRCA1-204ENST00000412061 TANC2Q9HCD6 1990 aa2.47□□□□□ -2.01
BRCA1-204ENST00000412061 SHANK1Q9Y566 2161 aa2.47□□□□□ -2.01
BRCA1-204ENST00000412061 IGLV10-54A0A075B6I4 117 aa2.46□□□□□ -2.02
BRCA1-204ENST00000412061 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.46□□□□□ -2.02
BRCA1-204ENST00000412061 FAM236AA0A1B0GUQ0 79 aa2.46□□□□□ -2.02
BRCA1-204ENST00000412061 FAM236BA0A1B0GV22 79 aa2.46□□□□□ -2.02
BRCA1-204ENST00000412061 ZNF670-ZNF695F2Z2N8 137 aa2.46□□□□□ -2.02
BRCA1-204ENST00000412061 IFNGP01579 166 aa2.46□□□□□ -2.02
BRCA1-204ENST00000412061 TPT1P13693 172 aaKnown RBP2.46□□□□□ -2.02
BRCA1-204ENST00000412061 ZNF25P17030 456 aaPredicted RBP2.46□□□□□ -2.02
BRCA1-204ENST00000412061 SNRPD3P62318 126 aaKnown RBP2.46□□□□□ -2.02
BRCA1-204ENST00000412061 RNASE10Q5GAN6 216 aaKnown RBP2.46□□□□□ -2.02
BRCA1-204ENST00000412061 SPANXN5Q5MJ07 72 aa2.46□□□□□ -2.02
BRCA1-204ENST00000412061 LCE3AQ5TA76 89 aa2.46□□□□□ -2.02
BRCA1-204ENST00000412061 LINC00471Q8N535 108 aa2.46□□□□□ -2.02
BRCA1-204ENST00000412061 DEDD2Q8WXF8 326 aa2.46□□□□□ -2.02
BRCA1-204ENST00000412061 C20orf166-AS1Q96NR2 134 aa2.46□□□□□ -2.02
BRCA1-204ENST00000412061 NAA38Q9BRA0 125 aaKnown RBP2.46□□□□□ -2.02
BRCA1-204ENST00000412061 SLC50A1Q9BRV3 221 aa2.46□□□□□ -2.02
BRCA1-204ENST00000412061 CCL26Q9Y258 94 aa2.46□□□□□ -2.02
BRCA1-204ENST00000412061 LY96Q9Y6Y9 160 aa2.46□□□□□ -2.02
BRCA1-204ENST00000412061 KIAA1107Q9UPP5 1409 aa2.46□□□□□ -2.02
BRCA1-204ENST00000412061 SLIT2O94813 1529 aa2.46□□□□□ -2.02
BRCA1-204ENST00000412061 EIF4G3O43432 1585 aaKnown RBP2.46□□□□□ -2.02
BRCA1-204ENST00000412061 A0A1W2PNN7 141 aa2.45□□□□□ -2.02
BRCA1-204ENST00000412061 LYRM1O43325 122 aa2.45□□□□□ -2.02
BRCA1-204ENST00000412061 IGLV6-57P01721 117 aa2.45□□□□□ -2.02
BRCA1-204ENST00000412061 MRPS36P82909 103 aaKnown RBP2.45□□□□□ -2.02
BRCA1-204ENST00000412061 ZNF518AQ6AHZ1 1483 aa2.45□□□□□ -2.02
BRCA1-204ENST00000412061 HAGHLQ6PII5 290 aaPredicted RBP2.45□□□□□ -2.02
BRCA1-204ENST00000412061 IGFL3Q6UXB1 125 aa2.45□□□□□ -2.02
BRCA1-204ENST00000412061 C12orf57Q99622 126 aa2.45□□□□□ -2.02
BRCA1-204ENST00000412061 CXCL16Q9H2A7 254 aa2.45□□□□□ -2.02
BRCA1-204ENST00000412061 C14orf132Q9NPU4 83 aa2.45□□□□□ -2.02
BRCA1-204ENST00000412061 FKBP11Q9NYL4 201 aa2.45□□□□□ -2.02
BRCA1-204ENST00000412061 COMMD3Q9UBI1 195 aa2.45□□□□□ -2.02
BRCA1-204ENST00000412061 GNG8Q9UK08 70 aa2.45□□□□□ -2.02
BRCA1-204ENST00000412061 STRCQ7RTU9 1775 aa2.45□□□□□ -2.02
BRCA1-204ENST00000412061 CEP162Q5TB80 1403 aa2.45□□□□□ -2.02
BRCA1-204ENST00000412061 TRAV27A0A087WT01 109 aa2.44□□□□□ -2.02
BRCA1-204ENST00000412061 IGKV2D-26A0A0A0MRZ7 120 aa2.44□□□□□ -2.02
BRCA1-204ENST00000412061 IBA57-AS1B1ANH7 110 aa2.44□□□□□ -2.02
BRCA1-204ENST00000412061 B4DSR2 109 aa2.44□□□□□ -2.02
BRCA1-204ENST00000412061 C17orf112F2Z3M2 114 aa2.44□□□□□ -2.02
BRCA1-204ENST00000412061 M0R233 179 aa2.44□□□□□ -2.02
BRCA1-204ENST00000412061 HLA-DRB4P13762 266 aa2.44□□□□□ -2.02
BRCA1-204ENST00000412061 ROMO1P60602 79 aa2.44□□□□□ -2.02
BRCA1-204ENST00000412061 RPL26P61254 145 aaKnown RBP2.44□□□□□ -2.02
BRCA1-204ENST00000412061 LSM3P62310 102 aaKnown RBP2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms