RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 LINC00479Q96M42 142 aa10.87□□□□□ -0.67
LIMS2-206ENST00000409754 PYGO2Q9BRQ0 406 aa10.87□□□□□ -0.67
LIMS2-206ENST00000409754 TMEM89A2RUT3 159 aa10.87□□□□□ -0.67
LIMS2-206ENST00000409754 HOXA3O43365 443 aaPredicted RBP10.87□□□□□ -0.67
LIMS2-206ENST00000409754 ARL3P36405 182 aa10.87□□□□□ -0.67
LIMS2-206ENST00000409754 RPS10P46783 165 aaKnown RBP10.87□□□□□ -0.67
LIMS2-206ENST00000409754 UBE2G1P62253 170 aa10.87□□□□□ -0.67
LIMS2-206ENST00000409754 SRSF2Q01130 221 aaKnown RBP10.87□□□□□ -0.67
LIMS2-206ENST00000409754 KCNIP4Q6PIL6 250 aa10.87□□□□□ -0.67
LIMS2-206ENST00000409754 CMTM2Q8TAZ6 248 aa10.87□□□□□ -0.67
LIMS2-206ENST00000409754 C17orf77Q96MU5 243 aa10.87□□□□□ -0.67
LIMS2-206ENST00000409754 KLK15Q9H2R5 256 aa10.87□□□□□ -0.67
LIMS2-206ENST00000409754 TRAV34A0A0B4J273 112 aa10.86□□□□□ -0.67
LIMS2-206ENST00000409754 CLPSL1A2RUU4 121 aa10.86□□□□□ -0.67
LIMS2-206ENST00000409754 PPP5D1E7EU14 171 aa10.86□□□□□ -0.67
LIMS2-206ENST00000409754 ISLRO14498 428 aa10.86□□□□□ -0.67
LIMS2-206ENST00000409754 GGCTO75223 188 aaKnown RBP10.86□□□□□ -0.67
LIMS2-206ENST00000409754 IGHG4P01861 327 aa10.86□□□□□ -0.67
LIMS2-206ENST00000409754 BAGE2Q86Y30 109 aa10.86□□□□□ -0.67
LIMS2-206ENST00000409754 OR8I2Q8N0Y5 310 aa10.86□□□□□ -0.67
LIMS2-206ENST00000409754 EXOC3-AS1Q8N2X6 119 aa10.86□□□□□ -0.67
LIMS2-206ENST00000409754 SMIM12Q96EX1 92 aa10.86□□□□□ -0.67
LIMS2-206ENST00000409754 FMC1Q96HJ9 113 aa10.86□□□□□ -0.67
LIMS2-206ENST00000409754 PRSS22Q9GZN4 317 aa10.86□□□□□ -0.67
LIMS2-206ENST00000409754 NPFFR1Q9GZQ6 430 aa10.86□□□□□ -0.67
LIMS2-206ENST00000409754 BUB3O43684 328 aa10.85□□□□□ -0.67
LIMS2-206ENST00000409754 RPL15P61313 204 aaKnown RBP10.85□□□□□ -0.67
LIMS2-206ENST00000409754 PSG9Q00887 426 aa10.85□□□□□ -0.67
LIMS2-206ENST00000409754 FOXL1Q12952 345 aa10.85□□□□□ -0.67
LIMS2-206ENST00000409754 OR5I1Q13606 314 aa10.85□□□□□ -0.67
LIMS2-206ENST00000409754 TMEM95Q3KNT9 176 aa10.85□□□□□ -0.67
LIMS2-206ENST00000409754 C1orf194Q5T5A4 169 aa10.85□□□□□ -0.67
LIMS2-206ENST00000409754 GPR82Q96P67 336 aa10.85□□□□□ -0.67
LIMS2-206ENST00000409754 METTL26Q96S19 204 aa10.85□□□□□ -0.67
LIMS2-206ENST00000409754 ESM1Q9NQ30 184 aa10.85□□□□□ -0.67
LIMS2-206ENST00000409754 OSTCQ9NRP0 149 aa10.85□□□□□ -0.67
LIMS2-206ENST00000409754 RPH3ALQ9UNE2 315 aa10.85□□□□□ -0.67
LIMS2-206ENST00000409754 DNHD1Q96M86 4753 aa10.85□□□□□ -0.67
LIMS2-206ENST00000409754 IGHV3OR16-8A0A075B7F1 116 aa10.84□□□□□ -0.67
LIMS2-206ENST00000409754 SLC17A3O00476 420 aa10.84□□□□□ -0.67
LIMS2-206ENST00000409754 ZNF253O75346 499 aa10.84□□□□□ -0.67
LIMS2-206ENST00000409754 PSMB8P28062 276 aa10.84□□□□□ -0.67
LIMS2-206ENST00000409754 ERVFC1-1P60608 527 aa10.84□□□□□ -0.67
LIMS2-206ENST00000409754 TMEM86BQ8N661 226 aa10.84□□□□□ -0.67
LIMS2-206ENST00000409754 BTF3L4Q96K17 158 aa10.84□□□□□ -0.67
LIMS2-206ENST00000409754 ZNF702PQ9H963 129 aa10.84□□□□□ -0.67
LIMS2-206ENST00000409754 U3KQE9 123 aa10.84□□□□□ -0.67
LIMS2-206ENST00000409754 TRBV6-1A0A0K0K1D8 114 aa10.84□□□□□ -0.67
LIMS2-206ENST00000409754 NDUFA4O00483 81 aa10.84□□□□□ -0.67
LIMS2-206ENST00000409754 MGST1P10620 155 aaKnown RBP10.84□□□□□ -0.67
LIMS2-206ENST00000409754 FAM209BQ5JX69 171 aa10.84□□□□□ -0.67
LIMS2-206ENST00000409754 ZFP82Q8N141 532 aa10.84□□□□□ -0.67
LIMS2-206ENST00000409754 ARL6IP6Q8N6S5 226 aa10.84□□□□□ -0.67
LIMS2-206ENST00000409754 SIGLECL1Q8N7X8 197 aa10.84□□□□□ -0.67
LIMS2-206ENST00000409754 OR4X2Q8NGF9 303 aa10.84□□□□□ -0.67
LIMS2-206ENST00000409754 AAMDCQ9H7C9 122 aa10.84□□□□□ -0.67
LIMS2-206ENST00000409754 IL36BQ9NZH7 164 aa10.84□□□□□ -0.67
LIMS2-206ENST00000409754 SMAD5-AS1Q9Y6J3 95 aa10.84□□□□□ -0.67
LIMS2-206ENST00000409754 V9GYV3 84 aa10.84□□□□□ -0.67
LIMS2-206ENST00000409754 TENM1Q9UKZ4 2725 aa10.83□□□□□ -0.68
LIMS2-206ENST00000409754 A0A087X0K7 114 aa10.83□□□□□ -0.68
LIMS2-206ENST00000409754 A0A1W2PPQ1 181 aa10.83□□□□□ -0.68
LIMS2-206ENST00000409754 LTAP01374 205 aa10.83□□□□□ -0.68
LIMS2-206ENST00000409754 TRBV12-3P01733 135 aa10.83□□□□□ -0.68
LIMS2-206ENST00000409754 IGHV3-11P01762 117 aa10.83□□□□□ -0.68
LIMS2-206ENST00000409754 FAM231DQ6ZW35 169 aa10.83□□□□□ -0.68
LIMS2-206ENST00000409754 SRD5A3Q9H8P0 318 aa10.83□□□□□ -0.68
LIMS2-206ENST00000409754 TYMSP04818 313 aa10.82□□□□□ -0.68
LIMS2-206ENST00000409754 GOLT1AQ6ZVE7 132 aa10.82□□□□□ -0.68
LIMS2-206ENST00000409754 TMEM75Q8N9X5 138 aa10.82□□□□□ -0.68
LIMS2-206ENST00000409754 NHLRC2Q8NBF2 726 aa10.82□□□□□ -0.68
LIMS2-206ENST00000409754 MLST8Q9BVC4 326 aa10.82□□□□□ -0.68
LIMS2-206ENST00000409754 RNASE7Q9H1E1 156 aaKnown RBP10.82□□□□□ -0.68
LIMS2-206ENST00000409754 COL6A5A8TX70 2615 aa10.82□□□□□ -0.68
LIMS2-206ENST00000409754 TRAV9-1A0A075B6T8 112 aa10.81□□□□□ -0.68
LIMS2-206ENST00000409754 SERTM2A0A1B0GWG4 89 aa10.81□□□□□ -0.68
LIMS2-206ENST00000409754 DIRC3C9JPN6 131 aa10.81□□□□□ -0.68
LIMS2-206ENST00000409754 K7EQM0 130 aa10.81□□□□□ -0.68
LIMS2-206ENST00000409754 IGLV2-11P01706 119 aa10.81□□□□□ -0.68
LIMS2-206ENST00000409754 FAM3BP58499 235 aaPredicted RBP10.81□□□□□ -0.68
LIMS2-206ENST00000409754 SLC35B1P78383 322 aa10.81□□□□□ -0.68
LIMS2-206ENST00000409754 IBA57Q5T440 356 aaKnown RBP10.81□□□□□ -0.68
LIMS2-206ENST00000409754 LCNL1Q6ZST4 164 aa10.81□□□□□ -0.68
LIMS2-206ENST00000409754 Q86TA4 180 aa10.81□□□□□ -0.68
LIMS2-206ENST00000409754 Q8N2B8 174 aa10.81□□□□□ -0.68
LIMS2-206ENST00000409754 BIN3Q9NQY0 253 aa10.81□□□□□ -0.68
LIMS2-206ENST00000409754 CSN1S1P47710 185 aa10.8□□□□□ -0.68
LIMS2-206ENST00000409754 MEOX2P50222 304 aa10.8□□□□□ -0.68
LIMS2-206ENST00000409754 RPEL1Q2QD12 228 aa10.8□□□□□ -0.68
LIMS2-206ENST00000409754 SGK494Q96LW2 274 aa10.8□□□□□ -0.68
LIMS2-206ENST00000409754 ZNF785A8K8V0 405 aa10.8□□□□□ -0.68
LIMS2-206ENST00000409754 ZNF207O43670 478 aaKnown RBP10.8□□□□□ -0.68
LIMS2-206ENST00000409754 APOHP02749 345 aaPredicted RBP10.8□□□□□ -0.68
LIMS2-206ENST00000409754 TRGC2P03986 189 aa10.8□□□□□ -0.68
LIMS2-206ENST00000409754 ELANEP08246 267 aa10.8□□□□□ -0.68
LIMS2-206ENST00000409754 FOXE3Q13461 319 aa10.8□□□□□ -0.68
LIMS2-206ENST00000409754 TMEM183AQ8IXX5 376 aa10.8□□□□□ -0.68
LIMS2-206ENST00000409754 ZNF331Q9NQX6 463 aaPredicted RBP10.8□□□□□ -0.68
LIMS2-206ENST00000409754 PEF1Q9UBV8 284 aaKnown RBP10.8□□□□□ -0.68
LIMS2-206ENST00000409754 M0R3E3 92 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms