RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 IGLC2P0DOY2 106 aa11.88□□□□□ -0.51
NOD1-202ENST00000411552 HLA-DMBP28068 263 aa11.88□□□□□ -0.51
NOD1-202ENST00000411552 Q5BKY6 102 aa11.88□□□□□ -0.51
NOD1-202ENST00000411552 FAM78BQ5VT40 261 aa11.88□□□□□ -0.51
NOD1-202ENST00000411552 LCN15Q6UWW0 184 aa11.88□□□□□ -0.51
NOD1-202ENST00000411552 OR4B1Q8NGF8 309 aa11.88□□□□□ -0.51
NOD1-202ENST00000411552 LRRC20Q8TCA0 184 aa11.88□□□□□ -0.51
NOD1-202ENST00000411552 ASB13Q8WXK3 278 aa11.88□□□□□ -0.51
NOD1-202ENST00000411552 WFDC1Q9HC57 220 aa11.88□□□□□ -0.51
NOD1-202ENST00000411552 KCNIP2Q9NS61 270 aa11.88□□□□□ -0.51
NOD1-202ENST00000411552 XCL2Q9UBD3 114 aa11.88□□□□□ -0.51
NOD1-202ENST00000411552 H3BQ15 152 aa11.87□□□□□ -0.51
NOD1-202ENST00000411552 H3BTX0 84 aa11.87□□□□□ -0.51
NOD1-202ENST00000411552 IFNA5P01569 189 aa11.87□□□□□ -0.51
NOD1-202ENST00000411552 CXCL2P19875 107 aa11.87□□□□□ -0.51
NOD1-202ENST00000411552 FXYD7P58549 80 aa11.87□□□□□ -0.51
NOD1-202ENST00000411552 ZNF738Q8NE65 137 aa11.87□□□□□ -0.51
NOD1-202ENST00000411552 IL17DQ8TAD2 202 aa11.87□□□□□ -0.51
NOD1-202ENST00000411552 C1QTNF4Q9BXJ3 329 aa11.87□□□□□ -0.51
NOD1-202ENST00000411552 HRH4Q9H3N8 390 aa11.87□□□□□ -0.51
NOD1-202ENST00000411552 C17orf112F2Z3M2 114 aa11.86□□□□□ -0.51
NOD1-202ENST00000411552 SLC17A3O00476 420 aa11.86□□□□□ -0.51
NOD1-202ENST00000411552 PSG9Q00887 426 aa11.86□□□□□ -0.51
NOD1-202ENST00000411552 PSG3Q16557 428 aa11.86□□□□□ -0.51
NOD1-202ENST00000411552 SCGB1C1Q8TD33 95 aa11.86□□□□□ -0.51
NOD1-202ENST00000411552 SLC50A1Q9BRV3 221 aa11.86□□□□□ -0.51
NOD1-202ENST00000411552 SLC35B3Q9H1N7 401 aa11.86□□□□□ -0.51
NOD1-202ENST00000411552 ZNF331Q9NQX6 463 aaPredicted RBP11.86□□□□□ -0.51
NOD1-202ENST00000411552 A8MTW9 85 aa11.85□□□□□ -0.51
NOD1-202ENST00000411552 ZNF705EA8MWA4 302 aaPredicted RBP11.85□□□□□ -0.51
NOD1-202ENST00000411552 ZNF705DP0CH99 300 aaPredicted RBP11.85□□□□□ -0.51
NOD1-202ENST00000411552 ZNF705BP0CI00 300 aaPredicted RBP11.85□□□□□ -0.51
NOD1-202ENST00000411552 CNN1P51911 297 aaKnown RBP11.85□□□□□ -0.51
NOD1-202ENST00000411552 Q8NAQ8 132 aa11.85□□□□□ -0.51
NOD1-202ENST00000411552 AQP10Q96PS8 301 aa11.85□□□□□ -0.51
NOD1-202ENST00000411552 PARD6GQ9BYG4 376 aaPredicted RBP11.85□□□□□ -0.51
NOD1-202ENST00000411552 C11orf68Q9H3H3 251 aaKnown RBP11.85□□□□□ -0.51
NOD1-202ENST00000411552 ZNF586Q9NXT0 402 aa11.85□□□□□ -0.51
NOD1-202ENST00000411552 TMEM14CQ9P0S9 112 aa11.85□□□□□ -0.51
NOD1-202ENST00000411552 X6R8D5 127 aa11.85□□□□□ -0.51
NOD1-202ENST00000411552 DEFB4AO15263 64 aa11.84□□□□□ -0.51
NOD1-202ENST00000411552 PRB4P10163 310 aaPredicted RBP11.84□□□□□ -0.51
NOD1-202ENST00000411552 GUK1Q16774 197 aa11.84□□□□□ -0.51
NOD1-202ENST00000411552 LCE2DQ5TA82 110 aaPredicted RBP11.84□□□□□ -0.51
NOD1-202ENST00000411552 AMTNQ6UX39 209 aa11.84□□□□□ -0.51
NOD1-202ENST00000411552 MIR17HGQ75NE6 70 aa11.84□□□□□ -0.51
NOD1-202ENST00000411552 OR2T35Q8NGX2 323 aa11.84□□□□□ -0.51
NOD1-202ENST00000411552 SAT2Q96F10 170 aaPredicted RBP11.84□□□□□ -0.51
NOD1-202ENST00000411552 SLC25A2Q9BXI2 301 aa11.84□□□□□ -0.51
NOD1-202ENST00000411552 MFFQ9GZY8 342 aa11.84□□□□□ -0.51
NOD1-202ENST00000411552 DUSP14O95147 198 aaKnown RBP11.83□□□□□ -0.52
NOD1-202ENST00000411552 PYYP10082 97 aa11.83□□□□□ -0.52
NOD1-202ENST00000411552 FFAR4Q5NUL3 377 aa11.83□□□□□ -0.52
NOD1-202ENST00000411552 RPUSD4Q96CM3 377 aaKnown RBP11.83□□□□□ -0.52
NOD1-202ENST00000411552 FAM167A-AS1Q96KT0 104 aa11.83□□□□□ -0.52
NOD1-202ENST00000411552 RFNGQ9Y644 331 aa11.83□□□□□ -0.52
NOD1-202ENST00000411552 IGHV4-28A0A0C4DH34 117 aa11.82□□□□□ -0.52
NOD1-202ENST00000411552 ZNF705FA8MVS1 300 aaPredicted RBP11.82□□□□□ -0.52
NOD1-202ENST00000411552 MIFP14174 115 aa11.82□□□□□ -0.52
NOD1-202ENST00000411552 HIST1H1AQ02539 215 aaPredicted RBP11.82□□□□□ -0.52
NOD1-202ENST00000411552 OR8A1Q8NGG7 326 aa11.82□□□□□ -0.52
NOD1-202ENST00000411552 MRPL32Q9BYC8 188 aaKnown RBP11.82□□□□□ -0.52
NOD1-202ENST00000411552 FUT9Q9Y231 359 aa11.82□□□□□ -0.52
NOD1-202ENST00000411552 DYNC2H1Q8NCM8 4307 aaKnown RBP11.82□□□□□ -0.52
NOD1-202ENST00000411552 TRBV19A0A075B6N1 114 aa11.81□□□□□ -0.52
NOD1-202ENST00000411552 FXYD6-FXYD2A0A087WZ82 144 aa11.81□□□□□ -0.52
NOD1-202ENST00000411552 G3V3Q6 166 aa11.81□□□□□ -0.52
NOD1-202ENST00000411552 ZNF253O75346 499 aa11.81□□□□□ -0.52
NOD1-202ENST00000411552 RBMY1A1P0DJD3 496 aaKnown RBP11.81□□□□□ -0.52
NOD1-202ENST00000411552 RBMY1CP0DJD4 496 aa11.81□□□□□ -0.52
NOD1-202ENST00000411552 HIST1H1EP10412 219 aaKnown RBP11.81□□□□□ -0.52
NOD1-202ENST00000411552 RBMY1FQ15415 496 aaKnown RBP11.81□□□□□ -0.52
NOD1-202ENST00000411552 ZNF705AQ6ZN79 300 aaPredicted RBP11.81□□□□□ -0.52
NOD1-202ENST00000411552 INO80EQ8NBZ0 244 aaPredicted RBP11.81□□□□□ -0.52
NOD1-202ENST00000411552 RNF222A6NCQ9 220 aa11.8□□□□□ -0.52
NOD1-202ENST00000411552 CXorf65A6NEN9 183 aa11.8□□□□□ -0.52
NOD1-202ENST00000411552 PRAC2D3DTV9 90 aa11.8□□□□□ -0.52
NOD1-202ENST00000411552 NDUFB4O95168 129 aa11.8□□□□□ -0.52
NOD1-202ENST00000411552 PMS2P11Q13670 270 aa11.8□□□□□ -0.52
NOD1-202ENST00000411552 ZNF266Q14584 549 aa11.8□□□□□ -0.52
NOD1-202ENST00000411552 BLNKQ8WV28 456 aa11.8□□□□□ -0.52
NOD1-202ENST00000411552 TNFSF18Q9UNG2 199 aa11.8□□□□□ -0.52
NOD1-202ENST00000411552 IGHV3OR16-12A0A075B7B8 117 aa11.79□□□□□ -0.52
NOD1-202ENST00000411552 M0R2Z0 102 aa11.79□□□□□ -0.52
NOD1-202ENST00000411552 RHOBP62745 196 aa11.79□□□□□ -0.52
NOD1-202ENST00000411552 PDE6HQ13956 83 aa11.79□□□□□ -0.52
NOD1-202ENST00000411552 SPINK13Q1W4C9 94 aa11.79□□□□□ -0.52
NOD1-202ENST00000411552 OR51M1Q9H341 326 aa11.79□□□□□ -0.52
NOD1-202ENST00000411552 TIMM9Q9Y5J7 89 aa11.79□□□□□ -0.52
NOD1-202ENST00000411552 BOLA2-SMG1P6H3BVE0 249 aa11.78□□□□□ -0.52
NOD1-202ENST00000411552 OR10J4P0C629 311 aa11.78□□□□□ -0.52
NOD1-202ENST00000411552 NANOS2P60321 138 aaKnown RBP11.78□□□□□ -0.52
NOD1-202ENST00000411552 C1orf158Q8N1D5 194 aa11.78□□□□□ -0.52
NOD1-202ENST00000411552 HSD17B11Q8NBQ5 300 aa11.78□□□□□ -0.52
NOD1-202ENST00000411552 C11orf45Q8TAV5 145 aa11.78□□□□□ -0.52
NOD1-202ENST00000411552 FXYD5Q96DB9 178 aa11.78□□□□□ -0.52
NOD1-202ENST00000411552 ZNF503Q96F45 646 aa11.78□□□□□ -0.52
NOD1-202ENST00000411552 IGF2BP2-AS1Q96M15 143 aa11.78□□□□□ -0.52
NOD1-202ENST00000411552 PAXXQ9BUH6 204 aa11.78□□□□□ -0.52
NOD1-202ENST00000411552 GOLT1BQ9Y3E0 138 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms