RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 AMTNQ6UX39 209 aa10.43□□□□□ -0.74
NIF3L1-205ENST00000409588 PATE2Q6UY27 113 aa10.43□□□□□ -0.74
NIF3L1-205ENST00000409588 LINC00305Q7Z4B0 112 aa10.43□□□□□ -0.74
NIF3L1-205ENST00000409588 CHAC2Q8WUX2 184 aa10.43□□□□□ -0.74
NIF3L1-205ENST00000409588 SLC50A1Q9BRV3 221 aa10.43□□□□□ -0.74
NIF3L1-205ENST00000409588 GPN1Q9HCN4 374 aaPredicted RBP10.43□□□□□ -0.74
NIF3L1-205ENST00000409588 DNAJC4Q9NNZ3 241 aa10.43□□□□□ -0.74
NIF3L1-205ENST00000409588 IGHV4-4A0A075B6R2 117 aa10.42□□□□□ -0.74
NIF3L1-205ENST00000409588 IGHV3OR16-12A0A075B7B8 117 aa10.42□□□□□ -0.74
NIF3L1-205ENST00000409588 TRAV8-2A0A0B4J237 113 aa10.42□□□□□ -0.74
NIF3L1-205ENST00000409588 CCNKO75909 580 aa10.42□□□□□ -0.74
NIF3L1-205ENST00000409588 CXCL3P19876 107 aa10.42□□□□□ -0.74
NIF3L1-205ENST00000409588 CAMLGP49069 296 aa10.42□□□□□ -0.74
NIF3L1-205ENST00000409588 SULT1A1P50225 295 aa10.42□□□□□ -0.74
NIF3L1-205ENST00000409588 CNN1P51911 297 aaKnown RBP10.42□□□□□ -0.74
NIF3L1-205ENST00000409588 FXYD7P58549 80 aa10.42□□□□□ -0.74
NIF3L1-205ENST00000409588 DEFB1P60022 68 aa10.42□□□□□ -0.74
NIF3L1-205ENST00000409588 SLC38A11Q08AI6 406 aa10.42□□□□□ -0.74
NIF3L1-205ENST00000409588 ARL16Q0P5N6 197 aa10.42□□□□□ -0.74
NIF3L1-205ENST00000409588 IL15RAQ13261 267 aa10.42□□□□□ -0.74
NIF3L1-205ENST00000409588 PSG3Q16557 428 aa10.42□□□□□ -0.74
NIF3L1-205ENST00000409588 GUK1Q16774 197 aa10.42□□□□□ -0.74
NIF3L1-205ENST00000409588 LCN15Q6UWW0 184 aa10.42□□□□□ -0.74
NIF3L1-205ENST00000409588 STX12Q86Y82 276 aa10.42□□□□□ -0.74
NIF3L1-205ENST00000409588 C1orf158Q8N1D5 194 aa10.42□□□□□ -0.74
NIF3L1-205ENST00000409588 OR1L4Q8NGR5 311 aa10.42□□□□□ -0.74
NIF3L1-205ENST00000409588 UHRF2Q96PU4 802 aa10.42□□□□□ -0.74
NIF3L1-205ENST00000409588 PFDN5Q99471 154 aa10.42□□□□□ -0.74
NIF3L1-205ENST00000409588 TMEM208Q9BTX3 173 aa10.42□□□□□ -0.74
NIF3L1-205ENST00000409588 NDUFAF3Q9BU61 184 aa10.42□□□□□ -0.74
NIF3L1-205ENST00000409588 LYRM2Q9NU23 88 aaPredicted RBP10.42□□□□□ -0.74
NIF3L1-205ENST00000409588 UQCC1Q9NVA1 299 aa10.42□□□□□ -0.74
NIF3L1-205ENST00000409588 DKK2Q9UBU2 259 aa10.42□□□□□ -0.74
NIF3L1-205ENST00000409588 LSM5Q9Y4Y9 91 aaKnown RBP10.42□□□□□ -0.74
NIF3L1-205ENST00000409588 CCSO14618 274 aa10.41□□□□□ -0.74
NIF3L1-205ENST00000409588 COX7A2P2O60397 106 aa10.41□□□□□ -0.74
NIF3L1-205ENST00000409588 MPDU1O75352 247 aa10.41□□□□□ -0.74
NIF3L1-205ENST00000409588 RLN2P04090 185 aa10.41□□□□□ -0.74
NIF3L1-205ENST00000409588 TSPOP30536 169 aa10.41□□□□□ -0.74
NIF3L1-205ENST00000409588 VWC2Q2TAL6 325 aa10.41□□□□□ -0.74
NIF3L1-205ENST00000409588 C10orf113Q5VZT2 155 aa10.41□□□□□ -0.74
NIF3L1-205ENST00000409588 TMEM256Q8N2U0 113 aa10.41□□□□□ -0.74
NIF3L1-205ENST00000409588 ZNF738Q8NE65 137 aa10.41□□□□□ -0.74
NIF3L1-205ENST00000409588 OR11H7Q8NGC8 314 aa10.41□□□□□ -0.74
NIF3L1-205ENST00000409588 KRTAP4-12Q9BQ66 201 aa10.41□□□□□ -0.74
NIF3L1-205ENST00000409588 SEC22CQ9BRL7 303 aa10.41□□□□□ -0.74
NIF3L1-205ENST00000409588 NIPSNAP3BQ9BS92 247 aa10.41□□□□□ -0.74
NIF3L1-205ENST00000409588 PPP1R14DQ9NXH3 145 aa10.41□□□□□ -0.74
NIF3L1-205ENST00000409588 CELA1Q9UNI1 258 aa10.41□□□□□ -0.74
NIF3L1-205ENST00000409588 EPPK1P58107 5090 aaKnown RBP10.4□□□□□ -0.74
NIF3L1-205ENST00000409588 MRPS12O15235 138 aaKnown RBP10.4□□□□□ -0.74
NIF3L1-205ENST00000409588 INSP01308 110 aa10.4□□□□□ -0.74
NIF3L1-205ENST00000409588 P0DMU3 169 aa10.4□□□□□ -0.74
NIF3L1-205ENST00000409588 FAM231AP0DMU4 169 aa10.4□□□□□ -0.74
NIF3L1-205ENST00000409588 FAM231CP0DMU5 169 aa10.4□□□□□ -0.74
NIF3L1-205ENST00000409588 RPL29P47914 159 aaKnown RBP10.4□□□□□ -0.74
NIF3L1-205ENST00000409588 CYCSP99999 105 aaKnown RBP10.4□□□□□ -0.74
NIF3L1-205ENST00000409588 OR8A1Q8NGG7 326 aa10.4□□□□□ -0.74
NIF3L1-205ENST00000409588 TMEM37Q8WXS4 190 aa10.4□□□□□ -0.74
NIF3L1-205ENST00000409588 MGST2Q99735 147 aa10.4□□□□□ -0.74
NIF3L1-205ENST00000409588 C11orf1Q9H5F2 150 aa10.4□□□□□ -0.74
NIF3L1-205ENST00000409588 WDR83OSQ9Y284 106 aa10.4□□□□□ -0.74
NIF3L1-205ENST00000409588 PXMP4Q9Y6I8 212 aa10.4□□□□□ -0.74
NIF3L1-205ENST00000409588 LOC102723971A0A1B0GUV8 181 aa10.39□□□□□ -0.75
NIF3L1-205ENST00000409588 FAM229AH3BQW9 127 aa10.39□□□□□ -0.75
NIF3L1-205ENST00000409588 PRAF2O60831 178 aa10.39□□□□□ -0.75
NIF3L1-205ENST00000409588 CST7O76096 145 aa10.39□□□□□ -0.75
NIF3L1-205ENST00000409588 EMP1P54849 157 aa10.39□□□□□ -0.75
NIF3L1-205ENST00000409588 LCE3BQ5TA77 95 aa10.39□□□□□ -0.75
NIF3L1-205ENST00000409588 NRARPQ7Z6K4 114 aa10.39□□□□□ -0.75
NIF3L1-205ENST00000409588 RPP25LQ8N5L8 163 aaKnown RBP10.39□□□□□ -0.75
NIF3L1-205ENST00000409588 RNF182Q8N6D2 247 aa10.39□□□□□ -0.75
NIF3L1-205ENST00000409588 TMEM252Q8N6L7 170 aa10.39□□□□□ -0.75
NIF3L1-205ENST00000409588 ENKURQ8TC29 256 aa10.39□□□□□ -0.75
NIF3L1-205ENST00000409588 C20orf144Q9BQM9 153 aa10.39□□□□□ -0.75
NIF3L1-205ENST00000409588 ZNF331Q9NQX6 463 aaPredicted RBP10.39□□□□□ -0.75
NIF3L1-205ENST00000409588 FAM24AA6NFZ4 105 aa10.38□□□□□ -0.75
NIF3L1-205ENST00000409588 A6NHS1 94 aa10.38□□□□□ -0.75
NIF3L1-205ENST00000409588 LYRM9A8MSI8 78 aa10.38□□□□□ -0.75
NIF3L1-205ENST00000409588 BOLA2-SMG1P6H3BVE0 249 aa10.38□□□□□ -0.75
NIF3L1-205ENST00000409588 UPK1BO75841 260 aa10.38□□□□□ -0.75
NIF3L1-205ENST00000409588 RHOBP62745 196 aa10.38□□□□□ -0.75
NIF3L1-205ENST00000409588 RAB32Q13637 225 aa10.38□□□□□ -0.75
NIF3L1-205ENST00000409588 FAM222AQ5U5X8 452 aa10.38□□□□□ -0.75
NIF3L1-205ENST00000409588 IGFL4Q6B9Z1 124 aa10.38□□□□□ -0.75
NIF3L1-205ENST00000409588 RPUSD4Q96CM3 377 aaKnown RBP10.38□□□□□ -0.75
NIF3L1-205ENST00000409588 NMES1Q9C002 83 aa10.38□□□□□ -0.75
NIF3L1-205ENST00000409588 SLC25A31Q9H0C2 315 aa10.38□□□□□ -0.75
NIF3L1-205ENST00000409588 CRXO43186 299 aaPredicted RBP10.37□□□□□ -0.75
NIF3L1-205ENST00000409588 ZNF253O75346 499 aa10.37□□□□□ -0.75
NIF3L1-205ENST00000409588 CDKN1BP46527 198 aa10.37□□□□□ -0.75
NIF3L1-205ENST00000409588 S100A10P60903 97 aa10.37□□□□□ -0.75
NIF3L1-205ENST00000409588 HIST1H1AQ02539 215 aaPredicted RBP10.37□□□□□ -0.75
NIF3L1-205ENST00000409588 SPINK13Q1W4C9 94 aa10.37□□□□□ -0.75
NIF3L1-205ENST00000409588 PTTG2Q9NZH5 202 aa10.37□□□□□ -0.75
NIF3L1-205ENST00000409588 YTHDF2Q9Y5A9 579 aaKnown RBP10.37□□□□□ -0.75
NIF3L1-205ENST00000409588 KMT2AQ03164 3969 aa10.36□□□□□ -0.75
NIF3L1-205ENST00000409588 A6NJY4 79 aa10.36□□□□□ -0.75
NIF3L1-205ENST00000409588 E5RGE8 158 aa10.36□□□□□ -0.75
NIF3L1-205ENST00000409588 IGLC2P0DOY2 106 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms