RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 SLC39A9Q9NUM3 307 aa13.14□□□□□ -0.31
PTPRN2-204ENST00000404321 ELOA3CA0A087WX78 387 aaPredicted RBP13.13□□□□□ -0.31
PTPRN2-204ENST00000404321 A0A087X0K7 114 aa13.13□□□□□ -0.31
PTPRN2-204ENST00000404321 CNN1P51911 297 aaKnown RBP13.13□□□□□ -0.31
PTPRN2-204ENST00000404321 B2MP61769 119 aa13.13□□□□□ -0.31
PTPRN2-204ENST00000404321 CYCSP99999 105 aaKnown RBP13.13□□□□□ -0.31
PTPRN2-204ENST00000404321 CLINT1Q14677 625 aa13.13□□□□□ -0.31
PTPRN2-204ENST00000404321 ATP6V1FQ16864 119 aa13.13□□□□□ -0.31
PTPRN2-204ENST00000404321 SPATA31B1PQ5VZV4 182 aa13.13□□□□□ -0.31
PTPRN2-204ENST00000404321 SLC25A31Q9H0C2 315 aa13.13□□□□□ -0.31
PTPRN2-204ENST00000404321 DNAJC4Q9NNZ3 241 aa13.13□□□□□ -0.31
PTPRN2-204ENST00000404321 CXCL3P19876 107 aa13.12□□□□□ -0.31
PTPRN2-204ENST00000404321 CLUHP3Q96NS8 147 aa13.12□□□□□ -0.31
PTPRN2-204ENST00000404321 MFFQ9GZY8 342 aa13.12□□□□□ -0.31
PTPRN2-204ENST00000404321 PXMP4Q9Y6I8 212 aa13.12□□□□□ -0.31
PTPRN2-204ENST00000404321 RPL29P47914 159 aaKnown RBP13.11□□□□□ -0.31
PTPRN2-204ENST00000404321 BPIFA4PQ86YQ2 179 aa13.11□□□□□ -0.31
PTPRN2-204ENST00000404321 OR1L4Q8NGR5 311 aa13.11□□□□□ -0.31
PTPRN2-204ENST00000404321 RNF24Q9Y225 148 aa13.11□□□□□ -0.31
PTPRN2-204ENST00000404321 KLK5Q9Y337 293 aaPredicted RBP13.11□□□□□ -0.31
PTPRN2-204ENST00000404321 ALG5Q9Y673 324 aa13.11□□□□□ -0.31
PTPRN2-204ENST00000404321 SLC17A3O00476 420 aa13.1□□□□□ -0.31
PTPRN2-204ENST00000404321 EMP1P54849 157 aa13.1□□□□□ -0.31
PTPRN2-204ENST00000404321 HIST1H1AQ02539 215 aaPredicted RBP13.1□□□□□ -0.31
PTPRN2-204ENST00000404321 GCSAMLQ5JQS6 135 aa13.1□□□□□ -0.31
PTPRN2-204ENST00000404321 AMTNQ6UX39 209 aa13.1□□□□□ -0.31
PTPRN2-204ENST00000404321 ZNF767PQ75MW2 155 aa13.1□□□□□ -0.31
PTPRN2-204ENST00000404321 RNF126Q9BV68 326 aa13.1□□□□□ -0.31
PTPRN2-204ENST00000404321 NPCDR1Q9BY65 106 aa13.1□□□□□ -0.31
PTPRN2-204ENST00000404321 CELA1Q9UNI1 258 aa13.1□□□□□ -0.31
PTPRN2-204ENST00000404321 HYDINQ4G0P3 5121 aa13.09□□□□□ -0.31
PTPRN2-204ENST00000404321 H3BQ15 152 aa13.09□□□□□ -0.31
PTPRN2-204ENST00000404321 M0R2Z0 102 aa13.09□□□□□ -0.31
PTPRN2-204ENST00000404321 DUSP14O95147 198 aaKnown RBP13.09□□□□□ -0.31
PTPRN2-204ENST00000404321 MPC2O95563 127 aa13.09□□□□□ -0.31
PTPRN2-204ENST00000404321 PSG3Q16557 428 aa13.09□□□□□ -0.31
PTPRN2-204ENST00000404321 SPINK13Q1W4C9 94 aa13.09□□□□□ -0.31
PTPRN2-204ENST00000404321 ZNF705AQ6ZN79 300 aaPredicted RBP13.09□□□□□ -0.31
PTPRN2-204ENST00000404321 OR11H7Q8NGC8 314 aa13.09□□□□□ -0.31
PTPRN2-204ENST00000404321 PFDN5Q99471 154 aa13.09□□□□□ -0.31
PTPRN2-204ENST00000404321 ZNF705FA8MVS1 300 aaPredicted RBP13.08□□□□□ -0.31
PTPRN2-204ENST00000404321 MPDU1O75352 247 aa13.08□□□□□ -0.31
PTPRN2-204ENST00000404321 PTTG1O95997 202 aa13.08□□□□□ -0.31
PTPRN2-204ENST00000404321 LCN15Q6UWW0 184 aa13.08□□□□□ -0.31
PTPRN2-204ENST00000404321 C1orf158Q8N1D5 194 aa13.08□□□□□ -0.31
PTPRN2-204ENST00000404321 OR8A1Q8NGG7 326 aa13.08□□□□□ -0.31
PTPRN2-204ENST00000404321 RPUSD4Q96CM3 377 aaKnown RBP13.08□□□□□ -0.31
PTPRN2-204ENST00000404321 ZNF331Q9NQX6 463 aaPredicted RBP13.08□□□□□ -0.31
PTPRN2-204ENST00000404321 MBD2Q9UBB5 411 aa13.08□□□□□ -0.31
PTPRN2-204ENST00000404321 A8MTW9 85 aa13.07□□□□□ -0.32
PTPRN2-204ENST00000404321 LY6G6CO95867 125 aa13.07□□□□□ -0.32
PTPRN2-204ENST00000404321 IGLC2P0DOY2 106 aa13.07□□□□□ -0.32
PTPRN2-204ENST00000404321 CXCL2P19875 107 aa13.07□□□□□ -0.32
PTPRN2-204ENST00000404321 RHOBP62745 196 aa13.07□□□□□ -0.32
PTPRN2-204ENST00000404321 Q6ZTC4 211 aa13.07□□□□□ -0.32
PTPRN2-204ENST00000404321 CHAC2Q8WUX2 184 aa13.07□□□□□ -0.32
PTPRN2-204ENST00000404321 SMIM3Q9BZL3 60 aa13.07□□□□□ -0.32
PTPRN2-204ENST00000404321 HRH4Q9H3N8 390 aa13.07□□□□□ -0.32
PTPRN2-204ENST00000404321 GOLT1BQ9Y3E0 138 aa13.07□□□□□ -0.32
PTPRN2-204ENST00000404321 PET100P0DJ07 73 aa13.07□□□□□ -0.32
PTPRN2-204ENST00000404321 BAP18Q8IXM2 172 aa13.07□□□□□ -0.32
PTPRN2-204ENST00000404321 LINC00476Q8WZB0 136 aa13.07□□□□□ -0.32
PTPRN2-204ENST00000404321 SLC50A1Q9BRV3 221 aa13.07□□□□□ -0.32
PTPRN2-204ENST00000404321 DNAH1Q9P2D7 4330 aa13.06□□□□□ -0.32
PTPRN2-204ENST00000404321 TRAV12-2A0A075B6T6 113 aa13.06□□□□□ -0.32
PTPRN2-204ENST00000404321 PRAC2D3DTV9 90 aa13.06□□□□□ -0.32
PTPRN2-204ENST00000404321 NEU1Q99519 415 aa13.06□□□□□ -0.32
PTPRN2-204ENST00000404321 LYSTQ99698 3801 aa13.06□□□□□ -0.32
PTPRN2-204ENST00000404321 TMEM208Q9BTX3 173 aa13.06□□□□□ -0.32
PTPRN2-204ENST00000404321 WDR61Q9GZS3 305 aaKnown RBP13.06□□□□□ -0.32
PTPRN2-204ENST00000404321 PPP1R14DQ9NXH3 145 aa13.06□□□□□ -0.32
PTPRN2-204ENST00000404321 ZNF586Q9NXT0 402 aa13.06□□□□□ -0.32
PTPRN2-204ENST00000404321 HSPB11Q9Y547 144 aa13.06□□□□□ -0.32
PTPRN2-204ENST00000404321 ALMS1Q8TCU4 4167 aa13.05□□□□□ -0.32
PTPRN2-204ENST00000404321 CRXO43186 299 aaPredicted RBP13.05□□□□□ -0.32
PTPRN2-204ENST00000404321 PRM2P04554 102 aa13.05□□□□□ -0.32
PTPRN2-204ENST00000404321 PYYP10082 97 aa13.05□□□□□ -0.32
PTPRN2-204ENST00000404321 RPL12P30050 165 aaKnown RBP13.05□□□□□ -0.32
PTPRN2-204ENST00000404321 SAT2Q96F10 170 aaPredicted RBP13.05□□□□□ -0.32
PTPRN2-204ENST00000404321 IGF2BP2-AS1Q96M15 143 aa13.05□□□□□ -0.32
PTPRN2-204ENST00000404321 ATP5SQ99766 215 aa13.05□□□□□ -0.32
PTPRN2-204ENST00000404321 RFNGQ9Y644 331 aa13.05□□□□□ -0.32
PTPRN2-204ENST00000404321 SMIM9A6NGZ8 99 aa13.04□□□□□ -0.32
PTPRN2-204ENST00000404321 BOLA2-SMG1P6H3BVE0 249 aa13.04□□□□□ -0.32
PTPRN2-204ENST00000404321 FCN2Q15485 313 aa13.04□□□□□ -0.32
PTPRN2-204ENST00000404321 C12orf74Q32Q52 190 aa13.04□□□□□ -0.32
PTPRN2-204ENST00000404321 MIR17HGQ75NE6 70 aa13.04□□□□□ -0.32
PTPRN2-204ENST00000404321 C2CD4CQ8TF44 421 aa13.04□□□□□ -0.32
PTPRN2-204ENST00000404321 IGLL5B9A064 214 aa13.03□□□□□ -0.32
PTPRN2-204ENST00000404321 INSP01308 110 aa13.03□□□□□ -0.32
PTPRN2-204ENST00000404321 HBE1P02100 147 aa13.03□□□□□ -0.32
PTPRN2-204ENST00000404321 PARD6GQ9BYG4 376 aaPredicted RBP13.03□□□□□ -0.32
PTPRN2-204ENST00000404321 MED28Q9H204 178 aa13.03□□□□□ -0.32
PTPRN2-204ENST00000404321 LOC102723971A0A1B0GUV8 181 aa13.02□□□□□ -0.33
PTPRN2-204ENST00000404321 ZNF705GA8MUZ8 300 aaPredicted RBP13.02□□□□□ -0.33
PTPRN2-204ENST00000404321 AMBPP02760 352 aa13.02□□□□□ -0.33
PTPRN2-204ENST00000404321 GUK1Q16774 197 aa13.02□□□□□ -0.33
PTPRN2-204ENST00000404321 RRN3P1Q2M238 152 aa13.02□□□□□ -0.33
PTPRN2-204ENST00000404321 OR10J6PQ8NGY7 276 aa13.02□□□□□ -0.33
PTPRN2-204ENST00000404321 BLNKQ8WV28 456 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms