RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 SIGLEC8Q9NYZ4 499 aa14.33□□□□□ -0.12
SMPD4-202ENST00000409031 ZFP36L1Q07352 338 aaKnown RBP14.32□□□□□ -0.12
SMPD4-202ENST00000409031 SLC25A15Q9Y619 301 aa14.32□□□□□ -0.12
SMPD4-202ENST00000409031 FER1L5A0AVI2 2057 aa14.32□□□□□ -0.12
SMPD4-202ENST00000409031 TRGV3P03979 118 aa14.32□□□□□ -0.12
SMPD4-202ENST00000409031 IGKV1-16P04430 117 aa14.32□□□□□ -0.12
SMPD4-202ENST00000409031 FAM27E3Q08E93 113 aa14.32□□□□□ -0.12
SMPD4-202ENST00000409031 GAGE5Q13069 117 aa14.32□□□□□ -0.12
SMPD4-202ENST00000409031 GAGE6Q13070 117 aa14.32□□□□□ -0.12
SMPD4-202ENST00000409031 IGKV1D-17A0A075B6S4 117 aa14.32□□□□□ -0.12
SMPD4-202ENST00000409031 NLRC5Q86WI3 1866 aa14.32□□□□□ -0.12
SMPD4-202ENST00000409031 DPH3P1Q9H4G8 78 aa14.32□□□□□ -0.12
SMPD4-202ENST00000409031 RNF5Q99942 180 aa14.31□□□□□ -0.12
SMPD4-202ENST00000409031 SPANXDQ9BXN6 97 aa14.31□□□□□ -0.12
SMPD4-202ENST00000409031 GAGE12JA6NER3 117 aa14.31□□□□□ -0.12
SMPD4-202ENST00000409031 GAGE7O76087 117 aa14.31□□□□□ -0.12
SMPD4-202ENST00000409031 GAGE12FP0CL80 117 aa14.31□□□□□ -0.12
SMPD4-202ENST00000409031 GAGE12GP0CL81 117 aa14.31□□□□□ -0.12
SMPD4-202ENST00000409031 GAGE12IP0CL82 117 aa14.31□□□□□ -0.12
SMPD4-202ENST00000409031 APOBEC3AP31941 199 aaPredicted RBP14.31□□□□□ -0.12
SMPD4-202ENST00000409031 GAGE4Q13068 117 aa14.31□□□□□ -0.12
SMPD4-202ENST00000409031 NPFFR1Q9GZQ6 430 aa14.31□□□□□ -0.12
SMPD4-202ENST00000409031 ATP1A1-AS1Q5TC04 95 aa14.31□□□□□ -0.12
SMPD4-202ENST00000409031 IFITM1P13164 125 aa14.31□□□□□ -0.12
SMPD4-202ENST00000409031 Q8TAT8 98 aa14.31□□□□□ -0.12
SMPD4-202ENST00000409031 RAX2Q96IS3 184 aa14.31□□□□□ -0.12
SMPD4-202ENST00000409031 SHANK2-AS3Q9BTD1 123 aa14.31□□□□□ -0.12
SMPD4-202ENST00000409031 LCNL1Q6ZST4 164 aa14.3□□□□□ -0.12
SMPD4-202ENST00000409031 ZDBF2Q9HCK1 2354 aa14.3□□□□□ -0.12
SMPD4-202ENST00000409031 MRPL51Q4U2R6 128 aaKnown RBP14.3□□□□□ -0.12
SMPD4-202ENST00000409031 Q8N8P6 123 aa14.3□□□□□ -0.12
SMPD4-202ENST00000409031 YPEL4Q96NS1 127 aa14.3□□□□□ -0.12
SMPD4-202ENST00000409031 IGHV1-46P01743 117 aa14.3□□□□□ -0.12
SMPD4-202ENST00000409031 FAM168AQ92567 244 aa14.3□□□□□ -0.12
SMPD4-202ENST00000409031 MYMXA0A1B0GTQ4 84 aa14.3□□□□□ -0.12
SMPD4-202ENST00000409031 AMTNQ6UX39 209 aa14.3□□□□□ -0.12
SMPD4-202ENST00000409031 CD7P09564 240 aa14.29□□□□□ -0.12
SMPD4-202ENST00000409031 PRB4P10163 310 aaPredicted RBP14.29□□□□□ -0.12
SMPD4-202ENST00000409031 IGKV3-20P01619 116 aa14.29□□□□□ -0.12
SMPD4-202ENST00000409031 C9orf153Q5TBE3 101 aa14.29□□□□□ -0.12
SMPD4-202ENST00000409031 SCRT2Q9NQ03 307 aa14.29□□□□□ -0.12
SMPD4-202ENST00000409031 VCYO14598 125 aa14.29□□□□□ -0.12
SMPD4-202ENST00000409031 C12orf74Q32Q52 190 aa14.29□□□□□ -0.12
SMPD4-202ENST00000409031 FDCSPQ8NFU4 85 aa14.29□□□□□ -0.12
SMPD4-202ENST00000409031 NDUFA4L2Q9NRX3 87 aa14.29□□□□□ -0.12
SMPD4-202ENST00000409031 OVOL1O14753 267 aa14.29□□□□□ -0.12
SMPD4-202ENST00000409031 ZNF688P0C7X2 276 aa14.29□□□□□ -0.12
SMPD4-202ENST00000409031 LINC01545Q5VT33 79 aa14.29□□□□□ -0.12
SMPD4-202ENST00000409031 C1orf122Q6ZSJ8 110 aa14.29□□□□□ -0.12
SMPD4-202ENST00000409031 NUP37Q8NFH4 326 aa14.29□□□□□ -0.12
SMPD4-202ENST00000409031 TANC1Q9C0D5 1861 aa14.28□□□□□ -0.12
SMPD4-202ENST00000409031 C1QTNF4Q9BXJ3 329 aa14.28□□□□□ -0.12
SMPD4-202ENST00000409031 K7ERJ3 54 aa14.28□□□□□ -0.12
SMPD4-202ENST00000409031 CD28P10747 220 aa14.28□□□□□ -0.12
SMPD4-202ENST00000409031 RBMY1BA6NDE4 496 aaKnown RBP14.28□□□□□ -0.12
SMPD4-202ENST00000409031 RBMY1EA6NEQ0 496 aaKnown RBP14.28□□□□□ -0.12
SMPD4-202ENST00000409031 RBMY1DP0C7P1 496 aaKnown RBP14.28□□□□□ -0.12
SMPD4-202ENST00000409031 RBMY1A1P0DJD3 496 aaKnown RBP14.28□□□□□ -0.12
SMPD4-202ENST00000409031 RBMY1CP0DJD4 496 aa14.28□□□□□ -0.12
SMPD4-202ENST00000409031 CITED1Q99966 193 aa14.28□□□□□ -0.12
SMPD4-202ENST00000409031 DOCK7Q96N67 2140 aa14.28□□□□□ -0.12
SMPD4-202ENST00000409031 HEATR1Q9H583 2144 aaKnown RBP14.27□□□□□ -0.12
SMPD4-202ENST00000409031 TIMM23O14925 209 aa14.27□□□□□ -0.13
SMPD4-202ENST00000409031 Q6ZSR3 168 aa14.27□□□□□ -0.13
SMPD4-202ENST00000409031 SIGLEC9Q9Y336 463 aa14.27□□□□□ -0.13
SMPD4-202ENST00000409031 G3V4G9 280 aa14.27□□□□□ -0.13
SMPD4-202ENST00000409031 NDUFS7O75251 213 aa14.27□□□□□ -0.13
SMPD4-202ENST00000409031 C11orf1Q9H5F2 150 aa14.27□□□□□ -0.13
SMPD4-202ENST00000409031 IGHV3-64A0A075B6Q5 118 aa14.26□□□□□ -0.13
SMPD4-202ENST00000409031 H3BMM0 161 aa14.26□□□□□ -0.13
SMPD4-202ENST00000409031 TMEM200BQ69YZ2 307 aa14.26□□□□□ -0.13
SMPD4-202ENST00000409031 UBE2WQ96B02 151 aa14.26□□□□□ -0.13
SMPD4-202ENST00000409031 A0A1W2PPI3 338 aa14.26□□□□□ -0.13
SMPD4-202ENST00000409031 PLXNA2O75051 1894 aa14.26□□□□□ -0.13
SMPD4-202ENST00000409031 MORN3Q6PF18 240 aaPredicted RBP14.26□□□□□ -0.13
SMPD4-202ENST00000409031 OR11H6Q8NGC7 330 aa14.26□□□□□ -0.13
SMPD4-202ENST00000409031 FXYD5Q96DB9 178 aa14.26□□□□□ -0.13
SMPD4-202ENST00000409031 SPRR3Q9UBC9 169 aa14.26□□□□□ -0.13
SMPD4-202ENST00000409031 EDA2RQ9HAV5 297 aa14.26□□□□□ -0.13
SMPD4-202ENST00000409031 MRPL35Q9NZE8 188 aaKnown RBP14.26□□□□□ -0.13
SMPD4-202ENST00000409031 MYO7BQ6PIF6 2116 aa14.25□□□□□ -0.13
SMPD4-202ENST00000409031 WDR90Q96KV7 1748 aa14.25□□□□□ -0.13
SMPD4-202ENST00000409031 TRBV19A0A075B6N1 114 aa14.25□□□□□ -0.13
SMPD4-202ENST00000409031 RRN3P1Q2M238 152 aa14.25□□□□□ -0.13
SMPD4-202ENST00000409031 IGHV1-8P0DP01 117 aa14.25□□□□□ -0.13
SMPD4-202ENST00000409031 B5MCH6 92 aa14.25□□□□□ -0.13
SMPD4-202ENST00000409031 F8VRH5 84 aa14.25□□□□□ -0.13
SMPD4-202ENST00000409031 BSPH1Q075Z2 132 aa14.25□□□□□ -0.13
SMPD4-202ENST00000409031 SLC25A16P16260 332 aa14.24□□□□□ -0.13
SMPD4-202ENST00000409031 SRSF8Q9BRL6 282 aaKnown RBP14.24□□□□□ -0.13
SMPD4-202ENST00000409031 POLEQ07864 2286 aa14.24□□□□□ -0.13
SMPD4-202ENST00000409031 PCP2Q8IVA1 136 aa14.24□□□□□ -0.13
SMPD4-202ENST00000409031 IGHV1-3A0A0C4DH29 117 aa14.24□□□□□ -0.13
SMPD4-202ENST00000409031 RBX1P62877 108 aa14.24□□□□□ -0.13
SMPD4-202ENST00000409031 NEGR1Q7Z3B1 354 aa14.24□□□□□ -0.13
SMPD4-202ENST00000409031 TMEM14CQ9P0S9 112 aa14.24□□□□□ -0.13
SMPD4-202ENST00000409031 DKK2Q9UBU2 259 aa14.24□□□□□ -0.13
SMPD4-202ENST00000409031 NPYP01303 97 aa14.24□□□□□ -0.13
SMPD4-202ENST00000409031 HELZP42694 1942 aaKnown RBP14.23□□□□□ -0.13
SMPD4-202ENST00000409031 LGALS1P09382 135 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 676.8 ms