RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 BEND2Q8NDZ0 799 aa9.47□□□□□ -0.89
PCNX4-204ENST00000406949 ARPC1AQ92747 370 aa9.47□□□□□ -0.89
PCNX4-204ENST00000406949 CCDC144NLQ6NUI1 221 aa9.47□□□□□ -0.89
PCNX4-204ENST00000406949 TP53TG3Q9ULZ0 132 aa9.47□□□□□ -0.89
PCNX4-204ENST00000406949 SH2D7A6NKC9 451 aaPredicted RBP9.46□□□□□ -0.89
PCNX4-204ENST00000406949 CDSNQ15517 529 aa9.46□□□□□ -0.89
PCNX4-204ENST00000406949 IGFL4Q6B9Z1 124 aa9.46□□□□□ -0.89
PCNX4-204ENST00000406949 NHLH1Q02575 133 aa9.46□□□□□ -0.9
PCNX4-204ENST00000406949 Q0VG73 95 aa9.46□□□□□ -0.9
PCNX4-204ENST00000406949 SCGB2A2Q13296 93 aa9.46□□□□□ -0.9
PCNX4-204ENST00000406949 OR10J3Q5JRS4 329 aa9.46□□□□□ -0.9
PCNX4-204ENST00000406949 C8orf31Q8N9H6 132 aa9.46□□□□□ -0.9
PCNX4-204ENST00000406949 OTORQ9NRC9 128 aa9.46□□□□□ -0.9
PCNX4-204ENST00000406949 UNQ5815/PRO19632Q6UWF5 114 aa9.45□□□□□ -0.9
PCNX4-204ENST00000406949 VMO1Q7Z5L0 202 aa9.45□□□□□ -0.9
PCNX4-204ENST00000406949 C18orf32Q8TCD1 76 aa9.45□□□□□ -0.9
PCNX4-204ENST00000406949 C21orf62Q9NYP8 219 aa9.45□□□□□ -0.9
PCNX4-204ENST00000406949 LOC389332A0A1B0GUA5 103 aa9.45□□□□□ -0.9
PCNX4-204ENST00000406949 TEX22C9J3V5 150 aa9.45□□□□□ -0.9
PCNX4-204ENST00000406949 CLEC3BP05452 202 aa9.45□□□□□ -0.9
PCNX4-204ENST00000406949 C3orf79P0CE67 100 aa9.45□□□□□ -0.9
PCNX4-204ENST00000406949 ZNF138P52744 262 aa9.45□□□□□ -0.9
PCNX4-204ENST00000406949 OR4B1Q8NGF8 309 aa9.45□□□□□ -0.9
PCNX4-204ENST00000406949 MSRB2Q9Y3D2 182 aa9.45□□□□□ -0.9
PCNX4-204ENST00000406949 NACAE9PAV3 2078 aa9.45□□□□□ -0.9
PCNX4-204ENST00000406949 PSMB11A5LHX3 300 aa9.45□□□□□ -0.9
PCNX4-204ENST00000406949 RBX1P62877 108 aa9.45□□□□□ -0.9
PCNX4-204ENST00000406949 C5orf64Q2M2E5 130 aa9.45□□□□□ -0.9
PCNX4-204ENST00000406949 LDLRAD2Q5SZI1 272 aa9.45□□□□□ -0.9
PCNX4-204ENST00000406949 ZNF841Q6ZN19 808 aa9.45□□□□□ -0.9
PCNX4-204ENST00000406949 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.44□□□□□ -0.9
PCNX4-204ENST00000406949 ZNF207O43670 478 aaKnown RBP9.44□□□□□ -0.9
PCNX4-204ENST00000406949 RBPMS2Q6ZRY4 209 aaKnown RBP9.44□□□□□ -0.9
PCNX4-204ENST00000406949 PRSS3P2Q8NHM4 247 aa9.44□□□□□ -0.9
PCNX4-204ENST00000406949 MTORP42345 2549 aa9.44□□□□□ -0.9
PCNX4-204ENST00000406949 GPR183P32249 361 aa9.44□□□□□ -0.9
PCNX4-204ENST00000406949 KLHDC1Q8N7A1 406 aa9.44□□□□□ -0.9
PCNX4-204ENST00000406949 IGKV1-17P01599 117 aa9.44□□□□□ -0.9
PCNX4-204ENST00000406949 GP9P14770 177 aa9.44□□□□□ -0.9
PCNX4-204ENST00000406949 FA2HQ7L5A8 372 aa9.44□□□□□ -0.9
PCNX4-204ENST00000406949 TOMM40O96008 361 aa9.43□□□□□ -0.9
PCNX4-204ENST00000406949 Q86TA4 180 aa9.43□□□□□ -0.9
PCNX4-204ENST00000406949 INS-IGF2F8WCM5 200 aa9.43□□□□□ -0.9
PCNX4-204ENST00000406949 TNFRSF13BO14836 293 aaPredicted RBP9.43□□□□□ -0.9
PCNX4-204ENST00000406949 ORM1P02763 201 aa9.43□□□□□ -0.9
PCNX4-204ENST00000406949 ADORA2A-AS1P86434 159 aa9.43□□□□□ -0.9
PCNX4-204ENST00000406949 COL5A1-AS1Q5SY13 56 aa9.43□□□□□ -0.9
PCNX4-204ENST00000406949 LINC00322Q6ZN03 302 aaPredicted RBP9.43□□□□□ -0.9
PCNX4-204ENST00000406949 NIT1Q86X76 327 aa9.43□□□□□ -0.9
PCNX4-204ENST00000406949 NEU4Q8WWR8 484 aaPredicted RBP9.43□□□□□ -0.9
PCNX4-204ENST00000406949 MIEN1Q9BRT3 115 aa9.43□□□□□ -0.9
PCNX4-204ENST00000406949 PSG8Q9UQ74 426 aa9.43□□□□□ -0.9
PCNX4-204ENST00000406949 CDKN1BP46527 198 aa9.43□□□□□ -0.9
PCNX4-204ENST00000406949 RPL11P62913 178 aaKnown RBP9.43□□□□□ -0.9
PCNX4-204ENST00000406949 RIGQ13278 110 aa9.43□□□□□ -0.9
PCNX4-204ENST00000406949 PMCHL2Q9BQD1 86 aa9.43□□□□□ -0.9
PCNX4-204ENST00000406949 MCRIP2Q9BUT9 160 aaKnown RBP9.43□□□□□ -0.9
PCNX4-204ENST00000406949 C1RLQ9NZP8 487 aa9.43□□□□□ -0.9
PCNX4-204ENST00000406949 LINC00527Q9UJ94 153 aa9.43□□□□□ -0.9
PCNX4-204ENST00000406949 IGKV2-40A0A087WW87 121 aaPredicted RBP9.42□□□□□ -0.9
PCNX4-204ENST00000406949 J3KRW8 73 aa9.42□□□□□ -0.9
PCNX4-204ENST00000406949 LEPROTL1O95214 131 aa9.42□□□□□ -0.9
PCNX4-204ENST00000406949 IGKV2D-40P01614 121 aaPredicted RBP9.42□□□□□ -0.9
PCNX4-204ENST00000406949 FAM106CPP0CH98 169 aa9.42□□□□□ -0.9
PCNX4-204ENST00000406949 LINC00310P59036 64 aa9.42□□□□□ -0.9
PCNX4-204ENST00000406949 CITED1Q99966 193 aa9.42□□□□□ -0.9
PCNX4-204ENST00000406949 I3L2K1 104 aa9.42□□□□□ -0.9
PCNX4-204ENST00000406949 PRTN3P24158 256 aa9.42□□□□□ -0.9
PCNX4-204ENST00000406949 TMEM95Q3KNT9 176 aa9.42□□□□□ -0.9
PCNX4-204ENST00000406949 PVRIGQ6DKI7 326 aa9.42□□□□□ -0.9
PCNX4-204ENST00000406949 Q8TAT8 98 aa9.42□□□□□ -0.9
PCNX4-204ENST00000406949 EPG5Q9HCE0 2579 aa9.42□□□□□ -0.9
PCNX4-204ENST00000406949 IGKV3-7A0A075B6H7 116 aa9.42□□□□□ -0.9
PCNX4-204ENST00000406949 A0A1B0GUT8 65 aa9.42□□□□□ -0.9
PCNX4-204ENST00000406949 K7EIM0 57 aa9.42□□□□□ -0.9
PCNX4-204ENST00000406949 CRYGCP07315 174 aa9.42□□□□□ -0.9
PCNX4-204ENST00000406949 HINT1P49773 126 aaPredicted RBP9.42□□□□□ -0.9
PCNX4-204ENST00000406949 FAM231DQ6ZW35 169 aa9.42□□□□□ -0.9
PCNX4-204ENST00000406949 RNF114Q9Y508 228 aa9.42□□□□□ -0.9
PCNX4-204ENST00000406949 TMEM189A5PLL7 270 aa9.41□□□□□ -0.9
PCNX4-204ENST00000406949 SHANK2-AS3Q9BTD1 123 aa9.41□□□□□ -0.9
PCNX4-204ENST00000406949 COL25A1Q9BXS0 654 aaPredicted RBP9.41□□□□□ -0.9
PCNX4-204ENST00000406949 TRAV30A0A087WSZ9 112 aa9.41□□□□□ -0.9
PCNX4-204ENST00000406949 FAM162BQ5T6X4 162 aa9.41□□□□□ -0.9
PCNX4-204ENST00000406949 GDF5OSQ5U4N7 250 aa9.41□□□□□ -0.9
PCNX4-204ENST00000406949 NDFIP1Q9BT67 221 aa9.41□□□□□ -0.9
PCNX4-204ENST00000406949 RABAC1Q9UI14 185 aa9.41□□□□□ -0.9
PCNX4-204ENST00000406949 NDUFB8O95169 186 aa9.4□□□□□ -0.9
PCNX4-204ENST00000406949 TRBV19A0A075B6N1 114 aa9.4□□□□□ -0.9
PCNX4-204ENST00000406949 ARMS2P0C7Q2 107 aa9.4□□□□□ -0.9
PCNX4-204ENST00000406949 RPL7P18124 248 aaKnown RBP9.4□□□□□ -0.9
PCNX4-204ENST00000406949 TMEM219Q86XT9 240 aa9.4□□□□□ -0.9
PCNX4-204ENST00000406949 ZNF491Q8N8L2 437 aa9.4□□□□□ -0.9
PCNX4-204ENST00000406949 RNF5Q99942 180 aa9.4□□□□□ -0.9
PCNX4-204ENST00000406949 UQCR10Q9UDW1 63 aa9.4□□□□□ -0.9
PCNX4-204ENST00000406949 NAV2Q8IVL1 2488 aa9.4□□□□□ -0.9
PCNX4-204ENST00000406949 FAM181BA6NEQ2 426 aa9.4□□□□□ -0.91
PCNX4-204ENST00000406949 BCL6BQ8N143 479 aaPredicted RBP9.4□□□□□ -0.91
PCNX4-204ENST00000406949 CLEC19AQ6UXS0 136 aa9.39□□□□□ -0.91
PCNX4-204ENST00000406949 OR8A1Q8NGG7 326 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms