RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 EMP1P54849 157 aa6.53□□□□□ -1.36
SNORD88A-201ENST00000408314 GUK1Q16774 197 aa6.53□□□□□ -1.36
SNORD88A-201ENST00000408314 ATP6V1FQ16864 119 aa6.53□□□□□ -1.36
SNORD88A-201ENST00000408314 C12orf74Q32Q52 190 aa6.53□□□□□ -1.36
SNORD88A-201ENST00000408314 C10orf113Q5VZT2 155 aa6.53□□□□□ -1.36
SNORD88A-201ENST00000408314 LINC00305Q7Z4B0 112 aa6.53□□□□□ -1.36
SNORD88A-201ENST00000408314 UHRF2Q96PU4 802 aa6.53□□□□□ -1.36
SNORD88A-201ENST00000408314 NIPSNAP3BQ9BS92 247 aa6.53□□□□□ -1.36
SNORD88A-201ENST00000408314 KCNIP2Q9NS61 270 aa6.53□□□□□ -1.36
SNORD88A-201ENST00000408314 LYRM2Q9NU23 88 aaPredicted RBP6.53□□□□□ -1.36
SNORD88A-201ENST00000408314 APLNQ9ULZ1 77 aa6.53□□□□□ -1.36
SNORD88A-201ENST00000408314 CELA1Q9UNI1 258 aa6.53□□□□□ -1.36
SNORD88A-201ENST00000408314 PXMP4Q9Y6I8 212 aa6.53□□□□□ -1.36
SNORD88A-201ENST00000408314 TRAV8-2A0A0B4J237 113 aa6.52□□□□□ -1.37
SNORD88A-201ENST00000408314 CXCL3P19876 107 aa6.52□□□□□ -1.37
SNORD88A-201ENST00000408314 TSPOP30536 169 aa6.52□□□□□ -1.37
SNORD88A-201ENST00000408314 DEFB1P60022 68 aa6.52□□□□□ -1.37
SNORD88A-201ENST00000408314 RHOBP62745 196 aa6.52□□□□□ -1.37
SNORD88A-201ENST00000408314 HIST1H1AQ02539 215 aaPredicted RBP6.52□□□□□ -1.37
SNORD88A-201ENST00000408314 BAXQ07812 192 aa6.52□□□□□ -1.37
SNORD88A-201ENST00000408314 PSG3Q16557 428 aa6.52□□□□□ -1.37
SNORD88A-201ENST00000408314 OR11H7Q8NGC8 314 aa6.52□□□□□ -1.37
SNORD88A-201ENST00000408314 OR8A1Q8NGG7 326 aa6.52□□□□□ -1.37
SNORD88A-201ENST00000408314 OR10J6PQ8NGY7 276 aa6.52□□□□□ -1.37
SNORD88A-201ENST00000408314 C20orf173Q96LM9 149 aa6.52□□□□□ -1.37
SNORD88A-201ENST00000408314 C20orf144Q9BQM9 153 aa6.52□□□□□ -1.37
SNORD88A-201ENST00000408314 SEC22CQ9BRL7 303 aa6.52□□□□□ -1.37
SNORD88A-201ENST00000408314 PTTG2Q9NZH5 202 aa6.52□□□□□ -1.37
SNORD88A-201ENST00000408314 DKK2Q9UBU2 259 aa6.52□□□□□ -1.37
SNORD88A-201ENST00000408314 WDR83OSQ9Y284 106 aa6.52□□□□□ -1.37
SNORD88A-201ENST00000408314 UBE2L5PA0A1B0GUS4 154 aa6.51□□□□□ -1.37
SNORD88A-201ENST00000408314 LYRM9A8MSI8 78 aa6.51□□□□□ -1.37
SNORD88A-201ENST00000408314 UPK1BO75841 260 aa6.51□□□□□ -1.37
SNORD88A-201ENST00000408314 CST7O76096 145 aa6.51□□□□□ -1.37
SNORD88A-201ENST00000408314 RPL29P47914 159 aaKnown RBP6.51□□□□□ -1.37
SNORD88A-201ENST00000408314 DEFA1P59665 94 aa6.51□□□□□ -1.37
SNORD88A-201ENST00000408314 DEFA3P59666 94 aa6.51□□□□□ -1.37
SNORD88A-201ENST00000408314 DAD1P61803 113 aa6.51□□□□□ -1.37
SNORD88A-201ENST00000408314 CYCSP99999 105 aaKnown RBP6.51□□□□□ -1.37
SNORD88A-201ENST00000408314 SPINK13Q1W4C9 94 aa6.51□□□□□ -1.37
SNORD88A-201ENST00000408314 VWC2Q2TAL6 325 aa6.51□□□□□ -1.37
SNORD88A-201ENST00000408314 FAM222AQ5U5X8 452 aa6.51□□□□□ -1.37
SNORD88A-201ENST00000408314 AMTNQ6UX39 209 aa6.51□□□□□ -1.37
SNORD88A-201ENST00000408314 NRARPQ7Z6K4 114 aa6.51□□□□□ -1.37
SNORD88A-201ENST00000408314 C1orf158Q8N1D5 194 aa6.51□□□□□ -1.37
SNORD88A-201ENST00000408314 RNF182Q8N6D2 247 aa6.51□□□□□ -1.37
SNORD88A-201ENST00000408314 CHAC2Q8WUX2 184 aa6.51□□□□□ -1.37
SNORD88A-201ENST00000408314 RPUSD4Q96CM3 377 aaKnown RBP6.51□□□□□ -1.37
SNORD88A-201ENST00000408314 MGST2Q99735 147 aa6.51□□□□□ -1.37
SNORD88A-201ENST00000408314 SLC25A31Q9H0C2 315 aa6.51□□□□□ -1.37
SNORD88A-201ENST00000408314 DNAJC4Q9NNZ3 241 aa6.51□□□□□ -1.37
SNORD88A-201ENST00000408314 ZNF331Q9NQX6 463 aaPredicted RBP6.51□□□□□ -1.37
SNORD88A-201ENST00000408314 YTHDF2Q9Y5A9 579 aaKnown RBP6.51□□□□□ -1.37
SNORD88A-201ENST00000408314 FAM24AA6NFZ4 105 aa6.5□□□□□ -1.37
SNORD88A-201ENST00000408314 E5RGE8 158 aa6.5□□□□□ -1.37
SNORD88A-201ENST00000408314 M0R2Z0 102 aa6.5□□□□□ -1.37
SNORD88A-201ENST00000408314 ZNF253O75346 499 aa6.5□□□□□ -1.37
SNORD88A-201ENST00000408314 PET100P0DJ07 73 aa6.5□□□□□ -1.37
SNORD88A-201ENST00000408314 CDKN1BP46527 198 aa6.5□□□□□ -1.37
SNORD88A-201ENST00000408314 PRR20EP86478 221 aa6.5□□□□□ -1.37
SNORD88A-201ENST00000408314 PRR20CP86479 221 aa6.5□□□□□ -1.37
SNORD88A-201ENST00000408314 PRR20DP86480 221 aa6.5□□□□□ -1.37
SNORD88A-201ENST00000408314 PRR20BP86481 221 aa6.5□□□□□ -1.37
SNORD88A-201ENST00000408314 PRR20AP86496 221 aa6.5□□□□□ -1.37
SNORD88A-201ENST00000408314 ARL16Q0P5N6 197 aa6.5□□□□□ -1.37
SNORD88A-201ENST00000408314 RAB32Q13637 225 aa6.5□□□□□ -1.37
SNORD88A-201ENST00000408314 IGFL4Q6B9Z1 124 aa6.5□□□□□ -1.37
SNORD88A-201ENST00000408314 PATE2Q6UY27 113 aa6.5□□□□□ -1.37
SNORD88A-201ENST00000408314 ZNF493Q6ZR52 646 aa6.5□□□□□ -1.37
SNORD88A-201ENST00000408314 ZNF767PQ75MW2 155 aa6.5□□□□□ -1.37
SNORD88A-201ENST00000408314 UBE2DNLQ8IWF7 75 aa6.5□□□□□ -1.37
SNORD88A-201ENST00000408314 RPP25LQ8N5L8 163 aaKnown RBP6.5□□□□□ -1.37
SNORD88A-201ENST00000408314 TMEM252Q8N6L7 170 aa6.5□□□□□ -1.37
SNORD88A-201ENST00000408314 C16orf74Q96GX8 76 aa6.5□□□□□ -1.37
SNORD88A-201ENST00000408314 C17orf77Q96MU5 243 aa6.5□□□□□ -1.37
SNORD88A-201ENST00000408314 SLC39A9Q9NUM3 307 aa6.5□□□□□ -1.37
SNORD88A-201ENST00000408314 H7BYZ3 331 aa6.49□□□□□ -1.37
SNORD88A-201ENST00000408314 MRPS12O15235 138 aaKnown RBP6.49□□□□□ -1.37
SNORD88A-201ENST00000408314 FGF7P21781 194 aa6.49□□□□□ -1.37
SNORD88A-201ENST00000408314 TAS2R60P59551 318 aa6.49□□□□□ -1.37
SNORD88A-201ENST00000408314 OPCMLQ14982 345 aa6.49□□□□□ -1.37
SNORD88A-201ENST00000408314 POM121L12Q8N7R1 296 aa6.49□□□□□ -1.37
SNORD88A-201ENST00000408314 C15orf53Q8NAA6 179 aa6.49□□□□□ -1.37
SNORD88A-201ENST00000408314 TMEM37Q8WXS4 190 aa6.49□□□□□ -1.37
SNORD88A-201ENST00000408314 MRPL53Q96EL3 112 aaKnown RBP6.49□□□□□ -1.37
SNORD88A-201ENST00000408314 LINC01587Q99440 93 aa6.49□□□□□ -1.37
SNORD88A-201ENST00000408314 NMES1Q9C002 83 aa6.49□□□□□ -1.37
SNORD88A-201ENST00000408314 C11orf1Q9H5F2 150 aa6.49□□□□□ -1.37
SNORD88A-201ENST00000408314 PRELID1Q9Y255 219 aa6.49□□□□□ -1.37
SNORD88A-201ENST00000408314 VPS13DQ5THJ4 4388 aa6.48□□□□□ -1.37
SNORD88A-201ENST00000408314 IGSF23A1L1A6 192 aa6.48□□□□□ -1.37
SNORD88A-201ENST00000408314 C17orf112F2Z3M2 114 aa6.48□□□□□ -1.37
SNORD88A-201ENST00000408314 INMT-MINDY4F8WBC2 141 aa6.48□□□□□ -1.37
SNORD88A-201ENST00000408314 CRXO43186 299 aaPredicted RBP6.48□□□□□ -1.37
SNORD88A-201ENST00000408314 IGLC2P0DOY2 106 aa6.48□□□□□ -1.37
SNORD88A-201ENST00000408314 HTN3P15516 51 aa6.48□□□□□ -1.37
SNORD88A-201ENST00000408314 LEPP41159 167 aa6.48□□□□□ -1.37
SNORD88A-201ENST00000408314 IL15RAQ13261 267 aa6.48□□□□□ -1.37
SNORD88A-201ENST00000408314 PDE6HQ13956 83 aa6.48□□□□□ -1.37
SNORD88A-201ENST00000408314 MIC13Q5XKP0 118 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms