RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 SLC25A5P05141 298 aaKnown RBP2.83□□□□□ -1.96
RTN4-208ENST00000404909 IGLC2P0DOY2 106 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 GALR1P47211 349 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 GNG5P63218 68 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 NSUN5P1Q3KNT7 163 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 GPHB5Q86YW7 130 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 SGK494Q96LW2 274 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 NIPSNAP3BQ9BS92 247 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 ELOVL1Q9BW60 279 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 RHPN1-AS1Q9BWJ2 59 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 PARLQ9H300 379 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 Q9H3A6 140 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 AURKAIP1Q9NWT8 199 aaPredicted RBP2.83□□□□□ -1.96
RTN4-208ENST00000404909 RNF24Q9Y225 148 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 TRRAPQ9Y4A5 3859 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 VWFP04275 2813 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 TRBV19A0A075B6N1 114 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 A0A1W2PS18 150 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 LINC01619G3V211 115 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 TMEM250H0YL14 139 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 FAM90A2PQ658T7 463 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 SIGLEC15Q6ZMC9 328 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 SVBPQ8N300 66 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 CMTM2Q8TAZ6 248 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 SUN5Q8TC36 379 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 LINC00479Q96M42 142 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 UFC1Q9Y3C8 167 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 TSSC4Q9Y5U2 329 aaPredicted RBP2.83□□□□□ -1.96
RTN4-208ENST00000404909 SMAD5-AS1Q9Y6J3 95 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 TRAV34A0A0B4J273 112 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 IGHV7-4-1A0A0J9YVY3 117 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 PGPEP1LA6NFU8 196 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 F6UZH7 168 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 M0R3E3 92 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 MRPS12O15235 138 aaKnown RBP2.83□□□□□ -1.96
RTN4-208ENST00000404909 AKR1C3P42330 323 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 PROK1P58294 105 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 ATRAIDQ6UW56 229 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 CCDC28AQ8IWP9 274 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.83□□□□□ -1.96
RTN4-208ENST00000404909 WIPF2Q8TF74 440 aaPredicted RBP2.83□□□□□ -1.96
RTN4-208ENST00000404909 GRAMD2BQ96HH9 432 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 TXNDC17Q9BRA2 123 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 NKX6-2Q9C056 277 aaPredicted RBP2.83□□□□□ -1.96
RTN4-208ENST00000404909 AAMDCQ9H7C9 122 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 TMEM213A2RRL7 107 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 RPL35P42766 123 aaKnown RBP2.83□□□□□ -1.96
RTN4-208ENST00000404909 C1orf194Q5T5A4 169 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 WFDC3Q8IUB2 231 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 GBGT1Q8N5D6 347 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 RAX2Q96IS3 184 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 CARHSP1Q9Y2V2 147 aaKnown RBP2.83□□□□□ -1.96
RTN4-208ENST00000404909 ARL2-SNX15V9GYD0 113 aa2.83□□□□□ -1.96
RTN4-208ENST00000404909 HELTA6NFD8 242 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 CCL24O00175 119 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 PEX7O00628 323 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 CHEK1O14757 476 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 SNAPINO95295 136 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 HLA-DMBP28068 263 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 TFPI2P48307 235 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 ADIRFQ15847 76 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 TMEM241Q24JQ0 296 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 C10orf91Q5T1B1 145 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 C16orf54Q6UWD8 224 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 GOLT1AQ6ZVE7 132 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 C1QL4Q86Z23 238 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 RNF182Q8N6D2 247 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.82□□□□□ -1.96
RTN4-208ENST00000404909 C5orf17Q8NAS9 161 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 NHLRC2Q8NBF2 726 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 DLX4Q92988 240 aaPredicted RBP2.82□□□□□ -1.96
RTN4-208ENST00000404909 TVP23CQ96ET8 276 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 GPR82Q96P67 336 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 OTORQ9NRC9 128 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 SMPXQ9UHP9 88 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 EPDR1Q9UM22 224 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 U3KQE9 123 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 TRAV8-1A0A0A6YYK1 113 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 ZNF705FA8MVS1 300 aaPredicted RBP2.82□□□□□ -1.96
RTN4-208ENST00000404909 K7EMT4 169 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 TSPAN4O14817 238 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 CBLN1P23435 193 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 MYCNOSP40205 109 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 KRTAP10-3P60369 221 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 PSG9Q00887 426 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 KLF5Q13887 457 aaPredicted RBP2.82□□□□□ -1.96
RTN4-208ENST00000404909 PDE6HQ13956 83 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 AWAT1Q58HT5 328 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 TCF24Q7RTU0 167 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 CLRN3Q8NCR9 226 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 GLMPQ8WWB7 406 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 C16orf92Q96LL3 132 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 RPS10P5Q9NQ39 176 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 FBN1P35555 2871 aaKnown RBP2.82□□□□□ -1.96
RTN4-208ENST00000404909 TRBV20OR9-2A0A075B6H5 130 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 C2orf70A6NJV1 201 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 M0QZ24 198 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 ISLRO14498 428 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 TCRAP04437 139 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms